Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2731:A2759
Extra
PDB:
ATOM 1 O3' G A2730 -85.739 -85.910 -50.995 1.00 0.17 O
ATOM 2 P A A2731 -87.209 -85.411 -51.415 1.00 0.04 P
ATOM 3 OP1 A A2731 -87.857 -86.536 -52.134 1.00 0.04 O
ATOM 4 OP2 A A2731 -87.057 -84.095 -52.112 1.00 0.04 O
ATOM 5 O5' A A2731 -87.906 -85.194 -50.011 1.00 0.04 O
ATOM 6 C5' A A2731 -87.666 -86.101 -48.957 1.00 0.04 C
ATOM 7 C4' A A2731 -87.845 -85.461 -47.601 1.00 0.04 C
ATOM 8 O4' A A2731 -86.689 -84.666 -47.254 1.00 0.04 O
ATOM 9 C3' A A2731 -88.973 -84.475 -47.462 1.00 0.04 C
ATOM 10 O3' A A2731 -90.235 -85.076 -47.389 1.00 0.04 O
ATOM 11 C2' A A2731 -88.572 -83.779 -46.194 1.00 0.04 C
ATOM 12 O2' A A2731 -88.691 -84.666 -45.096 1.00 0.04 O
ATOM 13 C1' A A2731 -87.103 -83.572 -46.472 1.00 0.04 C
ATOM 14 N9 A A2731 -86.872 -82.353 -47.240 1.00 0.01 N
ATOM 15 C8 A A2731 -86.724 -82.268 -48.582 1.00 0.01 C
ATOM 16 N7 A A2731 -86.522 -81.052 -49.000 1.00 0.01 N
ATOM 17 C5 A A2731 -86.541 -80.293 -47.848 1.00 0.01 C
ATOM 18 C6 A A2731 -86.385 -78.928 -47.609 1.00 0.01 C
ATOM 19 N6 A A2731 -86.163 -78.038 -48.564 1.00 0.01 N
ATOM 20 N1 A A2731 -86.451 -78.484 -46.354 1.00 0.01 N
ATOM 21 C2 A A2731 -86.663 -79.367 -45.391 1.00 0.01 C
ATOM 22 N3 A A2731 -86.826 -80.684 -45.490 1.00 0.01 N
ATOM 23 C4 A A2731 -86.757 -81.088 -46.759 1.00 0.01 C
ATOM 24 P U A2732 -91.519 -84.174 -47.556 1.00 0.01 P
ATOM 25 OP1 U A2732 -92.692 -85.048 -47.335 1.00 0.01 O
ATOM 26 OP2 U A2732 -91.383 -83.485 -48.852 1.00 0.01 O
ATOM 27 O5' U A2732 -91.364 -83.138 -46.343 1.00 0.01 O
TER
ATOM 1 O3' A B2758 -79.661 -71.726 -44.079 1.00 0.01 O
ATOM 2 P A B2759 -80.365 -73.084 -43.589 1.00 0.01 P
ATOM 3 OP1 A B2759 -79.269 -73.978 -43.103 1.00 0.01 O
ATOM 4 OP2 A B2759 -81.235 -73.558 -44.682 1.00 0.01 O
ATOM 5 O5' A B2759 -81.261 -72.601 -42.371 1.00 0.01 O
ATOM 6 C5' A B2759 -80.697 -72.383 -41.090 1.00 0.01 C
ATOM 7 C4' A B2759 -81.743 -72.469 -40.024 1.00 0.01 C
ATOM 8 O4' A B2759 -82.956 -71.850 -40.519 1.00 0.01 O
ATOM 9 C3' A B2759 -82.175 -73.877 -39.615 1.00 0.01 C
ATOM 10 O3' A B2759 -81.359 -74.450 -38.594 1.00 0.01 O
ATOM 11 C2' A B2759 -83.608 -73.645 -39.180 1.00 0.01 C
ATOM 12 O2' A B2759 -83.646 -72.985 -37.937 1.00 0.01 O
ATOM 13 C1' A B2759 -84.067 -72.649 -40.214 1.00 0.01 C
ATOM 14 N9 A B2759 -84.508 -73.299 -41.445 1.00 0.01 N
ATOM 15 C8 A B2759 -84.373 -72.774 -42.690 1.00 0.01 C
ATOM 16 N7 A B2759 -84.823 -73.532 -43.647 1.00 0.01 N
ATOM 17 C5 A B2759 -85.274 -74.631 -42.976 1.00 0.01 C
ATOM 18 C6 A B2759 -85.847 -75.783 -43.461 1.00 0.01 C
ATOM 19 N6 A B2759 -86.047 -75.962 -44.746 1.00 0.01 N
ATOM 20 N1 A B2759 -86.195 -76.725 -42.571 1.00 0.01 N
ATOM 21 C2 A B2759 -85.957 -76.491 -41.263 1.00 0.01 C
ATOM 22 N3 A B2759 -85.411 -75.429 -40.668 1.00 0.01 N
ATOM 23 C4 A B2759 -85.087 -74.521 -41.608 1.00 0.01 C
ATOM 24 P C B2760 -80.179 -75.481 -38.960 1.00 0.01 P
