Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2871:A2828
Extra
PDB:
ATOM 1 O3' G A2870 -21.144 -80.827 -49.398 1.00 0.09 O
ATOM 2 P U A2871 -21.042 -82.257 -48.715 1.00 0.01 P
ATOM 3 OP1 U A2871 -20.600 -83.214 -49.744 1.00 0.01 O
ATOM 4 OP2 U A2871 -22.323 -82.498 -48.020 1.00 0.01 O
ATOM 5 O5' U A2871 -19.882 -82.036 -47.661 1.00 0.01 O
ATOM 6 C5' U A2871 -18.594 -81.617 -48.079 1.00 0.01 C
ATOM 7 C4' U A2871 -17.711 -81.331 -46.906 1.00 0.01 C
ATOM 8 O4' U A2871 -18.175 -80.139 -46.224 1.00 0.01 O
ATOM 9 C3' U A2871 -17.705 -82.384 -45.833 1.00 0.01 C
ATOM 10 O3' U A2871 -16.869 -83.458 -46.128 1.00 0.01 O
ATOM 11 C2' U A2871 -17.294 -81.611 -44.594 1.00 0.01 C
ATOM 12 O2' U A2871 -15.893 -81.440 -44.543 1.00 0.01 O
ATOM 13 C1' U A2871 -17.954 -80.259 -44.843 1.00 0.01 C
ATOM 14 N1 U A2871 -19.238 -80.162 -44.173 1.00 0.01 N
ATOM 15 C2 U A2871 -19.168 -79.828 -42.872 1.00 0.01 C
ATOM 16 O2 U A2871 -18.085 -79.633 -42.378 1.00 0.01 O
ATOM 17 N3 U A2871 -20.359 -79.757 -42.204 1.00 0.01 N
ATOM 18 C4 U A2871 -21.588 -79.994 -42.742 1.00 0.01 C
ATOM 19 O4 U A2871 -22.567 -79.890 -42.038 1.00 0.01 O
ATOM 20 C5 U A2871 -21.589 -80.351 -44.113 1.00 0.01 C
ATOM 21 C6 U A2871 -20.430 -80.422 -44.771 1.00 0.01 C
ATOM 22 P A A2872 -17.219 -84.879 -45.516 1.00 0.01 P
ATOM 23 OP1 A A2872 -16.279 -85.859 -46.098 1.00 0.01 O
ATOM 24 OP2 A A2872 -18.661 -85.089 -45.708 1.00 0.01 O
ATOM 25 O5' A A2872 -16.917 -84.698 -43.972 1.00 0.01 O
TER
ATOM 1 O3' G B2827 -26.502 -89.990 -42.210 1.00 0.01 O
ATOM 2 P A B2828 -26.604 -89.070 -43.498 1.00 0.01 P
ATOM 3 OP1 A B2828 -28.007 -89.149 -43.968 1.00 0.01 O
ATOM 4 OP2 A B2828 -25.499 -89.481 -44.415 1.00 0.01 O
ATOM 5 O5' A B2828 -26.317 -87.629 -42.899 1.00 0.01 O
ATOM 6 C5' A B2828 -27.229 -86.560 -43.100 1.00 0.01 C
ATOM 7 C4' A B2828 -27.050 -85.489 -42.062 1.00 0.01 C
ATOM 8 O4' A B2828 -25.643 -85.315 -41.800 1.00 0.01 O
ATOM 9 C3' A B2828 -27.600 -84.124 -42.428 1.00 0.01 C
ATOM 10 O3' A B2828 -28.302 -83.594 -41.321 1.00 0.01 O
ATOM 11 C2' A B2828 -26.360 -83.273 -42.707 1.00 0.01 C
ATOM 12 O2' A B2828 -26.505 -81.921 -42.337 1.00 0.01 O
ATOM 13 C1' A B2828 -25.289 -83.951 -41.873 1.00 0.01 C
ATOM 14 N9 A B2828 -23.940 -83.896 -42.442 1.00 0.01 N
ATOM 15 C8 A B2828 -23.570 -84.269 -43.693 1.00 0.01 C
