Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:9111:964
Extra
PDB:
ATOM 1 O3' U A 110 45.167 35.401 117.138 1.00 64.26 O
ATOM 2 P U A 111 46.122 34.142 116.901 1.00 64.53 P
ATOM 3 OP1 U A 111 45.388 33.207 116.000 1.00 62.58 O
ATOM 4 OP2 U A 111 46.618 33.672 118.221 1.00 63.44 O
ATOM 5 O5' U A 111 47.360 34.750 116.107 1.00 64.25 O
ATOM 6 C5' U A 111 47.193 35.314 114.793 1.00 61.30 C
ATOM 7 C4' U A 111 48.492 35.910 114.318 1.00 58.92 C
ATOM 8 O4' U A 111 48.833 37.057 115.133 1.00 59.00 O
ATOM 9 C3' U A 111 49.701 35.020 114.517 1.00 57.29 C
ATOM 10 O3' U A 111 49.766 34.017 113.515 1.00 55.42 O
ATOM 11 C2' U A 111 50.855 36.014 114.429 1.00 56.84 C
ATOM 12 O2' U A 111 51.210 36.304 113.097 1.00 55.97 O
ATOM 13 C1' U A 111 50.232 37.268 115.055 1.00 57.75 C
ATOM 14 N1 U A 111 50.742 37.636 116.385 1.00 58.57 N
ATOM 15 C2 U A 111 51.567 38.742 116.469 1.00 59.43 C
ATOM 16 O2 U A 111 51.854 39.428 115.508 1.00 60.84 O
ATOM 17 N3 U A 111 52.041 39.021 117.724 1.00 59.63 N
ATOM 18 C4 U A 111 51.778 38.328 118.882 1.00 59.41 C
ATOM 19 O4 U A 111 52.321 38.675 119.935 1.00 59.88 O
ATOM 20 C5 U A 111 50.901 37.212 118.718 1.00 59.12 C
ATOM 21 C6 U A 111 50.426 36.911 117.506 1.00 58.29 C
ATOM 22 P C A 112 50.182 32.524 113.921 1.00 54.48 P
ATOM 23 OP1 C A 112 50.094 31.682 112.704 1.00 54.36 O
ATOM 24 OP2 C A 112 49.411 32.151 115.132 1.00 55.26 O
ATOM 25 O5' C A 112 51.710 32.652 114.338 1.00 53.09 O
TER
ATOM 1 O3' C B 63 53.301 30.077 124.798 1.00 67.36 O
ATOM 2 P A B 64 52.407 31.402 124.629 1.00 69.84 P
ATOM 3 OP1 A B 64 51.908 31.786 125.979 1.00 69.86 O
ATOM 4 OP2 A B 64 51.434 31.178 123.522 1.00 69.34 O
ATOM 5 O5' A B 64 53.452 32.511 124.166 1.00 71.32 O
ATOM 6 C5' A B 64 54.758 32.607 124.775 1.00 74.28 C
ATOM 7 C4' A B 64 55.438 33.885 124.344 1.00 75.63 C
ATOM 8 O4' A B 64 55.588 33.886 122.905 1.00 77.04 O
ATOM 9 C3' A B 64 54.674 35.150 124.692 1.00 75.49 C
ATOM 10 O3' A B 64 55.018 35.471 126.057 1.00 75.06 O
ATOM 11 C2' A B 64 55.045 36.115 123.564 1.00 76.61 C
ATOM 12 O2' A B 64 56.279 36.771 123.770 1.00 80.39 O
ATOM 13 C1' A B 64 55.246 35.155 122.385 1.00 76.83 C
ATOM 14 N9 A B 64 54.175 34.948 121.409 1.00 76.24 N
ATOM 15 C8 A B 64 52.931 34.399 121.597 1.00 75.68 C
ATOM 16 N7 A B 64 52.263 34.215 120.483 1.00 75.63 N
ATOM 17 C5 A B 64 53.111 34.705 119.499 1.00 75.72 C
ATOM 18 C6 A B 64 53.000 34.775 118.095 1.00 75.63 C
ATOM 19 N6 A B 64 51.958 34.307 117.407 1.00 76.06 N
ATOM 20 N1 A B 64 54.019 35.340 117.413 1.00 75.42 N
ATOM 21 C2 A B 64 55.077 35.783 118.095 1.00 74.71 C
ATOM 22 N3 A B 64 55.307 35.756 119.404 1.00 75.88 N
ATOM 23 C4 A B 64 54.274 35.196 120.059 1.00 76.14 C
