Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW5:A6:A7
Extra
PDB:
ATOM 1 O3' C A 5 -5.370 56.101 -19.435 1.00 7.62 O
ATOM 2 P U A 6 -4.284 54.980 -19.097 1.00 8.34 P
ATOM 3 OP1 U A 6 -3.035 55.414 -19.760 1.00 10.86 O
ATOM 4 OP2 U A 6 -4.853 53.648 -19.392 1.00 9.13 O
ATOM 5 O5' U A 6 -4.114 55.066 -17.509 1.00 7.74 O
ATOM 6 C5' U A 6 -3.503 56.192 -16.901 1.00 8.32 C
ATOM 7 C4' U A 6 -3.652 56.089 -15.397 1.00 7.92 C
ATOM 8 O4' U A 6 -5.057 56.141 -15.054 1.00 7.50 O
ATOM 9 C3' U A 6 -3.173 54.778 -14.790 1.00 7.57 C
ATOM 10 O3' U A 6 -1.761 54.809 -14.584 1.00 8.38 O
ATOM 11 C2' U A 6 -3.945 54.774 -13.475 1.00 7.59 C
ATOM 12 O2' U A 6 -3.366 55.621 -12.506 1.00 8.26 O
ATOM 13 C1' U A 6 -5.292 55.348 -13.908 1.00 7.45 C
ATOM 14 N1 U A 6 -6.279 54.287 -14.233 1.00 7.18 N
ATOM 15 C2 U A 6 -7.129 53.874 -13.233 1.00 7.78 C
ATOM 16 O2 U A 6 -7.101 54.349 -12.115 1.00 8.74 O
ATOM 17 N3 U A 6 -8.014 52.891 -13.588 1.00 7.85 N
ATOM 18 C4 U A 6 -8.118 52.281 -14.823 1.00 7.66 C
ATOM 19 O4 U A 6 -8.960 51.406 -14.991 1.00 9.00 O
ATOM 20 C5 U A 6 -7.187 52.756 -15.817 1.00 7.30 C
ATOM 21 C6 U A 6 -6.322 53.724 -15.491 1.00 7.20 C
ATOM 22 P A A 7 -0.889 53.457 -14.518 1.00 10.68 P
ATOM 23 OP1 A A 7 -1.390 52.616 -13.411 1.00 12.30 O
ATOM 24 OP2 A A 7 0.529 53.872 -14.578 1.00 12.51 O
ATOM 25 O5' A A 7 -1.263 52.734 -15.885 1.00 9.67 O
TER
ATOM 1 O3' U B 6 -1.761 54.809 -14.584 1.00 8.38 O
ATOM 2 P A B 7 -0.889 53.457 -14.518 1.00 10.68 P
ATOM 3 OP1 A B 7 -1.390 52.616 -13.411 1.00 12.30 O
ATOM 4 OP2 A B 7 0.529 53.872 -14.578 1.00 12.51 O
ATOM 5 O5' A B 7 -1.263 52.734 -15.885 1.00 9.67 O
ATOM 6 C5' A B 7 -0.517 51.597 -16.287 1.00 9.87 C
ATOM 7 C4' A B 7 -1.423 50.582 -16.956 1.00 9.41 C
ATOM 8 O4' A B 7 -2.279 49.969 -15.958 1.00 8.05 O
ATOM 9 C3' A B 7 -2.366 51.140 -18.019 1.00 10.33 C
ATOM 10 O3' A B 7 -2.590 50.179 -19.035 1.00 13.56 O
ATOM 11 C2' A B 7 -3.655 51.340 -17.231 1.00 8.74 C
ATOM 12 O2' A B 7 -4.810 51.347 -18.050 1.00 9.55 O
ATOM 13 C1' A B 7 -3.626 50.098 -16.349 1.00 8.14 C
ATOM 14 N9 A B 7 -4.429 50.242 -15.144 1.00 7.72 N
ATOM 15 C8 A B 7 -4.163 51.071 -14.091 1.00 7.89 C
ATOM 16 N7 A B 7 -5.055 51.010 -13.133 1.00 8.05 N
ATOM 17 C5 A B 7 -5.970 50.078 -13.595 1.00 8.10 C
ATOM 18 C6 A B 7 -7.156 49.569 -13.036 1.00 8.59 C
ATOM 19 N6 A B 7 -7.623 49.957 -11.845 1.00 9.28 N
ATOM 20 N1 A B 7 -7.835 48.646 -13.749 1.00 9.39 N
ATOM 21 C2 A B 7 -7.354 48.266 -14.940 1.00 9.56 C
ATOM 22 N3 A B 7 -6.253 48.677 -15.567 1.00 8.92 N
ATOM 23 C4 A B 7 -5.599 49.591 -14.834 1.00 7.83 C
ATOM 24 P G B 8 -1.630 49.983 -20.295 1.00 14.40 P