ATOM 25 OP1 C B2760 -79.018 -75.170 -38.099 1.00 0.01 O
ATOM 26 OP2 C B2760 -79.996 -75.434 -40.423 1.00 0.01 O
ATOM 27 O5' C B2760 -80.791 -76.885 -38.539 1.00 0.01 O
TER
ATOM 2 P A A2731 -87.209 -85.411 -51.415 1.00 0.04 P
ATOM 3 OP1 A A2731 -87.857 -86.536 -52.134 1.00 0.04 O
ATOM 4 OP2 A A2731 -87.057 -84.095 -52.112 1.00 0.04 O
ATOM 5 O5' A A2731 -87.906 -85.194 -50.011 1.00 0.04 O
ATOM 6 C5' A A2731 -87.666 -86.101 -48.957 1.00 0.04 C
ATOM 7 C4' A A2731 -87.845 -85.461 -47.601 1.00 0.04 C
ATOM 8 O4' A A2731 -86.689 -84.666 -47.254 1.00 0.04 O
ATOM 9 C3' A A2731 -88.973 -84.475 -47.462 1.00 0.04 C
ATOM 10 O3' A A2731 -90.235 -85.076 -47.389 1.00 0.04 O
ATOM 11 C2' A A2731 -88.572 -83.779 -46.194 1.00 0.04 C
ATOM 12 O2' A A2731 -88.691 -84.666 -45.096 1.00 0.04 O
ATOM 13 C1' A A2731 -87.103 -83.572 -46.472 1.00 0.04 C
ATOM 14 N9 A A2731 -86.872 -82.353 -47.240 1.00 0.01 N
ATOM 15 C8 A A2731 -86.724 -82.268 -48.582 1.00 0.01 C
ATOM 16 N7 A A2731 -86.522 -81.052 -49.000 1.00 0.01 N
ATOM 17 C5 A A2731 -86.541 -80.293 -47.848 1.00 0.01 C
ATOM 18 C6 A A2731 -86.385 -78.928 -47.609 1.00 0.01 C
ATOM 19 N6 A A2731 -86.163 -78.038 -48.564 1.00 0.01 N
ATOM 20 N1 A A2731 -86.451 -78.484 -46.354 1.00 0.01 N
ATOM 21 C2 A A2731 -86.663 -79.367 -45.391 1.00 0.01 C
ATOM 22 N3 A A2731 -86.826 -80.684 -45.490 1.00 0.01 N
ATOM 23 C4 A A2731 -86.757 -81.088 -46.759 1.00 0.01 C
ATOM 24 P U A2732 -91.519 -84.174 -47.556 1.00 0.01 P
ATOM 25 OP1 U A2732 -92.692 -85.048 -47.335 1.00 0.01 O
ATOM 26 OP2 U A2732 -91.383 -83.485 -48.852 1.00 0.01 O
ATOM 27 O5' U A2732 -91.364 -83.138 -46.343 1.00 0.01 O
TER
ATOM 1 O3' A B2758 -79.661 -71.726 -44.079 1.00 0.01 O
ATOM 2 P A B2759 -80.365 -73.084 -43.589 1.00 0.01 P
ATOM 3 OP1 A B2759 -79.269 -73.978 -43.103 1.00 0.01 O
ATOM 4 OP2 A B2759 -81.235 -73.558 -44.682 1.00 0.01 O
ATOM 5 O5' A B2759 -81.261 -72.601 -42.371 1.00 0.01 O
ATOM 6 C5' A B2759 -80.697 -72.383 -41.090 1.00 0.01 C
ATOM 7 C4' A B2759 -81.743 -72.469 -40.024 1.00 0.01 C
ATOM 8 O4' A B2759 -82.956 -71.850 -40.519 1.00 0.01 O
ATOM 9 C3' A B2759 -82.175 -73.877 -39.615 1.00 0.01 C
ATOM 10 O3' A B2759 -81.359 -74.450 -38.594 1.00 0.01 O
ATOM 11 C2' A B2759 -83.608 -73.645 -39.180 1.00 0.01 C
ATOM 12 O2' A B2759 -83.646 -72.985 -37.937 1.00 0.01 O
ATOM 13 C1' A B2759 -84.067 -72.649 -40.214 1.00 0.01 C
ATOM 14 N9 A B2759 -84.508 -73.299 -41.445 1.00 0.01 N
ATOM 15 C8 A B2759 -84.373 -72.774 -42.690 1.00 0.01 C
ATOM 16 N7 A B2759 -84.823 -73.532 -43.647 1.00 0.01 N
ATOM 17 C5 A B2759 -85.274 -74.631 -42.976 1.00 0.01 C
ATOM 18 C6 A B2759 -85.847 -75.783 -43.461 1.00 0.01 C
ATOM 19 N6 A B2759 -86.047 -75.962 -44.746 1.00 0.01 N
ATOM 20 N1 A B2759 -86.195 -76.725 -42.571 1.00 0.01 N
ATOM 21 C2 A B2759 -85.957 -76.491 -41.263 1.00 0.01 C
ATOM 22 N3 A B2759 -85.411 -75.429 -40.668 1.00 0.01 N
ATOM 23 C4 A B2759 -85.087 -74.521 -41.608 1.00 0.01 C
