Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2504:A2505
Extra
PDB:
ATOM 1 O3' G A2503 18.153 145.216 116.042 1.00 45.18 O
ATOM 2 P U A2504 17.157 145.946 117.055 1.00 44.94 P
ATOM 3 OP1 U A2504 15.915 145.147 117.019 1.00 43.49 O
ATOM 4 OP2 U A2504 17.137 147.386 116.702 1.00 42.96 O
ATOM 5 O5' U A2504 17.838 145.781 118.484 1.00 44.50 O
ATOM 6 C5' U A2504 17.649 144.583 119.247 1.00 46.19 C
ATOM 7 C4' U A2504 18.406 144.673 120.543 1.00 46.98 C
ATOM 8 O4' U A2504 19.767 145.088 120.262 1.00 45.57 O
ATOM 9 C3' U A2504 17.908 145.730 121.505 1.00 48.21 C
ATOM 10 O3' U A2504 16.789 145.209 122.226 1.00 52.95 O
ATOM 11 C2' U A2504 19.138 145.958 122.377 1.00 46.24 C
ATOM 12 O2' U A2504 19.309 144.906 123.303 1.00 47.59 O
ATOM 13 C1' U A2504 20.266 145.844 121.349 1.00 43.89 C
ATOM 14 N1 U A2504 20.784 147.121 120.836 1.00 41.57 N
ATOM 15 C2 U A2504 21.827 147.730 121.519 1.00 40.58 C
ATOM 16 O2 U A2504 22.351 147.248 122.513 1.00 41.93 O
ATOM 17 N3 U A2504 22.233 148.931 120.993 1.00 39.19 N
ATOM 18 C4 U A2504 21.713 149.586 119.893 1.00 39.58 C
ATOM 19 O4 U A2504 21.973 150.780 119.736 1.00 39.86 O
ATOM 20 C5 U A2504 20.674 148.879 119.225 1.00 41.03 C
ATOM 21 C6 U A2504 20.250 147.705 119.706 1.00 42.12 C
ATOM 22 P A A2505 15.562 146.174 122.593 1.00 57.07 P
ATOM 23 OP1 A A2505 16.164 147.251 123.413 1.00 55.30 O
ATOM 24 OP2 A A2505 14.423 145.382 123.141 1.00 56.65 O
ATOM 25 O5' A A2505 15.113 146.767 121.182 1.00 60.88 O
TER
ATOM 1 O3' U B2504 16.789 145.209 122.226 1.00 52.95 O
ATOM 2 P A B2505 15.562 146.174 122.593 1.00 57.07 P
ATOM 3 OP1 A B2505 16.164 147.251 123.413 1.00 55.30 O
ATOM 4 OP2 A B2505 14.423 145.382 123.141 1.00 56.65 O
ATOM 5 O5' A B2505 15.113 146.767 121.182 1.00 60.88 O
ATOM 6 C5' A B2505 13.852 147.455 121.013 1.00 67.44 C
ATOM 7 C4' A B2505 14.078 148.821 120.402 1.00 71.20 C
ATOM 8 O4' A B2505 14.865 149.623 121.315 1.00 73.55 O
ATOM 9 C3' A B2505 14.861 148.827 119.099 1.00 73.62 C
ATOM 10 O3' A B2505 13.922 148.689 118.012 1.00 71.59 O
ATOM 11 C2' A B2505 15.489 150.216 119.077 1.00 76.57 C
ATOM 12 O2' A B2505 14.631 151.144 118.435 1.00 78.96 O
ATOM 13 C1' A B2505 15.670 150.523 120.574 1.00 77.30 C
ATOM 14 N9 A B2505 17.028 150.541 121.150 1.00 79.46 N
ATOM 15 C8 A B2505 17.561 149.640 122.047 1.00 79.87 C
ATOM 16 N7 A B2505 18.771 149.946 122.455 1.00 79.64 N
ATOM 17 C5 A B2505 19.068 151.119 121.774 1.00 80.42 C
ATOM 18 C6 A B2505 20.210 151.961 121.780 1.00 80.91 C
ATOM 19 N6 A B2505 21.294 151.743 122.533 1.00 81.17 N
ATOM 20 N1 A B2505 20.193 153.046 120.975 1.00 80.58 N
ATOM 21 C2 A B2505 19.103 153.268 120.225 1.00 80.84 C
