Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A116:A286
Extra
PDB:
ATOM 1 O3' G A 115 -51.476 2.904 -51.413 1.00 15.65 O
ATOM 2 P U A 116 -51.707 3.779 -50.095 1.00 29.39 P
ATOM 3 OP1 U A 116 -51.192 2.995 -48.951 1.00 29.39 O
ATOM 4 OP2 U A 116 -53.125 4.215 -50.086 1.00 29.39 O
ATOM 5 O5' U A 116 -50.761 5.007 -50.362 1.00 29.39 O
ATOM 6 C5' U A 116 -49.473 4.797 -50.916 1.00 29.39 C
ATOM 7 C4' U A 116 -49.090 5.899 -51.860 1.00 29.39 C
ATOM 8 O4' U A 116 -49.985 5.913 -53.002 1.00 29.39 O
ATOM 9 C3' U A 116 -49.196 7.313 -51.314 1.00 29.39 C
ATOM 10 O3' U A 116 -48.134 7.663 -50.453 1.00 29.39 O
ATOM 11 C2' U A 116 -49.220 8.120 -52.585 1.00 29.39 C
ATOM 12 O2' U A 116 -47.920 8.189 -53.137 1.00 29.39 O
ATOM 13 C1' U A 116 -50.090 7.236 -53.482 1.00 29.39 C
ATOM 14 N1 U A 116 -51.506 7.661 -53.450 1.00 29.33 N
ATOM 15 C2 U A 116 -51.745 8.778 -54.218 1.00 29.33 C
ATOM 16 O2 U A 116 -50.873 9.332 -54.859 1.00 29.33 O
ATOM 17 N3 U A 116 -53.025 9.242 -54.226 1.00 29.33 N
ATOM 18 C4 U A 116 -54.078 8.723 -53.537 1.00 29.33 C
ATOM 19 O4 U A 116 -55.159 9.294 -53.677 1.00 29.33 O
ATOM 20 C5 U A 116 -53.765 7.566 -52.739 1.00 29.33 C
ATOM 21 C6 U A 116 -52.514 7.084 -52.718 1.00 29.33 C
ATOM 22 P A A 117 -48.415 7.918 -48.895 1.00 26.38 P
ATOM 23 OP1 A A 117 -47.335 7.238 -48.138 1.00 26.38 O
ATOM 24 OP2 A A 117 -49.819 7.538 -48.647 1.00 26.38 O
ATOM 25 O5' A A 117 -48.265 9.475 -48.755 1.00 26.38 O
TER
ATOM 1 O3' U B 285 -60.927 8.111 -48.306 1.00 19.51 O
ATOM 2 P A B 286 -60.578 7.624 -49.790 1.00 22.25 P
ATOM 3 OP1 A B 286 -61.865 7.495 -50.528 1.00 22.25 O
ATOM 4 OP2 A B 286 -59.696 6.448 -49.663 1.00 22.25 O
ATOM 5 O5' A B 286 -59.751 8.833 -50.379 1.00 22.25 O
ATOM 6 C5' A B 286 -60.398 9.934 -50.982 1.00 22.25 C
ATOM 7 C4' A B 286 -59.392 10.871 -51.580 1.00 22.25 C
ATOM 8 O4' A B 286 -58.428 11.275 -50.573 1.00 22.25 O
ATOM 9 C3' A B 286 -58.550 10.285 -52.684 1.00 22.25 C
ATOM 10 O3' A B 286 -59.215 10.314 -53.913 1.00 22.25 O
ATOM 11 C2' A B 286 -57.310 11.150 -52.654 1.00 22.25 C
ATOM 12 O2' A B 286 -57.550 12.389 -53.312 1.00 22.25 O
ATOM 13 C1' A B 286 -57.155 11.401 -51.156 1.00 22.25 C
ATOM 14 N9 A B 286 -56.285 10.415 -50.529 1.00 22.09 N
ATOM 15 C8 A B 286 -56.722 9.351 -49.803 1.00 22.09 C
ATOM 16 N7 A B 286 -55.755 8.615 -49.331 1.00 22.09 N
ATOM 17 C5 A B 286 -54.611 9.246 -49.784 1.00 22.09 C
ATOM 18 C6 A B 286 -53.257 8.932 -49.617 1.00 22.09 C
ATOM 19 N6 A B 286 -52.867 7.864 -48.921 1.00 22.09 N
ATOM 20 N1 A B 286 -52.342 9.755 -50.187 1.00 22.09 N
ATOM 21 C2 A B 286 -52.797 10.817 -50.870 1.00 22.09 C
ATOM 22 N3 A B 286 -54.049 11.212 -51.106 1.00 22.09 N
ATOM 23 C4 A B 286 -54.920 10.371 -50.527 1.00 22.09 C
