Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW7:A6:A7
Extra
PDB:
ATOM 1 O3' C A 5 -2.940 -5.348 6.342 1.00 7.89 O
ATOM 2 P U A 6 -4.056 -4.262 5.981 1.00 8.90 P
ATOM 3 OP1 U A 6 -3.633 -3.007 6.642 1.00 11.51 O
ATOM 4 OP2 U A 6 -5.388 -4.833 6.273 1.00 9.53 O
ATOM 5 O5' U A 6 -3.960 -4.104 4.393 1.00 7.97 O
ATOM 6 C5' U A 6 -2.827 -3.505 3.786 1.00 8.49 C
ATOM 7 C4' U A 6 -2.927 -3.661 2.282 1.00 8.43 C
ATOM 8 O4' U A 6 -2.873 -5.071 1.951 1.00 8.06 O
ATOM 9 C3' U A 6 -4.239 -3.193 1.664 1.00 7.87 C
ATOM 10 O3' U A 6 -4.215 -1.808 1.376 1.00 8.73 O
ATOM 11 C2' U A 6 -4.238 -3.977 0.360 1.00 7.82 C
ATOM 12 O2' U A 6 -3.400 -3.383 -0.608 1.00 8.31 O
ATOM 13 C1' U A 6 -3.661 -5.316 0.803 1.00 8.32 C
ATOM 14 N1 U A 6 -4.738 -6.288 1.120 1.00 7.39 N
ATOM 15 C2 U A 6 -5.142 -7.142 0.120 1.00 8.03 C
ATOM 16 O2 U A 6 -4.644 -7.137 -0.991 1.00 9.25 O
ATOM 17 N3 U A 6 -6.148 -8.007 0.466 1.00 8.34 N
ATOM 18 C4 U A 6 -6.785 -8.088 1.689 1.00 8.13 C
ATOM 19 O4 U A 6 -7.677 -8.915 1.852 1.00 9.17 O
ATOM 20 C5 U A 6 -6.316 -7.157 2.683 1.00 7.75 C
ATOM 21 C6 U A 6 -5.330 -6.306 2.368 1.00 7.64 C
ATOM 22 P A A 7 -5.567 -0.922 1.402 0.50 9.30 P
ATOM 23 OP1 A A 7 -6.445 -1.436 0.331 0.50 9.62 O
ATOM 24 OP2 A A 7 -5.155 0.497 1.396 0.50 10.97 O
ATOM 25 O5' A A 7 -6.269 -1.221 2.802 0.50 9.65 O
TER
ATOM 1 O3' U B 6 -4.215 -1.808 1.376 1.00 8.73 O
ATOM 2 O4' A B 7 -9.114 -2.310 2.799 1.00 8.15 O
ATOM 3 C3' A B 7 -7.844 -2.354 4.803 1.00 10.58 C
ATOM 4 O3' A B 7 -8.737 -2.499 5.888 1.00 13.12 O
ATOM 5 C2' A B 7 -7.685 -3.669 4.052 1.00 9.11 C
ATOM 6 O2' A B 7 -7.673 -4.797 4.904 1.00 10.26 O
ATOM 7 C1' A B 7 -8.939 -3.654 3.187 1.00 8.69 C
ATOM 8 N9 A B 7 -8.783 -4.435 1.971 1.00 8.35 N
ATOM 9 C8 A B 7 -7.925 -4.165 0.943 1.00 8.49 C
ATOM 10 N7 A B 7 -7.986 -5.034 -0.036 1.00 8.38 N
ATOM 11 C5 A B 7 -8.952 -5.934 0.380 1.00 8.18 C
ATOM 12 C6 A B 7 -9.479 -7.098 -0.214 1.00 8.75 C
ATOM 13 N6 A B 7 -9.085 -7.561 -1.404 1.00 9.52 N
ATOM 14 N1 A B 7 -10.433 -7.764 0.466 1.00 9.73 N
ATOM 15 C2 A B 7 -10.824 -7.298 1.658 1.00 9.72 C
ATOM 16 N3 A B 7 -10.401 -6.221 2.318 1.00 9.16 N
ATOM 17 C4 A B 7 -9.455 -5.580 1.617 1.00 8.51 C
ATOM 18 P A B 7 -5.567 -0.922 1.402 0.50 9.30 P
ATOM 19 OP1 A B 7 -6.445 -1.436 0.331 0.50 9.62 O
ATOM 20 OP2 A B 7 -5.155 0.497 1.396 0.50 10.97 O
ATOM 21 O5' A B 7 -6.269 -1.221 2.802 0.50 9.65 O
ATOM 22 C5' A B 7 -7.478 -0.524 3.080 0.50 10.20 C
ATOM 23 C4' A B 7 -8.472 -1.438 3.765 0.50 9.70 C