ATOM 22 N3 A B2505 17.970 152.561 120.139 1.00 80.53 N
ATOM 23 C4 A B2505 18.013 151.488 120.949 1.00 80.18 C
TER
ATOM 2 P U A2504 17.157 145.946 117.055 1.00 44.94 P
ATOM 3 OP1 U A2504 15.915 145.147 117.019 1.00 43.49 O
ATOM 4 OP2 U A2504 17.137 147.386 116.702 1.00 42.96 O
ATOM 5 O5' U A2504 17.838 145.781 118.484 1.00 44.50 O
ATOM 6 C5' U A2504 17.649 144.583 119.247 1.00 46.19 C
ATOM 7 C4' U A2504 18.406 144.673 120.543 1.00 46.98 C
ATOM 8 O4' U A2504 19.767 145.088 120.262 1.00 45.57 O
ATOM 9 C3' U A2504 17.908 145.730 121.505 1.00 48.21 C
ATOM 10 O3' U A2504 16.789 145.209 122.226 1.00 52.95 O
ATOM 11 C2' U A2504 19.138 145.958 122.377 1.00 46.24 C
ATOM 12 O2' U A2504 19.309 144.906 123.303 1.00 47.59 O
ATOM 13 C1' U A2504 20.266 145.844 121.349 1.00 43.89 C
ATOM 14 N1 U A2504 20.784 147.121 120.836 1.00 41.57 N
ATOM 15 C2 U A2504 21.827 147.730 121.519 1.00 40.58 C
ATOM 16 O2 U A2504 22.351 147.248 122.513 1.00 41.93 O
ATOM 17 N3 U A2504 22.233 148.931 120.993 1.00 39.19 N
ATOM 18 C4 U A2504 21.713 149.586 119.893 1.00 39.58 C
ATOM 19 O4 U A2504 21.973 150.780 119.736 1.00 39.86 O
ATOM 20 C5 U A2504 20.674 148.879 119.225 1.00 41.03 C
ATOM 21 C6 U A2504 20.250 147.705 119.706 1.00 42.12 C
ATOM 22 P A A2505 15.562 146.174 122.593 1.00 57.07 P
ATOM 23 OP1 A A2505 16.164 147.251 123.413 1.00 55.30 O
ATOM 24 OP2 A A2505 14.423 145.382 123.141 1.00 56.65 O
ATOM 25 O5' A A2505 15.113 146.767 121.182 1.00 60.88 O
TER
ATOM 1 O3' U B2504 16.789 145.209 122.226 1.00 52.95 O
ATOM 2 P A B2505 15.562 146.174 122.593 1.00 57.07 P
ATOM 3 OP1 A B2505 16.164 147.251 123.413 1.00 55.30 O
ATOM 4 OP2 A B2505 14.423 145.382 123.141 1.00 56.65 O
ATOM 5 O5' A B2505 15.113 146.767 121.182 1.00 60.88 O
ATOM 6 C5' A B2505 13.852 147.455 121.013 1.00 67.44 C
ATOM 7 C4' A B2505 14.078 148.821 120.402 1.00 71.20 C
ATOM 8 O4' A B2505 14.865 149.623 121.315 1.00 73.55 O
ATOM 9 C3' A B2505 14.861 148.827 119.099 1.00 73.62 C
ATOM 10 O3' A B2505 13.922 148.689 118.012 1.00 71.59 O
ATOM 11 C2' A B2505 15.489 150.216 119.077 1.00 76.57 C
ATOM 12 O2' A B2505 14.631 151.144 118.435 1.00 78.96 O
ATOM 13 C1' A B2505 15.670 150.523 120.574 1.00 77.30 C
ATOM 14 N9 A B2505 17.028 150.541 121.150 1.00 79.46 N
ATOM 15 C8 A B2505 17.561 149.640 122.047 1.00 79.87 C
ATOM 16 N7 A B2505 18.771 149.946 122.455 1.00 79.64 N
ATOM 17 C5 A B2505 19.068 151.119 121.774 1.00 80.42 C
ATOM 18 C6 A B2505 20.210 151.961 121.780 1.00 80.91 C
ATOM 19 N6 A B2505 21.294 151.743 122.533 1.00 81.17 N
ATOM 20 N1 A B2505 20.193 153.046 120.975 1.00 80.58 N
