ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A106:A278

Extra

PDB:
ATOM 1 O3' G A 105 -5.490 63.984 110.837 1.00 57.54 O
ATOM 2 P U A 106 -5.520 65.247 109.863 1.00 46.60 P
ATOM 3 OP1 U A 106 -4.894 66.357 110.626 1.00 65.81 O
ATOM 4 OP2 U A 106 -6.887 65.363 109.293 1.00 46.30 O
ATOM 5 O5' U A 106 -4.502 64.851 108.683 1.00 47.43 O
ATOM 6 C5' U A 106 -3.105 64.984 108.934 1.00 56.56 C
ATOM 7 C4' U A 106 -2.289 64.281 107.869 1.00 55.15 C
ATOM 8 O4' U A 106 -2.770 62.931 107.699 1.00 53.94 O
ATOM 9 C3' U A 106 -2.405 64.882 106.484 1.00 54.92 C
ATOM 10 O3' U A 106 -1.504 65.971 106.385 1.00 58.30 O
ATOM 11 C2' U A 106 -1.933 63.719 105.629 1.00 53.25 C
ATOM 12 O2' U A 106 -0.521 63.610 105.633 1.00 59.94 O
ATOM 13 C1' U A 106 -2.558 62.540 106.362 1.00 54.96 C
ATOM 14 N1 U A 106 -3.865 62.149 105.823 1.00 51.03 N
ATOM 15 C2 U A 106 -3.919 61.525 104.604 1.00 59.81 C
ATOM 16 O2 U A 106 -2.917 61.291 103.955 1.00 74.15 O
ATOM 17 N3 U A 106 -5.179 61.192 104.173 1.00 48.38 N
ATOM 18 C4 U A 106 -6.359 61.416 104.841 1.00 50.20 C
ATOM 19 O4 U A 106 -7.416 61.064 104.346 1.00 60.84 O
ATOM 20 C5 U A 106 -6.215 62.068 106.111 1.00 58.04 C
ATOM 21 C6 U A 106 -4.999 62.405 106.550 1.00 53.19 C
ATOM 22 P A A 107 -1.847 67.184 105.402 1.00 59.63 P
ATOM 23 OP1 A A 107 -0.613 68.003 105.314 1.00 62.75 O
ATOM 24 OP2 A A 107 -3.128 67.773 105.853 1.00 69.97 O
ATOM 25 O5' A A 107 -2.124 66.496 103.979 1.00 68.80 O
TER

ATOM 1 O3' U B 277 -14.382 66.528 104.252 1.00 53.41 O
ATOM 2 P A B 278 -14.100 65.139 104.986 1.00 54.99 P
ATOM 3 OP1 A B 278 -15.391 64.412 104.974 1.00 53.03 O
ATOM 4 OP2 A B 278 -13.407 65.357 106.277 1.00 62.35 O
ATOM 5 O5' A B 278 -13.027 64.494 103.983 1.00 66.17 O
ATOM 6 C5' A B 278 -13.444 63.948 102.738 1.00 65.52 C
ATOM 7 C4' A B 278 -12.264 63.414 101.949 1.00 57.54 C
ATOM 8 O4' A B 278 -11.323 64.492 101.730 1.00 47.71 O
ATOM 9 C3' A B 278 -11.410 62.350 102.628 1.00 60.83 C
ATOM 10 O3' A B 278 -11.998 61.052 102.596 1.00 49.07 O
ATOM 11 C2' A B 278 -10.157 62.429 101.755 1.00 69.27 C
ATOM 12 O2' A B 278 -10.272 61.761 100.505 1.00 81.43 O
ATOM 13 C1' A B 278 -10.027 63.941 101.578 1.00 53.66 C
ATOM 14 N9 A B 278 -9.160 64.502 102.601 1.00 56.58 N
ATOM 15 C8 A B 278 -9.543 65.187 103.714 1.00 64.33 C
ATOM 16 N7 A B 278 -8.538 65.562 104.472 1.00 68.75 N
ATOM 17 C5 A B 278 -7.422 65.082 103.813 1.00 68.41 C
ATOM 18 C6 A B 278 -6.046 65.151 104.110 1.00 67.97 C
ATOM 19 N6 A B 278 -5.557 65.762 105.196 1.00 66.96 N
ATOM 20 N1 A B 278 -5.197 64.562 103.237 1.00 67.27 N
ATOM 21 C2 A B 278 -5.697 63.950 102.151 1.00 66.23 C
ATOM 22 N3 A B 278 -6.968 63.823 101.770 1.00 64.65 N
ATOM 23 C4 A B 278 -7.787 64.419 102.655 1.00 64.39 C
ATOM 24 P G B 279 -11.829 60.075 103.861 1.00 65.36 P
ATOM 25 OP1 G B 279 -13.028 59.207 103.790 1.00 75.34 O
ATOM 26 OP2 G B 279 -11.503 60.844 105.104 1.00 44.20 O
ATOM 27 O5' G B 279 -10.529 59.199 103.496 1.00 61.96 O
TER

Atoms:
C4: (-6.359,61.416,104.841)
N3: (-5.179,61.192,104.173)
OP1: (-4.894,66.357,110.626)
OP2: (-6.887,65.363,109.293)
C2: (-3.919,61.525,104.604)
C1': (-2.558,62.540,106.362)
C3': (-2.405,64.882,106.484)
O5': (-4.502,64.851,108.683)
O4': (-2.770,62.931,107.699)
C5': (-3.105,64.984,108.934)
P: (-5.520,65.247,109.863)
C4': (-2.289,64.281,107.869)
C2': (-1.933,63.719,105.629)
O2': (-0.521,63.610,105.633)
N1: (-3.865,62.149,105.823)
O4: (-7.416,61.064,104.346)
O2: (-2.917,61.291,103.955)
C6: (-4.999,62.405,106.550)
C5: (-6.215,62.068,106.111)
O3': (-1.504,65.971,106.385)
OP1: (-15.391,64.412,104.974)
OP2: (-13.407,65.357,106.277)
C3': (-11.410,62.350,102.628)
C1': (-10.027,63.941,101.578)
C5': (-13.444,63.948,102.738)
O4': (-11.323,64.492,101.730)
C8: (-9.543,65.187,103.714)
O2': (-10.272,61.761,100.505)
C6: (-6.046,65.151,104.110)
C5: (-7.422,65.082,103.813)
C4: (-7.787,64.419,102.655)
P: (-14.100,65.139,104.986)
C4': (-12.264,63.414,101.949)
C2': (-10.157,62.429,101.755)
C2: (-5.697,63.950,102.151)
N1: (-5.197,64.562,103.237)
N3: (-6.968,63.823,101.770)
N6: (-5.557,65.762,105.196)
N7: (-8.538,65.562,104.472)
N9: (-9.160,64.502,102.601)
O5': (-13.027,64.494,103.983)
O3': (-11.998,61.052,102.596)
Image (generated by PyMOL):
PyMOL image
show in jmol