ATOM 25 OP1 G B 8 -0.223 50.137 -19.873 1.00 18.82 O
ATOM 26 OP2 G B 8 -2.153 50.777 -21.423 1.00 16.65 O
ATOM 27 O5' G B 8 -1.960 48.457 -20.670 1.00 16.61 O
TER
ATOM 2 P U A 6 -4.284 54.980 -19.097 1.00 8.34 P
ATOM 3 OP1 U A 6 -3.035 55.414 -19.760 1.00 10.86 O
ATOM 4 OP2 U A 6 -4.853 53.648 -19.392 1.00 9.13 O
ATOM 5 O5' U A 6 -4.114 55.066 -17.509 1.00 7.74 O
ATOM 6 C5' U A 6 -3.503 56.192 -16.901 1.00 8.32 C
ATOM 7 C4' U A 6 -3.652 56.089 -15.397 1.00 7.92 C
ATOM 8 O4' U A 6 -5.057 56.141 -15.054 1.00 7.50 O
ATOM 9 C3' U A 6 -3.173 54.778 -14.790 1.00 7.57 C
ATOM 10 O3' U A 6 -1.761 54.809 -14.584 1.00 8.38 O
ATOM 11 C2' U A 6 -3.945 54.774 -13.475 1.00 7.59 C
ATOM 12 O2' U A 6 -3.366 55.621 -12.506 1.00 8.26 O
ATOM 13 C1' U A 6 -5.292 55.348 -13.908 1.00 7.45 C
ATOM 14 N1 U A 6 -6.279 54.287 -14.233 1.00 7.18 N
ATOM 15 C2 U A 6 -7.129 53.874 -13.233 1.00 7.78 C
ATOM 16 O2 U A 6 -7.101 54.349 -12.115 1.00 8.74 O
ATOM 17 N3 U A 6 -8.014 52.891 -13.588 1.00 7.85 N
ATOM 18 C4 U A 6 -8.118 52.281 -14.823 1.00 7.66 C
ATOM 19 O4 U A 6 -8.960 51.406 -14.991 1.00 9.00 O
ATOM 20 C5 U A 6 -7.187 52.756 -15.817 1.00 7.30 C
ATOM 21 C6 U A 6 -6.322 53.724 -15.491 1.00 7.20 C
ATOM 22 P A A 7 -0.889 53.457 -14.518 1.00 10.68 P
ATOM 23 OP1 A A 7 -1.390 52.616 -13.411 1.00 12.30 O
ATOM 24 OP2 A A 7 0.529 53.872 -14.578 1.00 12.51 O
ATOM 25 O5' A A 7 -1.263 52.734 -15.885 1.00 9.67 O
TER
ATOM 1 O3' U B 6 -1.761 54.809 -14.584 1.00 8.38 O
ATOM 2 P A B 7 -0.889 53.457 -14.518 1.00 10.68 P
ATOM 3 OP1 A B 7 -1.390 52.616 -13.411 1.00 12.30 O
ATOM 4 OP2 A B 7 0.529 53.872 -14.578 1.00 12.51 O
ATOM 5 O5' A B 7 -1.263 52.734 -15.885 1.00 9.67 O
ATOM 6 C5' A B 7 -0.517 51.597 -16.287 1.00 9.87 C
ATOM 7 C4' A B 7 -1.423 50.582 -16.956 1.00 9.41 C
ATOM 8 O4' A B 7 -2.279 49.969 -15.958 1.00 8.05 O
ATOM 9 C3' A B 7 -2.366 51.140 -18.019 1.00 10.33 C
ATOM 10 O3' A B 7 -2.590 50.179 -19.035 1.00 13.56 O
ATOM 11 C2' A B 7 -3.655 51.340 -17.231 1.00 8.74 C
ATOM 12 O2' A B 7 -4.810 51.347 -18.050 1.00 9.55 O
ATOM 13 C1' A B 7 -3.626 50.098 -16.349 1.00 8.14 C
ATOM 14 N9 A B 7 -4.429 50.242 -15.144 1.00 7.72 N
ATOM 15 C8 A B 7 -4.163 51.071 -14.091 1.00 7.89 C
ATOM 16 N7 A B 7 -5.055 51.010 -13.133 1.00 8.05 N
ATOM 17 C5 A B 7 -5.970 50.078 -13.595 1.00 8.10 C
ATOM 18 C6 A B 7 -7.156 49.569 -13.036 1.00 8.59 C
ATOM 19 N6 A B 7 -7.623 49.957 -11.845 1.00 9.28 N
ATOM 20 N1 A B 7 -7.835 48.646 -13.749 1.00 9.39 N
ATOM 21 C2 A B 7 -7.354 48.266 -14.940 1.00 9.56 C
ATOM 22 N3 A B 7 -6.253 48.677 -15.567 1.00 8.92 N
ATOM 23 C4 A B 7 -5.599 49.591 -14.834 1.00 7.83 C