ATOM 24 P G B 8 -8.810 -1.349 6.992 1.00 13.86 P
ATOM 25 OP1 G B 8 -7.867 -0.271 6.602 1.00 16.76 O
ATOM 26 OP2 G B 8 -8.647 -1.994 8.314 1.00 14.43 O
ATOM 27 O5' G B 8 -10.282 -0.746 6.839 1.00 16.03 O
TER
ATOM 2 P U A 6 -4.056 -4.262 5.981 1.00 8.90 P
ATOM 3 OP1 U A 6 -3.633 -3.007 6.642 1.00 11.51 O
ATOM 4 OP2 U A 6 -5.388 -4.833 6.273 1.00 9.53 O
ATOM 5 O5' U A 6 -3.960 -4.104 4.393 1.00 7.97 O
ATOM 6 C5' U A 6 -2.827 -3.505 3.786 1.00 8.49 C
ATOM 7 C4' U A 6 -2.927 -3.661 2.282 1.00 8.43 C
ATOM 8 O4' U A 6 -2.873 -5.071 1.951 1.00 8.06 O
ATOM 9 C3' U A 6 -4.239 -3.193 1.664 1.00 7.87 C
ATOM 10 O3' U A 6 -4.215 -1.808 1.376 1.00 8.73 O
ATOM 11 C2' U A 6 -4.238 -3.977 0.360 1.00 7.82 C
ATOM 12 O2' U A 6 -3.400 -3.383 -0.608 1.00 8.31 O
ATOM 13 C1' U A 6 -3.661 -5.316 0.803 1.00 8.32 C
ATOM 14 N1 U A 6 -4.738 -6.288 1.120 1.00 7.39 N
ATOM 15 C2 U A 6 -5.142 -7.142 0.120 1.00 8.03 C
ATOM 16 O2 U A 6 -4.644 -7.137 -0.991 1.00 9.25 O
ATOM 17 N3 U A 6 -6.148 -8.007 0.466 1.00 8.34 N
ATOM 18 C4 U A 6 -6.785 -8.088 1.689 1.00 8.13 C
ATOM 19 O4 U A 6 -7.677 -8.915 1.852 1.00 9.17 O
ATOM 20 C5 U A 6 -6.316 -7.157 2.683 1.00 7.75 C
ATOM 21 C6 U A 6 -5.330 -6.306 2.368 1.00 7.64 C
ATOM 22 P A A 7 -5.567 -0.922 1.402 0.50 9.30 P
ATOM 23 OP1 A A 7 -6.445 -1.436 0.331 0.50 9.62 O
ATOM 24 OP2 A A 7 -5.155 0.497 1.396 0.50 10.97 O
ATOM 25 O5' A A 7 -6.269 -1.221 2.802 0.50 9.65 O
TER
ATOM 1 O3' U B 6 -4.215 -1.808 1.376 1.00 8.73 O
ATOM 2 O4' A B 7 -9.114 -2.310 2.799 1.00 8.15 O
ATOM 3 C3' A B 7 -7.844 -2.354 4.803 1.00 10.58 C
ATOM 4 O3' A B 7 -8.737 -2.499 5.888 1.00 13.12 O
ATOM 5 C2' A B 7 -7.685 -3.669 4.052 1.00 9.11 C
ATOM 6 O2' A B 7 -7.673 -4.797 4.904 1.00 10.26 O
ATOM 7 C1' A B 7 -8.939 -3.654 3.187 1.00 8.69 C
ATOM 8 N9 A B 7 -8.783 -4.435 1.971 1.00 8.35 N
ATOM 9 C8 A B 7 -7.925 -4.165 0.943 1.00 8.49 C
ATOM 10 N7 A B 7 -7.986 -5.034 -0.036 1.00 8.38 N
ATOM 11 C5 A B 7 -8.952 -5.934 0.380 1.00 8.18 C
ATOM 12 C6 A B 7 -9.479 -7.098 -0.214 1.00 8.75 C
ATOM 13 N6 A B 7 -9.085 -7.561 -1.404 1.00 9.52 N
ATOM 14 N1 A B 7 -10.433 -7.764 0.466 1.00 9.73 N
ATOM 15 C2 A B 7 -10.824 -7.298 1.658 1.00 9.72 C
ATOM 16 N3 A B 7 -10.401 -6.221 2.318 1.00 9.16 N
ATOM 17 C4 A B 7 -9.455 -5.580 1.617 1.00 8.51 C
ATOM 18 P A B 7 -5.567 -0.922 1.402 0.50 9.30 P
ATOM 19 OP1 A B 7 -6.445 -1.436 0.331 0.50 9.62 O
ATOM 20 OP2 A B 7 -5.155 0.497 1.396 0.50 10.97 O
ATOM 21 O5' A B 7 -6.269 -1.221 2.802 0.50 9.65 O
ATOM 22 C5' A B 7 -7.478 -0.524 3.080 0.50 10.20 C