ATOM 24 P G B 287 -59.332 8.989 -54.779 1.00 15.54 P
ATOM 25 OP1 G B 287 -60.544 9.129 -55.626 1.00 15.54 O
ATOM 26 OP2 G B 287 -59.247 7.855 -53.849 1.00 15.54 O
ATOM 27 O5' G B 287 -58.019 9.056 -55.681 1.00 15.54 O
TER
ATOM 2 P U A 116 -51.707 3.779 -50.095 1.00 29.39 P
ATOM 3 OP1 U A 116 -51.192 2.995 -48.951 1.00 29.39 O
ATOM 4 OP2 U A 116 -53.125 4.215 -50.086 1.00 29.39 O
ATOM 5 O5' U A 116 -50.761 5.007 -50.362 1.00 29.39 O
ATOM 6 C5' U A 116 -49.473 4.797 -50.916 1.00 29.39 C
ATOM 7 C4' U A 116 -49.090 5.899 -51.860 1.00 29.39 C
ATOM 8 O4' U A 116 -49.985 5.913 -53.002 1.00 29.39 O
ATOM 9 C3' U A 116 -49.196 7.313 -51.314 1.00 29.39 C
ATOM 10 O3' U A 116 -48.134 7.663 -50.453 1.00 29.39 O
ATOM 11 C2' U A 116 -49.220 8.120 -52.585 1.00 29.39 C
ATOM 12 O2' U A 116 -47.920 8.189 -53.137 1.00 29.39 O
ATOM 13 C1' U A 116 -50.090 7.236 -53.482 1.00 29.39 C
ATOM 14 N1 U A 116 -51.506 7.661 -53.450 1.00 29.33 N
ATOM 15 C2 U A 116 -51.745 8.778 -54.218 1.00 29.33 C
ATOM 16 O2 U A 116 -50.873 9.332 -54.859 1.00 29.33 O
ATOM 17 N3 U A 116 -53.025 9.242 -54.226 1.00 29.33 N
ATOM 18 C4 U A 116 -54.078 8.723 -53.537 1.00 29.33 C
ATOM 19 O4 U A 116 -55.159 9.294 -53.677 1.00 29.33 O
ATOM 20 C5 U A 116 -53.765 7.566 -52.739 1.00 29.33 C
ATOM 21 C6 U A 116 -52.514 7.084 -52.718 1.00 29.33 C
ATOM 22 P A A 117 -48.415 7.918 -48.895 1.00 26.38 P
ATOM 23 OP1 A A 117 -47.335 7.238 -48.138 1.00 26.38 O
ATOM 24 OP2 A A 117 -49.819 7.538 -48.647 1.00 26.38 O
ATOM 25 O5' A A 117 -48.265 9.475 -48.755 1.00 26.38 O
TER
ATOM 1 O3' U B 285 -60.927 8.111 -48.306 1.00 19.51 O
ATOM 2 P A B 286 -60.578 7.624 -49.790 1.00 22.25 P
ATOM 3 OP1 A B 286 -61.865 7.495 -50.528 1.00 22.25 O
ATOM 4 OP2 A B 286 -59.696 6.448 -49.663 1.00 22.25 O
ATOM 5 O5' A B 286 -59.751 8.833 -50.379 1.00 22.25 O
ATOM 6 C5' A B 286 -60.398 9.934 -50.982 1.00 22.25 C
ATOM 7 C4' A B 286 -59.392 10.871 -51.580 1.00 22.25 C
ATOM 8 O4' A B 286 -58.428 11.275 -50.573 1.00 22.25 O
ATOM 9 C3' A B 286 -58.550 10.285 -52.684 1.00 22.25 C
ATOM 10 O3' A B 286 -59.215 10.314 -53.913 1.00 22.25 O
ATOM 11 C2' A B 286 -57.310 11.150 -52.654 1.00 22.25 C
ATOM 12 O2' A B 286 -57.550 12.389 -53.312 1.00 22.25 O
ATOM 13 C1' A B 286 -57.155 11.401 -51.156 1.00 22.25 C
ATOM 14 N9 A B 286 -56.285 10.415 -50.529 1.00 22.09 N
ATOM 15 C8 A B 286 -56.722 9.351 -49.803 1.00 22.09 C
ATOM 16 N7 A B 286 -55.755 8.615 -49.331 1.00 22.09 N
ATOM 17 C5 A B 286 -54.611 9.246 -49.784 1.00 22.09 C
ATOM 18 C6 A B 286 -53.257 8.932 -49.617 1.00 22.09 C
ATOM 19 N6 A B 286 -52.867 7.864 -48.921 1.00 22.09 N
ATOM 20 N1 A B 286 -52.342 9.755 -50.187 1.00 22.09 N
ATOM 21 C2 A B 286 -52.797 10.817 -50.870 1.00 22.09 C
ATOM 22 N3 A B 286 -54.049 11.212 -51.106 1.00 22.09 N
