Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A2424:A2446
Extra
PDB:
ATOM 1 O3' A A2423 55.079 -87.851 143.007 1.00 87.67 O
ATOM 2 P U A2424 55.359 -86.285 142.780 1.00 94.97 P
ATOM 3 OP1 U A2424 54.717 -85.507 143.867 1.00 82.50 O
ATOM 4 OP2 U A2424 55.015 -85.993 141.368 1.00 85.87 O
ATOM 5 O5' U A2424 56.932 -86.112 142.921 1.00 85.87 O
ATOM 6 C5' U A2424 57.600 -86.387 144.152 1.00 85.47 C
ATOM 7 C4' U A2424 58.446 -85.210 144.557 1.00 80.64 C
ATOM 8 O4' U A2424 59.269 -84.832 143.423 1.00 81.75 O
ATOM 9 C3' U A2424 57.648 -83.975 144.947 1.00 83.87 C
ATOM 10 O3' U A2424 58.339 -83.297 145.990 1.00 83.94 O
ATOM 11 C2' U A2424 57.627 -83.157 143.659 1.00 84.20 C
ATOM 12 O2' U A2424 57.489 -81.767 143.875 1.00 86.31 O
ATOM 13 C1' U A2424 58.978 -83.513 143.035 1.00 83.43 C
ATOM 14 N1 U A2424 59.012 -83.473 141.563 1.00 84.49 N
ATOM 15 C2 U A2424 60.143 -82.943 140.948 1.00 86.45 C
ATOM 16 O2 U A2424 61.120 -82.536 141.567 1.00 88.25 O
ATOM 17 N3 U A2424 60.091 -82.914 139.574 1.00 83.28 N
ATOM 18 C4 U A2424 59.051 -83.349 138.765 1.00 79.25 C
ATOM 19 O4 U A2424 59.118 -83.192 137.540 1.00 79.14 O
ATOM 20 C5 U A2424 57.941 -83.902 139.471 1.00 83.53 C
ATOM 21 C6 U A2424 57.956 -83.943 140.809 1.00 84.44 C
ATOM 22 P C A2425 58.243 -83.852 147.497 1.00 82.36 P
ATOM 23 OP1 C A2425 57.769 -85.262 147.487 1.00 78.96 O
ATOM 24 OP2 C A2425 57.514 -82.832 148.293 1.00 81.83 O
ATOM 25 O5' C A2425 59.758 -83.878 147.979 1.00 81.51 O
TER
ATOM 1 O3' C B2445 53.062 -81.789 132.858 1.00 81.77 O
ATOM 2 P A B2446 54.132 -82.988 132.918 1.00 86.67 P
ATOM 3 OP1 A B2446 54.214 -83.555 131.542 1.00 78.95 O
ATOM 4 OP2 A B2446 53.732 -83.863 134.058 1.00 83.73 O
ATOM 5 O5' A B2446 55.518 -82.283 133.306 1.00 85.43 O
ATOM 6 C5' A B2446 56.278 -81.538 132.342 1.00 81.87 C
ATOM 7 C4' A B2446 57.460 -80.834 133.000 1.00 81.16 C
ATOM 8 O4' A B2446 56.992 -79.943 134.050 1.00 77.69 O
ATOM 9 C3' A B2446 58.490 -81.718 133.691 1.00 81.75 C
ATOM 10 O3' A B2446 59.418 -82.278 132.775 1.00 83.17 O
ATOM 11 C2' A B2446 59.128 -80.764 134.696 1.00 77.45 C
ATOM 12 O2' A B2446 60.114 -79.921 134.135 1.00 81.32 O
ATOM 13 C1' A B2446 57.919 -79.930 135.122 1.00 77.78 C
ATOM 14 N9 A B2446 57.263 -80.527 136.286 1.00 78.71 N
ATOM 15 C8 A B2446 56.309 -81.524 136.292 1.00 81.25 C
ATOM 16 N7 A B2446 55.912 -81.868 137.492 1.00 79.86 N
ATOM 17 C5 A B2446 56.644 -81.044 138.334 1.00 80.02 C
ATOM 18 C6 A B2446 56.675 -80.913 139.731 1.00 84.46 C
ATOM 19 N6 A B2446 55.908 -81.633 140.557 1.00 84.83 N
ATOM 20 N1 A B2446 57.524 -80.003 140.260 1.00 81.99 N
ATOM 21 C2 A B2446 58.283 -79.274 139.429 1.00 81.30 C
ATOM 22 N3 A B2446 58.339 -79.299 138.099 1.00 81.59 N
ATOM 23 C4 A B2446 57.485 -80.215 137.606 1.00 79.54 C
