Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2476:2510
Extra
PDB:
ATOM 1 O3' U A 475 -87.866 31.097 30.073 1.00103.66 O
ATOM 2 P A A 476 -88.369 29.589 30.410 1.00110.41 P
ATOM 3 OP1 A A 476 -87.191 28.848 30.933 1.00108.96 O
ATOM 4 OP2 A A 476 -89.064 29.067 29.190 1.00111.98 O
ATOM 5 O5' A A 476 -89.432 29.811 31.578 1.00110.49 O
ATOM 6 C5' A A 476 -90.826 29.781 31.315 1.00111.97 C
ATOM 7 C4' A A 476 -91.458 31.137 31.503 1.00112.46 C
ATOM 8 O4' A A 476 -90.921 32.061 30.531 1.00112.75 O
ATOM 9 C3' A A 476 -92.963 31.193 31.297 1.00114.04 C
ATOM 10 O3' A A 476 -93.673 30.853 32.464 1.00113.83 O
ATOM 11 C2' A A 476 -93.208 32.620 30.840 1.00114.71 C
ATOM 12 O2' A A 476 -93.275 33.499 31.952 1.00113.98 O
ATOM 13 C1' A A 476 -91.931 32.921 30.063 1.00114.11 C
ATOM 14 N9 A A 476 -92.091 32.701 28.619 1.00115.39 N
ATOM 15 C8 A A 476 -91.343 31.853 27.848 1.00115.25 C
ATOM 16 N7 A A 476 -91.687 31.850 26.592 1.00116.60 N
ATOM 17 C5 A A 476 -92.702 32.778 26.538 1.00117.67 C
ATOM 18 C6 A A 476 -93.473 33.214 25.471 1.00119.34 C
ATOM 19 N6 A A 476 -93.293 32.747 24.236 1.00120.18 N
ATOM 20 N1 A A 476 -94.424 34.140 25.735 1.00120.12 N
ATOM 21 C2 A A 476 -94.577 34.586 26.991 1.00119.26 C
ATOM 22 N3 A A 476 -93.907 34.238 28.084 1.00117.68 N
ATOM 23 C4 A A 476 -92.973 33.319 27.776 1.00116.95 C
ATOM 24 P A A 477 -95.072 30.102 32.352 1.00101.47 P
ATOM 25 OP1 A A 477 -95.425 29.617 33.711 1.00100.79 O
ATOM 26 OP2 A A 477 -94.946 29.122 31.257 1.00102.15 O
ATOM 27 O5' A A 477 -96.051 31.271 31.920 1.00102.81 O
TER
ATOM 1 O3' G B 509 -102.546 37.731 15.956 1.00146.25 O
ATOM 2 P A B 510 -102.285 39.099 16.754 1.00118.59 P
ATOM 3 OP1 A B 510 -103.571 39.485 17.384 1.00118.54 O
ATOM 4 OP2 A B 510 -101.646 40.043 15.803 1.00118.74 O
ATOM 5 O5' A B 510 -101.244 38.675 17.876 1.00118.07 O
ATOM 6 C5' A B 510 -100.771 39.623 18.817 1.00117.60 C
ATOM 7 C4' A B 510 -101.289 39.338 20.204 1.00117.22 C
ATOM 8 O4' A B 510 -101.225 37.913 20.475 1.00117.23 O
ATOM 9 C3' A B 510 -100.511 39.984 21.340 1.00116.66 C
ATOM 10 O3' A B 510 -100.926 41.315 21.582 1.00116.53 O
ATOM 11 C2' A B 510 -100.762 39.043 22.520 1.00116.37 C
ATOM 12 O2' A B 510 -102.007 39.331 23.142 1.00116.32 O
ATOM 13 C1' A B 510 -100.874 37.685 21.825 1.00116.73 C
ATOM 14 N9 A B 510 -99.608 36.917 21.856 1.00116.59 N
ATOM 15 C8 A B 510 -99.035 36.317 20.758 1.00116.93 C
ATOM 16 N7 A B 510 -97.923 35.673 21.002 1.00116.73 N
ATOM 17 C5 A B 510 -97.750 35.841 22.365 1.00116.22 C
ATOM 18 C6 A B 510 -96.742 35.380 23.216 1.00115.81 C
ATOM 19 N6 A B 510 -95.711 34.642 22.802 1.00115.85 N
ATOM 20 N1 A B 510 -96.851 35.711 24.516 1.00115.35 N
ATOM 21 C2 A B 510 -97.897 36.451 24.914 1.00115.31 C
ATOM 22 N3 A B 510 -98.910 36.941 24.215 1.00115.67 N
ATOM 23 C4 A B 510 -98.780 36.597 22.920 1.00116.12 C
