Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:13058:13057
Extra
PDB:
ATOM 1 O3' A A3057 37.696 52.458 53.806 1.00 45.52 O
ATOM 2 P U A3058 36.855 51.492 54.753 1.00 44.29 P
ATOM 3 OP1 U A3058 36.529 50.316 53.944 1.00 43.91 O
ATOM 4 OP2 U A3058 35.778 52.293 55.324 1.00 44.63 O
ATOM 5 O5' U A3058 37.891 51.083 55.908 1.00 44.03 O
ATOM 6 C5' U A3058 39.090 50.354 55.634 1.00 43.71 C
ATOM 7 C4' U A3058 39.992 50.253 56.851 1.00 43.59 C
ATOM 8 O4' U A3058 40.382 51.572 57.319 1.00 44.05 O
ATOM 9 C3' U A3058 39.405 49.605 58.087 1.00 43.33 C
ATOM 10 O3' U A3058 39.355 48.186 57.979 1.00 42.83 O
ATOM 11 C2' U A3058 40.356 50.097 59.178 1.00 43.45 C
ATOM 12 O2' U A3058 41.545 49.338 59.175 1.00 43.13 O
ATOM 13 C1' U A3058 40.686 51.515 58.705 1.00 43.98 C
ATOM 14 N1 U A3058 39.888 52.544 59.452 1.00 44.38 N
ATOM 15 C2 U A3058 38.658 52.902 58.912 1.00 44.58 C
ATOM 16 O2 U A3058 38.247 52.497 57.887 1.00 44.47 O
ATOM 17 N3 U A3058 37.815 53.780 59.489 1.00 44.95 N
ATOM 18 C4 U A3058 38.107 54.341 60.671 1.00 45.14 C
ATOM 19 O4 U A3058 37.192 55.098 61.048 1.00 45.48 O
ATOM 20 C5 U A3058 39.420 53.951 61.256 1.00 44.92 C
ATOM 21 C6 U A3058 40.252 53.073 60.662 1.00 44.55 C
ATOM 22 P A A3059 38.584 47.276 59.086 1.00 47.63 P
ATOM 23 OP1 A A3059 38.631 45.893 58.575 1.00 47.17 O
ATOM 24 OP2 A A3059 37.272 47.891 59.345 1.00 47.90 O
ATOM 25 O5' A A3059 39.513 47.412 60.378 1.00 47.62 O
TER
ATOM 1 O3' U B3056 35.428 57.906 52.303 1.00 55.17 O
ATOM 2 P A B3057 34.982 56.517 52.971 1.00 47.34 P
ATOM 3 OP1 A B3057 34.372 55.705 51.891 1.00 47.12 O
ATOM 4 OP2 A B3057 34.185 56.835 54.190 1.00 47.45 O
ATOM 5 O5' A B3057 36.368 55.889 53.422 1.00 46.96 O
ATOM 6 C5' A B3057 37.247 55.292 52.487 1.00 46.73 C
ATOM 7 C4' A B3057 38.423 54.689 53.181 1.00 46.38 C
ATOM 8 O4' A B3057 39.130 55.716 53.888 1.00 46.72 O
ATOM 9 C3' A B3057 38.108 53.710 54.276 1.00 45.96 C
ATOM 10 O3' A B3057 37.696 52.458 53.806 1.00 45.52 O
ATOM 11 C2' A B3057 39.410 53.678 55.043 1.00 45.84 C
ATOM 12 O2' A B3057 40.383 52.948 54.325 1.00 45.55 O
ATOM 13 C1' A B3057 39.781 55.152 55.006 1.00 46.41 C
ATOM 14 N9 A B3057 39.326 55.863 56.208 1.00 46.66 N
ATOM 15 C8 A B3057 38.176 56.571 56.399 1.00 47.00 C
ATOM 16 N7 A B3057 38.040 57.090 57.593 1.00 47.18 N
ATOM 17 C5 A B3057 39.184 56.691 58.230 1.00 46.94 C
ATOM 18 C6 A B3057 39.660 56.910 59.527 1.00 46.98 C
ATOM 19 N6 A B3057 39.058 57.647 60.449 1.00 47.30 N
ATOM 20 N1 A B3057 40.831 56.336 59.843 1.00 46.70 N
ATOM 21 C2 A B3057 41.493 55.630 58.915 1.00 46.40 C
ATOM 22 N3 A B3057 41.156 55.360 57.661 1.00 46.34 N
ATOM 23 C4 A B3057 39.980 55.931 57.387 1.00 46.62 C