ATOM 24 P G B 8 -1.630 49.983 -20.295 1.00 14.40 P
ATOM 25 OP1 G B 8 -0.223 50.137 -19.873 1.00 18.82 O
ATOM 26 OP2 G B 8 -2.153 50.777 -21.423 1.00 16.65 O
ATOM 27 O5' G B 8 -1.960 48.457 -20.670 1.00 16.61 O
TER
Atoms:
C4: (-8.118,52.281,-14.823)
N3: (-8.014,52.891,-13.588)
OP1: (-3.035,55.414,-19.760)
OP2: (-4.853,53.648,-19.392)
C2: (-7.129,53.874,-13.233)
C1': (-5.292,55.348,-13.908)
C3': (-3.173,54.778,-14.790)
O5': (-4.114,55.066,-17.509)
O4': (-5.057,56.141,-15.054)
C5': (-3.503,56.192,-16.901)
P: (-4.284,54.980,-19.097)
C4': (-3.652,56.089,-15.397)
C2': (-3.945,54.774,-13.475)
O2': (-3.366,55.621,-12.506)
N1: (-6.279,54.287,-14.233)
O4: (-8.960,51.406,-14.991)
O2: (-7.101,54.349,-12.115)
C6: (-6.322,53.724,-15.491)
C5: (-7.187,52.756,-15.817)
O3': (-1.761,54.809,-14.584)
N3: (-8.014,52.891,-13.588)
OP1: (-3.035,55.414,-19.760)
OP2: (-4.853,53.648,-19.392)
C2: (-7.129,53.874,-13.233)
C1': (-5.292,55.348,-13.908)
C3': (-3.173,54.778,-14.790)
O5': (-4.114,55.066,-17.509)
O4': (-5.057,56.141,-15.054)
C5': (-3.503,56.192,-16.901)
P: (-4.284,54.980,-19.097)
C4': (-3.652,56.089,-15.397)
C2': (-3.945,54.774,-13.475)
O2': (-3.366,55.621,-12.506)
N1: (-6.279,54.287,-14.233)
O4: (-8.960,51.406,-14.991)
O2: (-7.101,54.349,-12.115)
C6: (-6.322,53.724,-15.491)
C5: (-7.187,52.756,-15.817)
O3': (-1.761,54.809,-14.584)
OP1: (-1.390,52.616,-13.411)
OP2: (0.529,53.872,-14.578)
C3': (-2.366,51.140,-18.019)
C1': (-3.626,50.098,-16.349)
C5': (-0.517,51.597,-16.287)
O4': (-2.279,49.969,-15.958)
C8: (-4.163,51.071,-14.091)
O2': (-4.810,51.347,-18.050)
C6: (-7.156,49.569,-13.036)
C5: (-5.970,50.078,-13.595)
C4: (-5.599,49.591,-14.834)
P: (-0.889,53.457,-14.518)
C4': (-1.423,50.582,-16.956)
C2': (-3.655,51.340,-17.231)
C2: (-7.354,48.266,-14.940)
N1: (-7.835,48.646,-13.749)
N3: (-6.253,48.677,-15.567)
N6: (-7.623,49.957,-11.845)
N7: (-5.055,51.010,-13.133)
N9: (-4.429,50.242,-15.144)
O5': (-1.263,52.734,-15.885)
O3': (-2.590,50.179,-19.035)
OP2: (0.529,53.872,-14.578)
C3': (-2.366,51.140,-18.019)
C1': (-3.626,50.098,-16.349)
C5': (-0.517,51.597,-16.287)
O4': (-2.279,49.969,-15.958)
C8: (-4.163,51.071,-14.091)
O2': (-4.810,51.347,-18.050)
C6: (-7.156,49.569,-13.036)
C5: (-5.970,50.078,-13.595)
C4: (-5.599,49.591,-14.834)
P: (-0.889,53.457,-14.518)
C4': (-1.423,50.582,-16.956)
C2': (-3.655,51.340,-17.231)
C2: (-7.354,48.266,-14.940)
N1: (-7.835,48.646,-13.749)
N3: (-6.253,48.677,-15.567)
N6: (-7.623,49.957,-11.845)
N7: (-5.055,51.010,-13.133)
N9: (-4.429,50.242,-15.144)
O5': (-1.263,52.734,-15.885)
O3': (-2.590,50.179,-19.035)
Image (generated by PyMOL):