ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZZM:B7:B12

Extra

PDB:
ATOM 1 O3' G A 6 12.925 -36.075 -11.308 1.00 50.70 O
ATOM 2 P U A 7 13.433 -34.979 -12.362 1.00 66.73 P
ATOM 3 OP1 U A 7 14.719 -34.448 -11.846 1.00 68.94 O
ATOM 4 OP2 U A 7 12.332 -34.035 -12.703 1.00 67.59 O
ATOM 5 O5' U A 7 13.797 -35.835 -13.653 1.00 72.72 O
ATOM 6 C5' U A 7 14.618 -36.986 -13.533 1.00 61.37 C
ATOM 7 C4' U A 7 15.399 -37.201 -14.793 1.00 54.63 C
ATOM 8 O4' U A 7 14.491 -37.468 -15.895 1.00 46.34 O
ATOM 9 C3' U A 7 16.228 -36.027 -15.272 1.00 45.79 C
ATOM 10 O3' U A 7 17.472 -35.970 -14.564 1.00 68.62 O
ATOM 11 C2' U A 7 16.431 -36.413 -16.724 1.00 48.73 C
ATOM 12 O2' U A 7 17.391 -37.456 -16.825 1.00 54.56 O
ATOM 13 C1' U A 7 15.037 -36.940 -17.085 1.00 35.19 C
ATOM 14 N1 U A 7 14.124 -35.895 -17.562 1.00 36.10 N
ATOM 15 C2 U A 7 14.199 -35.546 -18.889 1.00 37.06 C
ATOM 16 O2 U A 7 15.008 -36.043 -19.643 1.00 55.86 O
ATOM 17 N3 U A 7 13.296 -34.591 -19.300 1.00 38.39 N
ATOM 18 C4 U A 7 12.344 -33.955 -18.520 1.00 44.64 C
ATOM 19 O4 U A 7 11.574 -33.136 -19.042 1.00 48.11 O
ATOM 20 C5 U A 7 12.345 -34.356 -17.136 1.00 28.33 C
ATOM 21 C6 U A 7 13.214 -35.288 -16.715 1.00 29.24 C
ATOM 22 P C A 8 18.273 -34.574 -14.443 1.00 63.28 P
ATOM 23 OP1 C A 8 18.558 -34.354 -13.003 1.00 59.63 O
ATOM 24 OP2 C A 8 17.569 -33.528 -15.226 1.00 61.61 O
ATOM 25 O5' C A 8 19.659 -34.862 -15.165 1.00 62.13 O
TER

ATOM 1 O3' C B 11 10.159 -26.576 -14.958 1.00 38.72 O
ATOM 2 P A B 12 9.237 -27.849 -15.135 1.00 56.93 P
ATOM 3 OP1 A B 12 7.844 -27.363 -14.963 1.00 73.01 O
ATOM 4 OP2 A B 12 9.784 -28.912 -14.237 1.00 48.53 O
ATOM 5 O5' A B 12 9.439 -28.239 -16.660 1.00 45.78 O
ATOM 6 C5' A B 12 9.152 -27.290 -17.675 1.00 50.69 C
ATOM 7 C4' A B 12 9.756 -27.728 -18.979 1.00 57.16 C
ATOM 8 O4' A B 12 11.199 -27.728 -18.873 1.00 66.18 O
ATOM 9 C3' A B 12 9.408 -29.139 -19.423 1.00 62.81 C
ATOM 10 O3' A B 12 8.149 -29.085 -20.085 1.00 59.90 O
ATOM 11 C2' A B 12 10.565 -29.457 -20.364 1.00 57.73 C
ATOM 12 O2' A B 12 10.420 -28.812 -21.620 1.00 46.92 O
ATOM 13 C1' A B 12 11.732 -28.808 -19.618 1.00 55.46 C
ATOM 14 N9 A B 12 12.437 -29.679 -18.680 1.00 52.49 N
ATOM 15 C8 A B 12 12.252 -29.778 -17.324 1.00 41.90 C
ATOM 16 N7 A B 12 13.072 -30.617 -16.740 1.00 46.81 N
ATOM 17 C5 A B 12 13.849 -31.105 -17.783 1.00 42.70 C
ATOM 18 C6 A B 12 14.908 -32.033 -17.829 1.00 46.41 C
ATOM 19 N6 A B 12 15.446 -32.613 -16.750 1.00 45.22 N
ATOM 20 N1 A B 12 15.414 -32.342 -19.038 1.00 37.03 N
ATOM 21 C2 A B 12 14.918 -31.725 -20.114 1.00 44.73 C
ATOM 22 N3 A B 12 13.958 -30.813 -20.198 1.00 40.59 N
ATOM 23 C4 A B 12 13.453 -30.550 -18.985 1.00 43.04 C
ATOM 24 P A B 13 7.472 -30.424 -20.640 1.00 57.27 P
ATOM 25 OP1 A B 13 6.096 -30.003 -20.980 1.00 54.81 O
ATOM 26 OP2 A B 13 7.703 -31.582 -19.705 1.00 44.64 O
ATOM 27 O5' A B 13 8.242 -30.665 -22.007 1.00 43.06 O
TER

Atoms:
C4: (12.344,-33.955,-18.520)
N3: (13.296,-34.591,-19.300)
OP1: (14.719,-34.448,-11.846)
OP2: (12.332,-34.035,-12.703)
C2: (14.199,-35.546,-18.889)
C1': (15.037,-36.940,-17.085)
C3': (16.228,-36.027,-15.272)
O5': (13.797,-35.835,-13.653)
O4': (14.491,-37.468,-15.895)
C5': (14.618,-36.986,-13.533)
P: (13.433,-34.979,-12.362)
C4': (15.399,-37.201,-14.793)
C2': (16.431,-36.413,-16.724)
O2': (17.391,-37.456,-16.825)
N1: (14.124,-35.895,-17.562)
O4: (11.574,-33.136,-19.042)
O2: (15.008,-36.043,-19.643)
C6: (13.214,-35.288,-16.715)
C5: (12.345,-34.356,-17.136)
O3': (17.472,-35.970,-14.564)
OP1: (7.844,-27.363,-14.963)
OP2: (9.784,-28.912,-14.237)
C3': (9.408,-29.139,-19.423)
C1': (11.732,-28.808,-19.618)
C5': (9.152,-27.290,-17.675)
O4': (11.199,-27.728,-18.873)
C8: (12.252,-29.778,-17.324)
O2': (10.420,-28.812,-21.620)
C6: (14.908,-32.033,-17.829)
C5: (13.849,-31.105,-17.783)
C4: (13.453,-30.550,-18.985)
P: (9.237,-27.849,-15.135)
C4': (9.756,-27.728,-18.979)
C2': (10.565,-29.457,-20.364)
C2: (14.918,-31.725,-20.114)
N1: (15.414,-32.342,-19.038)
N3: (13.958,-30.813,-20.198)
N6: (15.446,-32.613,-16.750)
N7: (13.072,-30.617,-16.740)
N9: (12.437,-29.679,-18.680)
O5': (9.439,-28.239,-16.660)
O3': (8.149,-29.085,-20.085)
Image (generated by PyMOL):
PyMOL image
show in jmol