ATOM 24 P U B3058 36.855 51.492 54.753 1.00 44.29 P
ATOM 25 OP1 U B3058 36.529 50.316 53.944 1.00 43.91 O
ATOM 26 OP2 U B3058 35.778 52.293 55.324 1.00 44.63 O
ATOM 27 O5' U B3058 37.891 51.083 55.908 1.00 44.03 O
TER
ATOM 2 P U A3058 36.855 51.492 54.753 1.00 44.29 P
ATOM 3 OP1 U A3058 36.529 50.316 53.944 1.00 43.91 O
ATOM 4 OP2 U A3058 35.778 52.293 55.324 1.00 44.63 O
ATOM 5 O5' U A3058 37.891 51.083 55.908 1.00 44.03 O
ATOM 6 C5' U A3058 39.090 50.354 55.634 1.00 43.71 C
ATOM 7 C4' U A3058 39.992 50.253 56.851 1.00 43.59 C
ATOM 8 O4' U A3058 40.382 51.572 57.319 1.00 44.05 O
ATOM 9 C3' U A3058 39.405 49.605 58.087 1.00 43.33 C
ATOM 10 O3' U A3058 39.355 48.186 57.979 1.00 42.83 O
ATOM 11 C2' U A3058 40.356 50.097 59.178 1.00 43.45 C
ATOM 12 O2' U A3058 41.545 49.338 59.175 1.00 43.13 O
ATOM 13 C1' U A3058 40.686 51.515 58.705 1.00 43.98 C
ATOM 14 N1 U A3058 39.888 52.544 59.452 1.00 44.38 N
ATOM 15 C2 U A3058 38.658 52.902 58.912 1.00 44.58 C
ATOM 16 O2 U A3058 38.247 52.497 57.887 1.00 44.47 O
ATOM 17 N3 U A3058 37.815 53.780 59.489 1.00 44.95 N
ATOM 18 C4 U A3058 38.107 54.341 60.671 1.00 45.14 C
ATOM 19 O4 U A3058 37.192 55.098 61.048 1.00 45.48 O
ATOM 20 C5 U A3058 39.420 53.951 61.256 1.00 44.92 C
ATOM 21 C6 U A3058 40.252 53.073 60.662 1.00 44.55 C
ATOM 22 P A A3059 38.584 47.276 59.086 1.00 47.63 P
ATOM 23 OP1 A A3059 38.631 45.893 58.575 1.00 47.17 O
ATOM 24 OP2 A A3059 37.272 47.891 59.345 1.00 47.90 O
ATOM 25 O5' A A3059 39.513 47.412 60.378 1.00 47.62 O
TER
ATOM 1 O3' U B3056 35.428 57.906 52.303 1.00 55.17 O
ATOM 2 P A B3057 34.982 56.517 52.971 1.00 47.34 P
ATOM 3 OP1 A B3057 34.372 55.705 51.891 1.00 47.12 O
ATOM 4 OP2 A B3057 34.185 56.835 54.190 1.00 47.45 O
ATOM 5 O5' A B3057 36.368 55.889 53.422 1.00 46.96 O
ATOM 6 C5' A B3057 37.247 55.292 52.487 1.00 46.73 C
ATOM 7 C4' A B3057 38.423 54.689 53.181 1.00 46.38 C
ATOM 8 O4' A B3057 39.130 55.716 53.888 1.00 46.72 O
ATOM 9 C3' A B3057 38.108 53.710 54.276 1.00 45.96 C
ATOM 10 O3' A B3057 37.696 52.458 53.806 1.00 45.52 O
ATOM 11 C2' A B3057 39.410 53.678 55.043 1.00 45.84 C
ATOM 12 O2' A B3057 40.383 52.948 54.325 1.00 45.55 O
ATOM 13 C1' A B3057 39.781 55.152 55.006 1.00 46.41 C
ATOM 14 N9 A B3057 39.326 55.863 56.208 1.00 46.66 N
ATOM 15 C8 A B3057 38.176 56.571 56.399 1.00 47.00 C
ATOM 16 N7 A B3057 38.040 57.090 57.593 1.00 47.18 N
ATOM 17 C5 A B3057 39.184 56.691 58.230 1.00 46.94 C
ATOM 18 C6 A B3057 39.660 56.910 59.527 1.00 46.98 C
ATOM 19 N6 A B3057 39.058 57.647 60.449 1.00 47.30 N
ATOM 20 N1 A B3057 40.831 56.336 59.843 1.00 46.70 N
ATOM 21 C2 A B3057 41.493 55.630 58.915 1.00 46.40 C