ATOM 24 P A B2447 59.365 -83.856 132.464 1.00 82.43 P
ATOM 25 OP1 A B2447 59.834 -84.059 131.065 1.00 82.81 O
ATOM 26 OP2 A B2447 58.023 -84.364 132.858 1.00 80.19 O
ATOM 27 O5' A B2447 60.435 -84.460 133.472 1.00 77.55 O
TER
ATOM 2 P U A2424 55.359 -86.285 142.780 1.00 94.97 P
ATOM 3 OP1 U A2424 54.717 -85.507 143.867 1.00 82.50 O
ATOM 4 OP2 U A2424 55.015 -85.993 141.368 1.00 85.87 O
ATOM 5 O5' U A2424 56.932 -86.112 142.921 1.00 85.87 O
ATOM 6 C5' U A2424 57.600 -86.387 144.152 1.00 85.47 C
ATOM 7 C4' U A2424 58.446 -85.210 144.557 1.00 80.64 C
ATOM 8 O4' U A2424 59.269 -84.832 143.423 1.00 81.75 O
ATOM 9 C3' U A2424 57.648 -83.975 144.947 1.00 83.87 C
ATOM 10 O3' U A2424 58.339 -83.297 145.990 1.00 83.94 O
ATOM 11 C2' U A2424 57.627 -83.157 143.659 1.00 84.20 C
ATOM 12 O2' U A2424 57.489 -81.767 143.875 1.00 86.31 O
ATOM 13 C1' U A2424 58.978 -83.513 143.035 1.00 83.43 C
ATOM 14 N1 U A2424 59.012 -83.473 141.563 1.00 84.49 N
ATOM 15 C2 U A2424 60.143 -82.943 140.948 1.00 86.45 C
ATOM 16 O2 U A2424 61.120 -82.536 141.567 1.00 88.25 O
ATOM 17 N3 U A2424 60.091 -82.914 139.574 1.00 83.28 N
ATOM 18 C4 U A2424 59.051 -83.349 138.765 1.00 79.25 C
ATOM 19 O4 U A2424 59.118 -83.192 137.540 1.00 79.14 O
ATOM 20 C5 U A2424 57.941 -83.902 139.471 1.00 83.53 C
ATOM 21 C6 U A2424 57.956 -83.943 140.809 1.00 84.44 C
ATOM 22 P C A2425 58.243 -83.852 147.497 1.00 82.36 P
ATOM 23 OP1 C A2425 57.769 -85.262 147.487 1.00 78.96 O
ATOM 24 OP2 C A2425 57.514 -82.832 148.293 1.00 81.83 O
ATOM 25 O5' C A2425 59.758 -83.878 147.979 1.00 81.51 O
TER
ATOM 1 O3' C B2445 53.062 -81.789 132.858 1.00 81.77 O
ATOM 2 P A B2446 54.132 -82.988 132.918 1.00 86.67 P
ATOM 3 OP1 A B2446 54.214 -83.555 131.542 1.00 78.95 O
ATOM 4 OP2 A B2446 53.732 -83.863 134.058 1.00 83.73 O
ATOM 5 O5' A B2446 55.518 -82.283 133.306 1.00 85.43 O
ATOM 6 C5' A B2446 56.278 -81.538 132.342 1.00 81.87 C
ATOM 7 C4' A B2446 57.460 -80.834 133.000 1.00 81.16 C
ATOM 8 O4' A B2446 56.992 -79.943 134.050 1.00 77.69 O
ATOM 9 C3' A B2446 58.490 -81.718 133.691 1.00 81.75 C
ATOM 10 O3' A B2446 59.418 -82.278 132.775 1.00 83.17 O
ATOM 11 C2' A B2446 59.128 -80.764 134.696 1.00 77.45 C
ATOM 12 O2' A B2446 60.114 -79.921 134.135 1.00 81.32 O
ATOM 13 C1' A B2446 57.919 -79.930 135.122 1.00 77.78 C
ATOM 14 N9 A B2446 57.263 -80.527 136.286 1.00 78.71 N
ATOM 15 C8 A B2446 56.309 -81.524 136.292 1.00 81.25 C
ATOM 16 N7 A B2446 55.912 -81.868 137.492 1.00 79.86 N
ATOM 17 C5 A B2446 56.644 -81.044 138.334 1.00 80.02 C
ATOM 18 C6 A B2446 56.675 -80.913 139.731 1.00 84.46 C
ATOM 19 N6 A B2446 55.908 -81.633 140.557 1.00 84.83 N
ATOM 20 N1 A B2446 57.524 -80.003 140.260 1.00 81.99 N
ATOM 21 C2 A B2446 58.283 -79.274 139.429 1.00 81.30 C
ATOM 22 N3 A B2446 58.339 -79.299 138.099 1.00 81.59 N