ATOM 23 C4' A B 7 -8.472 -1.438 3.765 0.50 9.70 C
ATOM 24 P G B 8 -8.810 -1.349 6.992 1.00 13.86 P
ATOM 25 OP1 G B 8 -7.867 -0.271 6.602 1.00 16.76 O
ATOM 26 OP2 G B 8 -8.647 -1.994 8.314 1.00 14.43 O
ATOM 27 O5' G B 8 -10.282 -0.746 6.839 1.00 16.03 O
TER
Atoms:
C4: (-6.785,-8.088,1.689)
N3: (-6.148,-8.007,0.466)
OP1: (-3.633,-3.007,6.642)
OP2: (-5.388,-4.833,6.273)
C2: (-5.142,-7.142,0.120)
C1': (-3.661,-5.316,0.803)
C3': (-4.239,-3.193,1.664)
O5': (-3.960,-4.104,4.393)
O4': (-2.873,-5.071,1.951)
C5': (-2.827,-3.505,3.786)
P: (-4.056,-4.262,5.981)
C4': (-2.927,-3.661,2.282)
C2': (-4.238,-3.977,0.360)
O2': (-3.400,-3.383,-0.608)
N1: (-4.738,-6.288,1.120)
O4: (-7.677,-8.915,1.852)
O2: (-4.644,-7.137,-0.991)
C6: (-5.330,-6.306,2.368)
C5: (-6.316,-7.157,2.683)
O3': (-4.215,-1.808,1.376)
N3: (-6.148,-8.007,0.466)
OP1: (-3.633,-3.007,6.642)
OP2: (-5.388,-4.833,6.273)
C2: (-5.142,-7.142,0.120)
C1': (-3.661,-5.316,0.803)
C3': (-4.239,-3.193,1.664)
O5': (-3.960,-4.104,4.393)
O4': (-2.873,-5.071,1.951)
C5': (-2.827,-3.505,3.786)
P: (-4.056,-4.262,5.981)
C4': (-2.927,-3.661,2.282)
C2': (-4.238,-3.977,0.360)
O2': (-3.400,-3.383,-0.608)
N1: (-4.738,-6.288,1.120)
O4: (-7.677,-8.915,1.852)
O2: (-4.644,-7.137,-0.991)
C6: (-5.330,-6.306,2.368)
C5: (-6.316,-7.157,2.683)
O3': (-4.215,-1.808,1.376)
OP1: (-6.445,-1.436,0.331)
OP2: (-5.155,0.497,1.396)
C3': (-7.844,-2.354,4.803)
C1': (-8.939,-3.654,3.187)
C5': (-7.478,-0.524,3.080)
O4': (-9.114,-2.310,2.799)
C8: (-7.925,-4.165,0.943)
O2': (-7.673,-4.797,4.904)
C6: (-9.479,-7.098,-0.214)
C5: (-8.952,-5.934,0.380)
C4: (-9.455,-5.580,1.617)
N9: (-8.783,-4.435,1.971)
C4': (-8.472,-1.438,3.765)
C2': (-7.685,-3.669,4.052)
C2: (-10.824,-7.298,1.658)
N1: (-10.433,-7.764,0.466)
N3: (-10.401,-6.221,2.318)
N6: (-9.085,-7.561,-1.404)
N7: (-7.986,-5.034,-0.036)
P: (-5.567,-0.922,1.402)
O5': (-6.269,-1.221,2.802)
O3': (-8.737,-2.499,5.888)
OP2: (-5.155,0.497,1.396)
C3': (-7.844,-2.354,4.803)
C1': (-8.939,-3.654,3.187)
C5': (-7.478,-0.524,3.080)
O4': (-9.114,-2.310,2.799)
C8: (-7.925,-4.165,0.943)
O2': (-7.673,-4.797,4.904)
C6: (-9.479,-7.098,-0.214)
C5: (-8.952,-5.934,0.380)
C4: (-9.455,-5.580,1.617)
N9: (-8.783,-4.435,1.971)
C4': (-8.472,-1.438,3.765)
C2': (-7.685,-3.669,4.052)
C2: (-10.824,-7.298,1.658)
N1: (-10.433,-7.764,0.466)
N3: (-10.401,-6.221,2.318)
N6: (-9.085,-7.561,-1.404)
N7: (-7.986,-5.034,-0.036)
P: (-5.567,-0.922,1.402)
O5': (-6.269,-1.221,2.802)
O3': (-8.737,-2.499,5.888)
Image (generated by PyMOL):