ATOM 23 C4 A B 286 -54.920 10.371 -50.527 1.00 22.09 C
ATOM 24 P G B 287 -59.332 8.989 -54.779 1.00 15.54 P
ATOM 25 OP1 G B 287 -60.544 9.129 -55.626 1.00 15.54 O
ATOM 26 OP2 G B 287 -59.247 7.855 -53.849 1.00 15.54 O
ATOM 27 O5' G B 287 -58.019 9.056 -55.681 1.00 15.54 O
TER
Atoms:
C4: (-54.078,8.723,-53.537)
N3: (-53.025,9.242,-54.226)
OP1: (-51.192,2.995,-48.951)
OP2: (-53.125,4.215,-50.086)
C2: (-51.745,8.778,-54.218)
C1': (-50.090,7.236,-53.482)
C3': (-49.196,7.313,-51.314)
O5': (-50.761,5.007,-50.362)
O4': (-49.985,5.913,-53.002)
C5': (-49.473,4.797,-50.916)
P: (-51.707,3.779,-50.095)
C4': (-49.090,5.899,-51.860)
C2': (-49.220,8.120,-52.585)
O2': (-47.920,8.189,-53.137)
N1: (-51.506,7.661,-53.450)
O4: (-55.159,9.294,-53.677)
O2: (-50.873,9.332,-54.859)
C6: (-52.514,7.084,-52.718)
C5: (-53.765,7.566,-52.739)
O3': (-48.134,7.663,-50.453)
N3: (-53.025,9.242,-54.226)
OP1: (-51.192,2.995,-48.951)
OP2: (-53.125,4.215,-50.086)
C2: (-51.745,8.778,-54.218)
C1': (-50.090,7.236,-53.482)
C3': (-49.196,7.313,-51.314)
O5': (-50.761,5.007,-50.362)
O4': (-49.985,5.913,-53.002)
C5': (-49.473,4.797,-50.916)
P: (-51.707,3.779,-50.095)
C4': (-49.090,5.899,-51.860)
C2': (-49.220,8.120,-52.585)
O2': (-47.920,8.189,-53.137)
N1: (-51.506,7.661,-53.450)
O4: (-55.159,9.294,-53.677)
O2: (-50.873,9.332,-54.859)
C6: (-52.514,7.084,-52.718)
C5: (-53.765,7.566,-52.739)
O3': (-48.134,7.663,-50.453)
OP1: (-61.865,7.495,-50.528)
OP2: (-59.696,6.448,-49.663)
C3': (-58.550,10.285,-52.684)
C1': (-57.155,11.401,-51.156)
C5': (-60.398,9.934,-50.982)
O4': (-58.428,11.275,-50.573)
C8: (-56.722,9.351,-49.803)
O2': (-57.550,12.389,-53.312)
C6: (-53.257,8.932,-49.617)
C5: (-54.611,9.246,-49.784)
C4: (-54.920,10.371,-50.527)
P: (-60.578,7.624,-49.790)
C4': (-59.392,10.871,-51.580)
C2': (-57.310,11.150,-52.654)
C2: (-52.797,10.817,-50.870)
N1: (-52.342,9.755,-50.187)
N3: (-54.049,11.212,-51.106)
N6: (-52.867,7.864,-48.921)
N7: (-55.755,8.615,-49.331)
N9: (-56.285,10.415,-50.529)
O5': (-59.751,8.833,-50.379)
O3': (-59.215,10.314,-53.913)
OP2: (-59.696,6.448,-49.663)
C3': (-58.550,10.285,-52.684)
C1': (-57.155,11.401,-51.156)
C5': (-60.398,9.934,-50.982)
O4': (-58.428,11.275,-50.573)
C8: (-56.722,9.351,-49.803)
O2': (-57.550,12.389,-53.312)
C6: (-53.257,8.932,-49.617)
C5: (-54.611,9.246,-49.784)
C4: (-54.920,10.371,-50.527)
P: (-60.578,7.624,-49.790)
C4': (-59.392,10.871,-51.580)
C2': (-57.310,11.150,-52.654)
C2: (-52.797,10.817,-50.870)
N1: (-52.342,9.755,-50.187)
N3: (-54.049,11.212,-51.106)
N6: (-52.867,7.864,-48.921)
N7: (-55.755,8.615,-49.331)
N9: (-56.285,10.415,-50.529)
O5': (-59.751,8.833,-50.379)
O3': (-59.215,10.314,-53.913)
Image (generated by PyMOL):