Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1926:A1924
Extra
PDB:
ATOM 1 O3' G A1925 98.118 123.936 105.454 1.00 54.49 O
ATOM 2 P U A1926 97.460 122.545 105.005 1.00 54.48 P
ATOM 3 OP1 U A1926 96.159 122.852 104.382 1.00 54.25 O
ATOM 4 OP2 U A1926 97.501 121.694 106.213 1.00 54.62 O
ATOM 5 O5' U A1926 98.477 121.914 103.954 1.00 54.87 O
ATOM 6 C5' U A1926 98.008 121.098 102.875 1.00 55.26 C
ATOM 7 C4' U A1926 98.691 119.751 102.893 1.00 55.98 C
ATOM 8 O4' U A1926 100.041 119.847 102.390 1.00 55.48 O
ATOM 9 C3' U A1926 98.764 119.007 104.225 1.00 56.13 C
ATOM 10 O3' U A1926 98.569 117.621 103.962 1.00 57.20 O
ATOM 11 C2' U A1926 100.220 119.172 104.636 1.00 55.74 C
ATOM 12 O2' U A1926 100.661 118.022 105.320 1.00 59.46 O
ATOM 13 C1' U A1926 100.914 119.199 103.281 1.00 55.12 C
ATOM 14 N1 U A1926 102.220 119.872 103.230 1.00 53.88 N
ATOM 15 C2 U A1926 103.278 119.189 102.633 1.00 54.06 C
ATOM 16 O2 U A1926 103.197 118.054 102.220 1.00 53.62 O
ATOM 17 N3 U A1926 104.449 119.892 102.547 1.00 54.21 N
ATOM 18 C4 U A1926 104.692 121.164 103.006 1.00 53.90 C
ATOM 19 O4 U A1926 105.844 121.613 102.953 1.00 53.26 O
ATOM 20 C5 U A1926 103.565 121.791 103.635 1.00 53.74 C
ATOM 21 C6 U A1926 102.399 121.137 103.726 1.00 53.37 C
ATOM 22 P A A1927 97.341 116.827 104.638 1.00 58.51 P
ATOM 23 OP1 A A1927 97.646 115.388 104.412 1.00 58.36 O
ATOM 24 OP2 A A1927 96.026 117.380 104.228 1.00 58.12 O
ATOM 25 O5' A A1927 97.488 117.087 106.192 1.00 57.40 O
TER
ATOM 1 O3' U B1923 100.291 121.573 112.204 1.00 52.77 O
ATOM 2 P A B1924 99.897 123.031 111.614 1.00 52.19 P
ATOM 3 OP1 A B1924 100.195 124.077 112.638 1.00 52.69 O
ATOM 4 OP2 A B1924 98.506 122.846 111.158 1.00 52.89 O
ATOM 5 O5' A B1924 100.807 123.219 110.318 1.00 49.69 O
ATOM 6 C5' A B1924 101.928 124.122 110.308 1.00 50.54 C
ATOM 7 C4' A B1924 102.453 124.312 108.890 1.00 52.24 C
ATOM 8 O4' A B1924 103.252 123.167 108.484 1.00 51.54 O
ATOM 9 C3' A B1924 101.404 124.556 107.796 1.00 52.82 C
ATOM 10 O3' A B1924 101.860 125.537 106.834 1.00 52.85 O
ATOM 11 C2' A B1924 101.328 123.191 107.115 1.00 53.11 C
ATOM 12 O2' A B1924 101.011 123.292 105.742 1.00 53.93 O
ATOM 13 C1' A B1924 102.765 122.680 107.268 1.00 51.67 C
ATOM 14 N9 A B1924 102.941 121.226 107.229 1.00 50.53 N
ATOM 15 C8 A B1924 102.027 120.234 107.513 1.00 50.27 C
ATOM 16 N7 A B1924 102.465 119.023 107.266 1.00 50.60 N
ATOM 17 C5 A B1924 103.766 119.224 106.813 1.00 50.89 C
ATOM 18 C6 A B1924 104.770 118.335 106.364 1.00 49.83 C
ATOM 19 N6 A B1924 104.604 117.009 106.267 1.00 49.09 N
ATOM 20 N1 A B1924 105.959 118.866 106.006 1.00 49.33 N
ATOM 21 C2 A B1924 106.124 120.193 106.090 1.00 48.96 C
ATOM 22 N3 A B1924 105.263 121.130 106.478 1.00 49.69 N
ATOM 23 C4 A B1924 104.085 120.576 106.824 1.00 50.81 C
ATOM 24 P G B1925 101.186 127.005 106.770 1.00 51.78 P