ATOM 24 P C B2760 -80.179 -75.481 -38.960 1.00 0.01 P
ATOM 25 OP1 C B2760 -79.018 -75.170 -38.099 1.00 0.01 O
ATOM 26 OP2 C B2760 -79.996 -75.434 -40.423 1.00 0.01 O
ATOM 27 O5' C B2760 -80.791 -76.885 -38.539 1.00 0.01 O
TER
Atoms:
OP1: (-87.857,-86.536,-52.134)
OP2: (-87.057,-84.095,-52.112)
C3': (-88.973,-84.475,-47.462)
C1': (-87.103,-83.572,-46.472)
C5': (-87.666,-86.101,-48.957)
O4': (-86.689,-84.666,-47.254)
C8: (-86.724,-82.268,-48.582)
O2': (-88.691,-84.666,-45.096)
C6: (-86.385,-78.928,-47.609)
C5: (-86.541,-80.293,-47.848)
C4: (-86.757,-81.088,-46.759)
P: (-87.209,-85.411,-51.415)
C4': (-87.845,-85.461,-47.601)
C2': (-88.572,-83.779,-46.194)
C2: (-86.663,-79.367,-45.391)
N1: (-86.451,-78.484,-46.354)
N3: (-86.826,-80.684,-45.490)
N6: (-86.163,-78.038,-48.564)
N7: (-86.522,-81.052,-49.000)
N9: (-86.872,-82.353,-47.240)
O5': (-87.906,-85.194,-50.011)
O3': (-90.235,-85.076,-47.389)
OP2: (-87.057,-84.095,-52.112)
C3': (-88.973,-84.475,-47.462)
C1': (-87.103,-83.572,-46.472)
C5': (-87.666,-86.101,-48.957)
O4': (-86.689,-84.666,-47.254)
C8: (-86.724,-82.268,-48.582)
O2': (-88.691,-84.666,-45.096)
C6: (-86.385,-78.928,-47.609)
C5: (-86.541,-80.293,-47.848)
C4: (-86.757,-81.088,-46.759)
P: (-87.209,-85.411,-51.415)
C4': (-87.845,-85.461,-47.601)
C2': (-88.572,-83.779,-46.194)
C2: (-86.663,-79.367,-45.391)
N1: (-86.451,-78.484,-46.354)
N3: (-86.826,-80.684,-45.490)
N6: (-86.163,-78.038,-48.564)
N7: (-86.522,-81.052,-49.000)
N9: (-86.872,-82.353,-47.240)
O5': (-87.906,-85.194,-50.011)
O3': (-90.235,-85.076,-47.389)
OP1: (-79.269,-73.978,-43.103)
OP2: (-81.235,-73.558,-44.682)
C3': (-82.175,-73.877,-39.615)
C1': (-84.067,-72.649,-40.214)
C5': (-80.697,-72.383,-41.090)
O4': (-82.956,-71.850,-40.519)
C8: (-84.373,-72.774,-42.690)
O2': (-83.646,-72.985,-37.937)
C6: (-85.847,-75.783,-43.461)
C5: (-85.274,-74.631,-42.976)
C4: (-85.087,-74.521,-41.608)
P: (-80.365,-73.084,-43.589)
C4': (-81.743,-72.469,-40.024)
C2': (-83.608,-73.645,-39.180)
C2: (-85.957,-76.491,-41.263)
N1: (-86.195,-76.725,-42.571)
N3: (-85.411,-75.429,-40.668)
N6: (-86.047,-75.962,-44.746)
N7: (-84.823,-73.532,-43.647)
N9: (-84.508,-73.299,-41.445)
O5': (-81.261,-72.601,-42.371)
O3': (-81.359,-74.450,-38.594)
OP2: (-81.235,-73.558,-44.682)
C3': (-82.175,-73.877,-39.615)
C1': (-84.067,-72.649,-40.214)
C5': (-80.697,-72.383,-41.090)
O4': (-82.956,-71.850,-40.519)
C8: (-84.373,-72.774,-42.690)
O2': (-83.646,-72.985,-37.937)
C6: (-85.847,-75.783,-43.461)
C5: (-85.274,-74.631,-42.976)
C4: (-85.087,-74.521,-41.608)
P: (-80.365,-73.084,-43.589)
C4': (-81.743,-72.469,-40.024)
C2': (-83.608,-73.645,-39.180)
C2: (-85.957,-76.491,-41.263)
N1: (-86.195,-76.725,-42.571)
N3: (-85.411,-75.429,-40.668)
N6: (-86.047,-75.962,-44.746)
N7: (-84.823,-73.532,-43.647)
N9: (-84.508,-73.299,-41.445)
O5': (-81.261,-72.601,-42.371)
O3': (-81.359,-74.450,-38.594)
Image (generated by PyMOL):