ATOM 21 C2 A B2505 19.103 153.268 120.225 1.00 80.84 C
ATOM 22 N3 A B2505 17.970 152.561 120.139 1.00 80.53 N
ATOM 23 C4 A B2505 18.013 151.488 120.949 1.00 80.18 C
TER
Atoms:
C4: (21.713,149.586,119.893)
N3: (22.233,148.931,120.993)
OP1: (15.915,145.147,117.019)
OP2: (17.137,147.386,116.702)
C2: (21.827,147.730,121.519)
C1': (20.266,145.844,121.349)
C3': (17.908,145.730,121.505)
O5': (17.838,145.781,118.484)
O4': (19.767,145.088,120.262)
C5': (17.649,144.583,119.247)
P: (17.157,145.946,117.055)
C4': (18.406,144.673,120.543)
C2': (19.138,145.958,122.377)
O2': (19.309,144.906,123.303)
N1: (20.784,147.121,120.836)
O4: (21.973,150.780,119.736)
O2: (22.351,147.248,122.513)
C6: (20.250,147.705,119.706)
C5: (20.674,148.879,119.225)
O3': (16.789,145.209,122.226)
N3: (22.233,148.931,120.993)
OP1: (15.915,145.147,117.019)
OP2: (17.137,147.386,116.702)
C2: (21.827,147.730,121.519)
C1': (20.266,145.844,121.349)
C3': (17.908,145.730,121.505)
O5': (17.838,145.781,118.484)
O4': (19.767,145.088,120.262)
C5': (17.649,144.583,119.247)
P: (17.157,145.946,117.055)
C4': (18.406,144.673,120.543)
C2': (19.138,145.958,122.377)
O2': (19.309,144.906,123.303)
N1: (20.784,147.121,120.836)
O4: (21.973,150.780,119.736)
O2: (22.351,147.248,122.513)
C6: (20.250,147.705,119.706)
C5: (20.674,148.879,119.225)
O3': (16.789,145.209,122.226)
OP1: (16.164,147.251,123.413)
OP2: (14.423,145.382,123.141)
C3': (14.861,148.827,119.099)
C1': (15.670,150.523,120.574)
C5': (13.852,147.455,121.013)
O4': (14.865,149.623,121.315)
C8: (17.561,149.640,122.047)
O2': (14.631,151.144,118.435)
C6: (20.210,151.961,121.780)
C5: (19.068,151.119,121.774)
C4: (18.013,151.488,120.949)
P: (15.562,146.174,122.593)
C4': (14.078,148.821,120.402)
C2': (15.489,150.216,119.077)
C2: (19.103,153.268,120.225)
N1: (20.193,153.046,120.975)
N3: (17.970,152.561,120.139)
N6: (21.294,151.743,122.533)
N7: (18.771,149.946,122.455)
N9: (17.028,150.541,121.150)
O5': (15.113,146.767,121.182)
O3': (13.922,148.689,118.012)
OP2: (14.423,145.382,123.141)
C3': (14.861,148.827,119.099)
C1': (15.670,150.523,120.574)
C5': (13.852,147.455,121.013)
O4': (14.865,149.623,121.315)
C8: (17.561,149.640,122.047)
O2': (14.631,151.144,118.435)
C6: (20.210,151.961,121.780)
C5: (19.068,151.119,121.774)
C4: (18.013,151.488,120.949)
P: (15.562,146.174,122.593)
C4': (14.078,148.821,120.402)
C2': (15.489,150.216,119.077)
C2: (19.103,153.268,120.225)
N1: (20.193,153.046,120.975)
N3: (17.970,152.561,120.139)
N6: (21.294,151.743,122.533)
N7: (18.771,149.946,122.455)
N9: (17.028,150.541,121.150)
O5': (15.113,146.767,121.182)
O3': (13.922,148.689,118.012)
Image (generated by PyMOL):