ATOM 25 OP1 G B1925 102.217 127.881 106.171 1.00 52.87 O
ATOM 26 OP2 G B1925 100.557 127.388 108.058 1.00 51.36 O
ATOM 27 O5' G B1925 100.009 126.871 105.720 1.00 52.03 O
TER
ATOM 2 P U A1926 97.460 122.545 105.005 1.00 54.48 P
ATOM 3 OP1 U A1926 96.159 122.852 104.382 1.00 54.25 O
ATOM 4 OP2 U A1926 97.501 121.694 106.213 1.00 54.62 O
ATOM 5 O5' U A1926 98.477 121.914 103.954 1.00 54.87 O
ATOM 6 C5' U A1926 98.008 121.098 102.875 1.00 55.26 C
ATOM 7 C4' U A1926 98.691 119.751 102.893 1.00 55.98 C
ATOM 8 O4' U A1926 100.041 119.847 102.390 1.00 55.48 O
ATOM 9 C3' U A1926 98.764 119.007 104.225 1.00 56.13 C
ATOM 10 O3' U A1926 98.569 117.621 103.962 1.00 57.20 O
ATOM 11 C2' U A1926 100.220 119.172 104.636 1.00 55.74 C
ATOM 12 O2' U A1926 100.661 118.022 105.320 1.00 59.46 O
ATOM 13 C1' U A1926 100.914 119.199 103.281 1.00 55.12 C
ATOM 14 N1 U A1926 102.220 119.872 103.230 1.00 53.88 N
ATOM 15 C2 U A1926 103.278 119.189 102.633 1.00 54.06 C
ATOM 16 O2 U A1926 103.197 118.054 102.220 1.00 53.62 O
ATOM 17 N3 U A1926 104.449 119.892 102.547 1.00 54.21 N
ATOM 18 C4 U A1926 104.692 121.164 103.006 1.00 53.90 C
ATOM 19 O4 U A1926 105.844 121.613 102.953 1.00 53.26 O
ATOM 20 C5 U A1926 103.565 121.791 103.635 1.00 53.74 C
ATOM 21 C6 U A1926 102.399 121.137 103.726 1.00 53.37 C
ATOM 22 P A A1927 97.341 116.827 104.638 1.00 58.51 P
ATOM 23 OP1 A A1927 97.646 115.388 104.412 1.00 58.36 O
ATOM 24 OP2 A A1927 96.026 117.380 104.228 1.00 58.12 O
ATOM 25 O5' A A1927 97.488 117.087 106.192 1.00 57.40 O
TER
ATOM 1 O3' U B1923 100.291 121.573 112.204 1.00 52.77 O
ATOM 2 P A B1924 99.897 123.031 111.614 1.00 52.19 P
ATOM 3 OP1 A B1924 100.195 124.077 112.638 1.00 52.69 O
ATOM 4 OP2 A B1924 98.506 122.846 111.158 1.00 52.89 O
ATOM 5 O5' A B1924 100.807 123.219 110.318 1.00 49.69 O
ATOM 6 C5' A B1924 101.928 124.122 110.308 1.00 50.54 C
ATOM 7 C4' A B1924 102.453 124.312 108.890 1.00 52.24 C
ATOM 8 O4' A B1924 103.252 123.167 108.484 1.00 51.54 O
ATOM 9 C3' A B1924 101.404 124.556 107.796 1.00 52.82 C
ATOM 10 O3' A B1924 101.860 125.537 106.834 1.00 52.85 O
ATOM 11 C2' A B1924 101.328 123.191 107.115 1.00 53.11 C
ATOM 12 O2' A B1924 101.011 123.292 105.742 1.00 53.93 O
ATOM 13 C1' A B1924 102.765 122.680 107.268 1.00 51.67 C
ATOM 14 N9 A B1924 102.941 121.226 107.229 1.00 50.53 N
ATOM 15 C8 A B1924 102.027 120.234 107.513 1.00 50.27 C
ATOM 16 N7 A B1924 102.465 119.023 107.266 1.00 50.60 N
ATOM 17 C5 A B1924 103.766 119.224 106.813 1.00 50.89 C
ATOM 18 C6 A B1924 104.770 118.335 106.364 1.00 49.83 C
ATOM 19 N6 A B1924 104.604 117.009 106.267 1.00 49.09 N
ATOM 20 N1 A B1924 105.959 118.866 106.006 1.00 49.33 N
ATOM 21 C2 A B1924 106.124 120.193 106.090 1.00 48.96 C
ATOM 22 N3 A B1924 105.263 121.130 106.478 1.00 49.69 N