ATOM 24 P A B 511 -99.880 42.532 21.521 1.00128.58 P
ATOM 25 OP1 A B 511 -100.658 43.767 21.713 1.00128.53 O
ATOM 26 OP2 A B 511 -99.078 42.376 20.282 1.00128.90 O
ATOM 27 O5' A B 511 -98.977 42.270 22.791 1.00128.03 O
TER
ATOM 2 P A A 476 -88.369 29.589 30.410 1.00110.41 P
ATOM 3 OP1 A A 476 -87.191 28.848 30.933 1.00108.96 O
ATOM 4 OP2 A A 476 -89.064 29.067 29.190 1.00111.98 O
ATOM 5 O5' A A 476 -89.432 29.811 31.578 1.00110.49 O
ATOM 6 C5' A A 476 -90.826 29.781 31.315 1.00111.97 C
ATOM 7 C4' A A 476 -91.458 31.137 31.503 1.00112.46 C
ATOM 8 O4' A A 476 -90.921 32.061 30.531 1.00112.75 O
ATOM 9 C3' A A 476 -92.963 31.193 31.297 1.00114.04 C
ATOM 10 O3' A A 476 -93.673 30.853 32.464 1.00113.83 O
ATOM 11 C2' A A 476 -93.208 32.620 30.840 1.00114.71 C
ATOM 12 O2' A A 476 -93.275 33.499 31.952 1.00113.98 O
ATOM 13 C1' A A 476 -91.931 32.921 30.063 1.00114.11 C
ATOM 14 N9 A A 476 -92.091 32.701 28.619 1.00115.39 N
ATOM 15 C8 A A 476 -91.343 31.853 27.848 1.00115.25 C
ATOM 16 N7 A A 476 -91.687 31.850 26.592 1.00116.60 N
ATOM 17 C5 A A 476 -92.702 32.778 26.538 1.00117.67 C
ATOM 18 C6 A A 476 -93.473 33.214 25.471 1.00119.34 C
ATOM 19 N6 A A 476 -93.293 32.747 24.236 1.00120.18 N
ATOM 20 N1 A A 476 -94.424 34.140 25.735 1.00120.12 N
ATOM 21 C2 A A 476 -94.577 34.586 26.991 1.00119.26 C
ATOM 22 N3 A A 476 -93.907 34.238 28.084 1.00117.68 N
ATOM 23 C4 A A 476 -92.973 33.319 27.776 1.00116.95 C
ATOM 24 P A A 477 -95.072 30.102 32.352 1.00101.47 P
ATOM 25 OP1 A A 477 -95.425 29.617 33.711 1.00100.79 O
ATOM 26 OP2 A A 477 -94.946 29.122 31.257 1.00102.15 O
ATOM 27 O5' A A 477 -96.051 31.271 31.920 1.00102.81 O
TER
ATOM 1 O3' G B 509 -102.546 37.731 15.956 1.00146.25 O
ATOM 2 P A B 510 -102.285 39.099 16.754 1.00118.59 P
ATOM 3 OP1 A B 510 -103.571 39.485 17.384 1.00118.54 O
ATOM 4 OP2 A B 510 -101.646 40.043 15.803 1.00118.74 O
ATOM 5 O5' A B 510 -101.244 38.675 17.876 1.00118.07 O
ATOM 6 C5' A B 510 -100.771 39.623 18.817 1.00117.60 C
ATOM 7 C4' A B 510 -101.289 39.338 20.204 1.00117.22 C
ATOM 8 O4' A B 510 -101.225 37.913 20.475 1.00117.23 O
ATOM 9 C3' A B 510 -100.511 39.984 21.340 1.00116.66 C
ATOM 10 O3' A B 510 -100.926 41.315 21.582 1.00116.53 O
ATOM 11 C2' A B 510 -100.762 39.043 22.520 1.00116.37 C
ATOM 12 O2' A B 510 -102.007 39.331 23.142 1.00116.32 O
ATOM 13 C1' A B 510 -100.874 37.685 21.825 1.00116.73 C
ATOM 14 N9 A B 510 -99.608 36.917 21.856 1.00116.59 N
ATOM 15 C8 A B 510 -99.035 36.317 20.758 1.00116.93 C
ATOM 16 N7 A B 510 -97.923 35.673 21.002 1.00116.73 N
ATOM 17 C5 A B 510 -97.750 35.841 22.365 1.00116.22 C
ATOM 18 C6 A B 510 -96.742 35.380 23.216 1.00115.81 C
ATOM 19 N6 A B 510 -95.711 34.642 22.802 1.00115.85 N
ATOM 20 N1 A B 510 -96.851 35.711 24.516 1.00115.35 N
ATOM 21 C2 A B 510 -97.897 36.451 24.914 1.00115.31 C
ATOM 22 N3 A B 510 -98.910 36.941 24.215 1.00115.67 N