ATOM 24 P G B 65 55.465 36.962 126.492 1.00 74.80 P
ATOM 25 OP1 G B 65 55.201 37.052 127.953 1.00 74.60 O
ATOM 26 OP2 G B 65 54.871 37.979 125.583 1.00 76.28 O
ATOM 27 O5' G B 65 57.048 36.962 126.314 1.00 71.57 O
TER
ATOM 2 P U A 111 46.122 34.142 116.901 1.00 64.53 P
ATOM 3 OP1 U A 111 45.388 33.207 116.000 1.00 62.58 O
ATOM 4 OP2 U A 111 46.618 33.672 118.221 1.00 63.44 O
ATOM 5 O5' U A 111 47.360 34.750 116.107 1.00 64.25 O
ATOM 6 C5' U A 111 47.193 35.314 114.793 1.00 61.30 C
ATOM 7 C4' U A 111 48.492 35.910 114.318 1.00 58.92 C
ATOM 8 O4' U A 111 48.833 37.057 115.133 1.00 59.00 O
ATOM 9 C3' U A 111 49.701 35.020 114.517 1.00 57.29 C
ATOM 10 O3' U A 111 49.766 34.017 113.515 1.00 55.42 O
ATOM 11 C2' U A 111 50.855 36.014 114.429 1.00 56.84 C
ATOM 12 O2' U A 111 51.210 36.304 113.097 1.00 55.97 O
ATOM 13 C1' U A 111 50.232 37.268 115.055 1.00 57.75 C
ATOM 14 N1 U A 111 50.742 37.636 116.385 1.00 58.57 N
ATOM 15 C2 U A 111 51.567 38.742 116.469 1.00 59.43 C
ATOM 16 O2 U A 111 51.854 39.428 115.508 1.00 60.84 O
ATOM 17 N3 U A 111 52.041 39.021 117.724 1.00 59.63 N
ATOM 18 C4 U A 111 51.778 38.328 118.882 1.00 59.41 C
ATOM 19 O4 U A 111 52.321 38.675 119.935 1.00 59.88 O
ATOM 20 C5 U A 111 50.901 37.212 118.718 1.00 59.12 C
ATOM 21 C6 U A 111 50.426 36.911 117.506 1.00 58.29 C
ATOM 22 P C A 112 50.182 32.524 113.921 1.00 54.48 P
ATOM 23 OP1 C A 112 50.094 31.682 112.704 1.00 54.36 O
ATOM 24 OP2 C A 112 49.411 32.151 115.132 1.00 55.26 O
ATOM 25 O5' C A 112 51.710 32.652 114.338 1.00 53.09 O
TER
ATOM 1 O3' C B 63 53.301 30.077 124.798 1.00 67.36 O
ATOM 2 P A B 64 52.407 31.402 124.629 1.00 69.84 P
ATOM 3 OP1 A B 64 51.908 31.786 125.979 1.00 69.86 O
ATOM 4 OP2 A B 64 51.434 31.178 123.522 1.00 69.34 O
ATOM 5 O5' A B 64 53.452 32.511 124.166 1.00 71.32 O
ATOM 6 C5' A B 64 54.758 32.607 124.775 1.00 74.28 C
ATOM 7 C4' A B 64 55.438 33.885 124.344 1.00 75.63 C
ATOM 8 O4' A B 64 55.588 33.886 122.905 1.00 77.04 O
ATOM 9 C3' A B 64 54.674 35.150 124.692 1.00 75.49 C
ATOM 10 O3' A B 64 55.018 35.471 126.057 1.00 75.06 O
ATOM 11 C2' A B 64 55.045 36.115 123.564 1.00 76.61 C
ATOM 12 O2' A B 64 56.279 36.771 123.770 1.00 80.39 O
ATOM 13 C1' A B 64 55.246 35.155 122.385 1.00 76.83 C
ATOM 14 N9 A B 64 54.175 34.948 121.409 1.00 76.24 N
ATOM 15 C8 A B 64 52.931 34.399 121.597 1.00 75.68 C
ATOM 16 N7 A B 64 52.263 34.215 120.483 1.00 75.63 N
ATOM 17 C5 A B 64 53.111 34.705 119.499 1.00 75.72 C
ATOM 18 C6 A B 64 53.000 34.775 118.095 1.00 75.63 C
ATOM 19 N6 A B 64 51.958 34.307 117.407 1.00 76.06 N
ATOM 20 N1 A B 64 54.019 35.340 117.413 1.00 75.42 N
ATOM 21 C2 A B 64 55.077 35.783 118.095 1.00 74.71 C
ATOM 22 N3 A B 64 55.307 35.756 119.404 1.00 75.88 N