ATOM 23 C4 A B1924 104.085 120.576 106.824 1.00 50.81 C
ATOM 24 P G B1925 101.186 127.005 106.770 1.00 51.78 P
ATOM 25 OP1 G B1925 102.217 127.881 106.171 1.00 52.87 O
ATOM 26 OP2 G B1925 100.557 127.388 108.058 1.00 51.36 O
ATOM 27 O5' G B1925 100.009 126.871 105.720 1.00 52.03 O
TER
Atoms:
C4: (104.692,121.164,103.006)
N3: (104.449,119.892,102.547)
OP1: (96.159,122.852,104.382)
OP2: (97.501,121.694,106.213)
C2: (103.278,119.189,102.633)
C1': (100.914,119.199,103.281)
C3': (98.764,119.007,104.225)
O5': (98.477,121.914,103.954)
O4': (100.041,119.847,102.390)
C5': (98.008,121.098,102.875)
P: (97.460,122.545,105.005)
C4': (98.691,119.751,102.893)
C2': (100.220,119.172,104.636)
O2': (100.661,118.022,105.320)
N1: (102.220,119.872,103.230)
O4: (105.844,121.613,102.953)
O2: (103.197,118.054,102.220)
C6: (102.399,121.137,103.726)
C5: (103.565,121.791,103.635)
O3': (98.569,117.621,103.962)
N3: (104.449,119.892,102.547)
OP1: (96.159,122.852,104.382)
OP2: (97.501,121.694,106.213)
C2: (103.278,119.189,102.633)
C1': (100.914,119.199,103.281)
C3': (98.764,119.007,104.225)
O5': (98.477,121.914,103.954)
O4': (100.041,119.847,102.390)
C5': (98.008,121.098,102.875)
P: (97.460,122.545,105.005)
C4': (98.691,119.751,102.893)
C2': (100.220,119.172,104.636)
O2': (100.661,118.022,105.320)
N1: (102.220,119.872,103.230)
O4: (105.844,121.613,102.953)
O2: (103.197,118.054,102.220)
C6: (102.399,121.137,103.726)
C5: (103.565,121.791,103.635)
O3': (98.569,117.621,103.962)
OP1: (100.195,124.077,112.638)
OP2: (98.506,122.846,111.158)
C3': (101.404,124.556,107.796)
C1': (102.765,122.680,107.268)
C5': (101.928,124.122,110.308)
O4': (103.252,123.167,108.484)
C8: (102.027,120.234,107.513)
O2': (101.011,123.292,105.742)
C6: (104.770,118.335,106.364)
C5: (103.766,119.224,106.813)
C4: (104.085,120.576,106.824)
P: (99.897,123.031,111.614)
C4': (102.453,124.312,108.890)
C2': (101.328,123.191,107.115)
C2: (106.124,120.193,106.090)
N1: (105.959,118.866,106.006)
N3: (105.263,121.130,106.478)
N6: (104.604,117.009,106.267)
N7: (102.465,119.023,107.266)
N9: (102.941,121.226,107.229)
O5': (100.807,123.219,110.318)
O3': (101.860,125.537,106.834)
OP2: (98.506,122.846,111.158)
C3': (101.404,124.556,107.796)
C1': (102.765,122.680,107.268)
C5': (101.928,124.122,110.308)
O4': (103.252,123.167,108.484)
C8: (102.027,120.234,107.513)
O2': (101.011,123.292,105.742)
C6: (104.770,118.335,106.364)
C5: (103.766,119.224,106.813)
C4: (104.085,120.576,106.824)
P: (99.897,123.031,111.614)
C4': (102.453,124.312,108.890)
C2': (101.328,123.191,107.115)
C2: (106.124,120.193,106.090)
N1: (105.959,118.866,106.006)
N3: (105.263,121.130,106.478)
N6: (104.604,117.009,106.267)
N7: (102.465,119.023,107.266)
N9: (102.941,121.226,107.229)
O5': (100.807,123.219,110.318)
O3': (101.860,125.537,106.834)
Image (generated by PyMOL):