ATOM 23 C4 A B 510 -98.780 36.597 22.920 1.00116.12 C
ATOM 24 P A B 511 -99.880 42.532 21.521 1.00128.58 P
ATOM 25 OP1 A B 511 -100.658 43.767 21.713 1.00128.53 O
ATOM 26 OP2 A B 511 -99.078 42.376 20.282 1.00128.90 O
ATOM 27 O5' A B 511 -98.977 42.270 22.791 1.00128.03 O
TER
Atoms:
OP1: (-87.191,28.848,30.933)
OP2: (-89.064,29.067,29.190)
C3': (-92.963,31.193,31.297)
C1': (-91.931,32.921,30.063)
C5': (-90.826,29.781,31.315)
O4': (-90.921,32.061,30.531)
C8: (-91.343,31.853,27.848)
O2': (-93.275,33.499,31.952)
C6: (-93.473,33.214,25.471)
C5: (-92.702,32.778,26.538)
C4: (-92.973,33.319,27.776)
P: (-88.369,29.589,30.410)
C4': (-91.458,31.137,31.503)
C2': (-93.208,32.620,30.840)
C2: (-94.577,34.586,26.991)
N1: (-94.424,34.140,25.735)
N3: (-93.907,34.238,28.084)
N6: (-93.293,32.747,24.236)
N7: (-91.687,31.850,26.592)
N9: (-92.091,32.701,28.619)
O5': (-89.432,29.811,31.578)
O3': (-93.673,30.853,32.464)
OP2: (-89.064,29.067,29.190)
C3': (-92.963,31.193,31.297)
C1': (-91.931,32.921,30.063)
C5': (-90.826,29.781,31.315)
O4': (-90.921,32.061,30.531)
C8: (-91.343,31.853,27.848)
O2': (-93.275,33.499,31.952)
C6: (-93.473,33.214,25.471)
C5: (-92.702,32.778,26.538)
C4: (-92.973,33.319,27.776)
P: (-88.369,29.589,30.410)
C4': (-91.458,31.137,31.503)
C2': (-93.208,32.620,30.840)
C2: (-94.577,34.586,26.991)
N1: (-94.424,34.140,25.735)
N3: (-93.907,34.238,28.084)
N6: (-93.293,32.747,24.236)
N7: (-91.687,31.850,26.592)
N9: (-92.091,32.701,28.619)
O5': (-89.432,29.811,31.578)
O3': (-93.673,30.853,32.464)
OP1: (-103.571,39.485,17.384)
OP2: (-101.646,40.043,15.803)
C3': (-100.511,39.984,21.340)
C1': (-100.874,37.685,21.825)
C5': (-100.771,39.623,18.817)
O4': (-101.225,37.913,20.475)
C8: (-99.035,36.317,20.758)
O2': (-102.007,39.331,23.142)
C6: (-96.742,35.380,23.216)
C5: (-97.750,35.841,22.365)
C4: (-98.780,36.597,22.920)
P: (-102.285,39.099,16.754)
C4': (-101.289,39.338,20.204)
C2': (-100.762,39.043,22.520)
C2: (-97.897,36.451,24.914)
N1: (-96.851,35.711,24.516)
N3: (-98.910,36.941,24.215)
N6: (-95.711,34.642,22.802)
N7: (-97.923,35.673,21.002)
N9: (-99.608,36.917,21.856)
O5': (-101.244,38.675,17.876)
O3': (-100.926,41.315,21.582)
OP2: (-101.646,40.043,15.803)
C3': (-100.511,39.984,21.340)
C1': (-100.874,37.685,21.825)
C5': (-100.771,39.623,18.817)
O4': (-101.225,37.913,20.475)
C8: (-99.035,36.317,20.758)
O2': (-102.007,39.331,23.142)
C6: (-96.742,35.380,23.216)
C5: (-97.750,35.841,22.365)
C4: (-98.780,36.597,22.920)
P: (-102.285,39.099,16.754)
C4': (-101.289,39.338,20.204)
C2': (-100.762,39.043,22.520)
C2: (-97.897,36.451,24.914)
N1: (-96.851,35.711,24.516)
N3: (-98.910,36.941,24.215)
N6: (-95.711,34.642,22.802)
N7: (-97.923,35.673,21.002)
N9: (-99.608,36.917,21.856)
O5': (-101.244,38.675,17.876)
O3': (-100.926,41.315,21.582)
Image (generated by PyMOL):