ATOM 23 C4 A B 64 54.274 35.196 120.059 1.00 76.14 C
ATOM 24 P G B 65 55.465 36.962 126.492 1.00 74.80 P
ATOM 25 OP1 G B 65 55.201 37.052 127.953 1.00 74.60 O
ATOM 26 OP2 G B 65 54.871 37.979 125.583 1.00 76.28 O
ATOM 27 O5' G B 65 57.048 36.962 126.314 1.00 71.57 O
TER
Atoms:
C4: (51.778,38.328,118.882)
N3: (52.041,39.021,117.724)
OP1: (45.388,33.207,116.000)
OP2: (46.618,33.672,118.221)
C2: (51.567,38.742,116.469)
C1': (50.232,37.268,115.055)
C3': (49.701,35.020,114.517)
O5': (47.360,34.750,116.107)
O4': (48.833,37.057,115.133)
C5': (47.193,35.314,114.793)
P: (46.122,34.142,116.901)
C4': (48.492,35.910,114.318)
C2': (50.855,36.014,114.429)
O2': (51.210,36.304,113.097)
N1: (50.742,37.636,116.385)
O4: (52.321,38.675,119.935)
O2: (51.854,39.428,115.508)
C6: (50.426,36.911,117.506)
C5: (50.901,37.212,118.718)
O3': (49.766,34.017,113.515)
N3: (52.041,39.021,117.724)
OP1: (45.388,33.207,116.000)
OP2: (46.618,33.672,118.221)
C2: (51.567,38.742,116.469)
C1': (50.232,37.268,115.055)
C3': (49.701,35.020,114.517)
O5': (47.360,34.750,116.107)
O4': (48.833,37.057,115.133)
C5': (47.193,35.314,114.793)
P: (46.122,34.142,116.901)
C4': (48.492,35.910,114.318)
C2': (50.855,36.014,114.429)
O2': (51.210,36.304,113.097)
N1: (50.742,37.636,116.385)
O4: (52.321,38.675,119.935)
O2: (51.854,39.428,115.508)
C6: (50.426,36.911,117.506)
C5: (50.901,37.212,118.718)
O3': (49.766,34.017,113.515)
OP1: (51.908,31.786,125.979)
OP2: (51.434,31.178,123.522)
C3': (54.674,35.150,124.692)
C1': (55.246,35.155,122.385)
C5': (54.758,32.607,124.775)
O4': (55.588,33.886,122.905)
C8: (52.931,34.399,121.597)
O2': (56.279,36.771,123.770)
C6: (53.000,34.775,118.095)
C5: (53.111,34.705,119.499)
C4: (54.274,35.196,120.059)
P: (52.407,31.402,124.629)
C4': (55.438,33.885,124.344)
C2': (55.045,36.115,123.564)
C2: (55.077,35.783,118.095)
N1: (54.019,35.340,117.413)
N3: (55.307,35.756,119.404)
N6: (51.958,34.307,117.407)
N7: (52.263,34.215,120.483)
N9: (54.175,34.948,121.409)
O5': (53.452,32.511,124.166)
O3': (55.018,35.471,126.057)
OP2: (51.434,31.178,123.522)
C3': (54.674,35.150,124.692)
C1': (55.246,35.155,122.385)
C5': (54.758,32.607,124.775)
O4': (55.588,33.886,122.905)
C8: (52.931,34.399,121.597)
O2': (56.279,36.771,123.770)
C6: (53.000,34.775,118.095)
C5: (53.111,34.705,119.499)
C4: (54.274,35.196,120.059)
P: (52.407,31.402,124.629)
C4': (55.438,33.885,124.344)
C2': (55.045,36.115,123.564)
C2: (55.077,35.783,118.095)
N1: (54.019,35.340,117.413)
N3: (55.307,35.756,119.404)
N6: (51.958,34.307,117.407)
N7: (52.263,34.215,120.483)
N9: (54.175,34.948,121.409)
O5': (53.452,32.511,124.166)
O3': (55.018,35.471,126.057)
Image (generated by PyMOL):