ATOM 22 N3 A B3057 41.156 55.360 57.661 1.00 46.34 N
ATOM 23 C4 A B3057 39.980 55.931 57.387 1.00 46.62 C
ATOM 24 P U B3058 36.855 51.492 54.753 1.00 44.29 P
ATOM 25 OP1 U B3058 36.529 50.316 53.944 1.00 43.91 O
ATOM 26 OP2 U B3058 35.778 52.293 55.324 1.00 44.63 O
ATOM 27 O5' U B3058 37.891 51.083 55.908 1.00 44.03 O
TER
Atoms:
C4: (38.107,54.341,60.671)
N3: (37.815,53.780,59.489)
OP1: (36.529,50.316,53.944)
OP2: (35.778,52.293,55.324)
C2: (38.658,52.902,58.912)
C1': (40.686,51.515,58.705)
C3': (39.405,49.605,58.087)
O5': (37.891,51.083,55.908)
O4': (40.382,51.572,57.319)
C5': (39.090,50.354,55.634)
P: (36.855,51.492,54.753)
C4': (39.992,50.253,56.851)
C2': (40.356,50.097,59.178)
O2': (41.545,49.338,59.175)
N1: (39.888,52.544,59.452)
O4: (37.192,55.098,61.048)
O2: (38.247,52.497,57.887)
C6: (40.252,53.073,60.662)
C5: (39.420,53.951,61.256)
O3': (39.355,48.186,57.979)
N3: (37.815,53.780,59.489)
OP1: (36.529,50.316,53.944)
OP2: (35.778,52.293,55.324)
C2: (38.658,52.902,58.912)
C1': (40.686,51.515,58.705)
C3': (39.405,49.605,58.087)
O5': (37.891,51.083,55.908)
O4': (40.382,51.572,57.319)
C5': (39.090,50.354,55.634)
P: (36.855,51.492,54.753)
C4': (39.992,50.253,56.851)
C2': (40.356,50.097,59.178)
O2': (41.545,49.338,59.175)
N1: (39.888,52.544,59.452)
O4: (37.192,55.098,61.048)
O2: (38.247,52.497,57.887)
C6: (40.252,53.073,60.662)
C5: (39.420,53.951,61.256)
O3': (39.355,48.186,57.979)
OP1: (34.372,55.705,51.891)
OP2: (34.185,56.835,54.190)
C3': (38.108,53.710,54.276)
C1': (39.781,55.152,55.006)
C5': (37.247,55.292,52.487)
O4': (39.130,55.716,53.888)
C8: (38.176,56.571,56.399)
O2': (40.383,52.948,54.325)
C6: (39.660,56.910,59.527)
C5: (39.184,56.691,58.230)
C4: (39.980,55.931,57.387)
P: (34.982,56.517,52.971)
C4': (38.423,54.689,53.181)
C2': (39.410,53.678,55.043)
C2: (41.493,55.630,58.915)
N1: (40.831,56.336,59.843)
N3: (41.156,55.360,57.661)
N6: (39.058,57.647,60.449)
N7: (38.040,57.090,57.593)
N9: (39.326,55.863,56.208)
O5': (36.368,55.889,53.422)
O3': (37.696,52.458,53.806)
OP2: (34.185,56.835,54.190)
C3': (38.108,53.710,54.276)
C1': (39.781,55.152,55.006)
C5': (37.247,55.292,52.487)
O4': (39.130,55.716,53.888)
C8: (38.176,56.571,56.399)
O2': (40.383,52.948,54.325)
C6: (39.660,56.910,59.527)
C5: (39.184,56.691,58.230)
C4: (39.980,55.931,57.387)
P: (34.982,56.517,52.971)
C4': (38.423,54.689,53.181)
C2': (39.410,53.678,55.043)
C2: (41.493,55.630,58.915)
N1: (40.831,56.336,59.843)
N3: (41.156,55.360,57.661)
N6: (39.058,57.647,60.449)
N7: (38.040,57.090,57.593)
N9: (39.326,55.863,56.208)
O5': (36.368,55.889,53.422)
O3': (37.696,52.458,53.806)
Image (generated by PyMOL):