ATOM 23 C4 A B2446 57.485 -80.215 137.606 1.00 79.54 C
ATOM 24 P A B2447 59.365 -83.856 132.464 1.00 82.43 P
ATOM 25 OP1 A B2447 59.834 -84.059 131.065 1.00 82.81 O
ATOM 26 OP2 A B2447 58.023 -84.364 132.858 1.00 80.19 O
ATOM 27 O5' A B2447 60.435 -84.460 133.472 1.00 77.55 O
TER
Atoms:
C4: (59.051,-83.349,138.765)
N3: (60.091,-82.914,139.574)
OP1: (54.717,-85.507,143.867)
OP2: (55.015,-85.993,141.368)
C2: (60.143,-82.943,140.948)
C1': (58.978,-83.513,143.035)
C3': (57.648,-83.975,144.947)
O5': (56.932,-86.112,142.921)
O4': (59.269,-84.832,143.423)
C5': (57.600,-86.387,144.152)
P: (55.359,-86.285,142.780)
C4': (58.446,-85.210,144.557)
C2': (57.627,-83.157,143.659)
O2': (57.489,-81.767,143.875)
N1: (59.012,-83.473,141.563)
O4: (59.118,-83.192,137.540)
O2: (61.120,-82.536,141.567)
C6: (57.956,-83.943,140.809)
C5: (57.941,-83.902,139.471)
O3': (58.339,-83.297,145.990)
N3: (60.091,-82.914,139.574)
OP1: (54.717,-85.507,143.867)
OP2: (55.015,-85.993,141.368)
C2: (60.143,-82.943,140.948)
C1': (58.978,-83.513,143.035)
C3': (57.648,-83.975,144.947)
O5': (56.932,-86.112,142.921)
O4': (59.269,-84.832,143.423)
C5': (57.600,-86.387,144.152)
P: (55.359,-86.285,142.780)
C4': (58.446,-85.210,144.557)
C2': (57.627,-83.157,143.659)
O2': (57.489,-81.767,143.875)
N1: (59.012,-83.473,141.563)
O4: (59.118,-83.192,137.540)
O2: (61.120,-82.536,141.567)
C6: (57.956,-83.943,140.809)
C5: (57.941,-83.902,139.471)
O3': (58.339,-83.297,145.990)
OP1: (54.214,-83.555,131.542)
OP2: (53.732,-83.863,134.058)
C3': (58.490,-81.718,133.691)
C1': (57.919,-79.930,135.122)
C5': (56.278,-81.538,132.342)
O4': (56.992,-79.943,134.050)
C8: (56.309,-81.524,136.292)
O2': (60.114,-79.921,134.135)
C6: (56.675,-80.913,139.731)
C5: (56.644,-81.044,138.334)
C4: (57.485,-80.215,137.606)
P: (54.132,-82.988,132.918)
C4': (57.460,-80.834,133.000)
C2': (59.128,-80.764,134.696)
C2: (58.283,-79.274,139.429)
N1: (57.524,-80.003,140.260)
N3: (58.339,-79.299,138.099)
N6: (55.908,-81.633,140.557)
N7: (55.912,-81.868,137.492)
N9: (57.263,-80.527,136.286)
O5': (55.518,-82.283,133.306)
O3': (59.418,-82.278,132.775)
OP2: (53.732,-83.863,134.058)
C3': (58.490,-81.718,133.691)
C1': (57.919,-79.930,135.122)
C5': (56.278,-81.538,132.342)
O4': (56.992,-79.943,134.050)
C8: (56.309,-81.524,136.292)
O2': (60.114,-79.921,134.135)
C6: (56.675,-80.913,139.731)
C5: (56.644,-81.044,138.334)
C4: (57.485,-80.215,137.606)
P: (54.132,-82.988,132.918)
C4': (57.460,-80.834,133.000)
C2': (59.128,-80.764,134.696)
C2: (58.283,-79.274,139.429)
N1: (57.524,-80.003,140.260)
N3: (58.339,-79.299,138.099)
N6: (55.908,-81.633,140.557)
N7: (55.912,-81.868,137.492)
N9: (57.263,-80.527,136.286)
O5': (55.518,-82.283,133.306)
O3': (59.418,-82.278,132.775)
Image (generated by PyMOL):