ATOM 16 N7 A B2828 -22.277 -84.209 -43.912 1.00 0.01 N
ATOM 17 C5 A B2828 -21.763 -83.792 -42.725 1.00 0.01 C
ATOM 18 C6 A B2828 -20.458 -83.573 -42.343 1.00 0.01 C
ATOM 19 N6 A B2828 -19.407 -83.722 -43.154 1.00 0.01 N
ATOM 20 N1 A B2828 -20.269 -83.171 -41.086 1.00 0.01 N
ATOM 21 C2 A B2828 -21.324 -83.022 -40.303 1.00 0.01 C
ATOM 22 N3 A B2828 -22.602 -83.233 -40.553 1.00 0.01 N
ATOM 23 C4 A B2828 -22.756 -83.617 -41.808 1.00 0.01 C
ATOM 24 P U B2829 -29.792 -84.087 -41.006 1.00 0.01 P
ATOM 25 OP1 U B2829 -29.801 -85.545 -41.118 1.00 0.01 O
ATOM 26 OP2 U B2829 -30.710 -83.310 -41.874 1.00 0.01 O
ATOM 27 O5' U B2829 -29.971 -83.661 -39.490 1.00 0.00 O
TER
ATOM 2 P U A2871 -21.042 -82.257 -48.715 1.00 0.01 P
ATOM 3 OP1 U A2871 -20.600 -83.214 -49.744 1.00 0.01 O
ATOM 4 OP2 U A2871 -22.323 -82.498 -48.020 1.00 0.01 O
ATOM 5 O5' U A2871 -19.882 -82.036 -47.661 1.00 0.01 O
ATOM 6 C5' U A2871 -18.594 -81.617 -48.079 1.00 0.01 C
ATOM 7 C4' U A2871 -17.711 -81.331 -46.906 1.00 0.01 C
ATOM 8 O4' U A2871 -18.175 -80.139 -46.224 1.00 0.01 O
ATOM 9 C3' U A2871 -17.705 -82.384 -45.833 1.00 0.01 C
ATOM 10 O3' U A2871 -16.869 -83.458 -46.128 1.00 0.01 O
ATOM 11 C2' U A2871 -17.294 -81.611 -44.594 1.00 0.01 C
ATOM 12 O2' U A2871 -15.893 -81.440 -44.543 1.00 0.01 O
ATOM 13 C1' U A2871 -17.954 -80.259 -44.843 1.00 0.01 C
ATOM 14 N1 U A2871 -19.238 -80.162 -44.173 1.00 0.01 N
ATOM 15 C2 U A2871 -19.168 -79.828 -42.872 1.00 0.01 C
ATOM 16 O2 U A2871 -18.085 -79.633 -42.378 1.00 0.01 O
ATOM 17 N3 U A2871 -20.359 -79.757 -42.204 1.00 0.01 N
ATOM 18 C4 U A2871 -21.588 -79.994 -42.742 1.00 0.01 C
ATOM 19 O4 U A2871 -22.567 -79.890 -42.038 1.00 0.01 O
ATOM 20 C5 U A2871 -21.589 -80.351 -44.113 1.00 0.01 C
ATOM 21 C6 U A2871 -20.430 -80.422 -44.771 1.00 0.01 C
ATOM 22 P A A2872 -17.219 -84.879 -45.516 1.00 0.01 P
ATOM 23 OP1 A A2872 -16.279 -85.859 -46.098 1.00 0.01 O
ATOM 24 OP2 A A2872 -18.661 -85.089 -45.708 1.00 0.01 O
ATOM 25 O5' A A2872 -16.917 -84.698 -43.972 1.00 0.01 O
TER
ATOM 1 O3' G B2827 -26.502 -89.990 -42.210 1.00 0.01 O
ATOM 2 P A B2828 -26.604 -89.070 -43.498 1.00 0.01 P
ATOM 3 OP1 A B2828 -28.007 -89.149 -43.968 1.00 0.01 O
ATOM 4 OP2 A B2828 -25.499 -89.481 -44.415 1.00 0.01 O
ATOM 5 O5' A B2828 -26.317 -87.629 -42.899 1.00 0.01 O
ATOM 6 C5' A B2828 -27.229 -86.560 -43.100 1.00 0.01 C
ATOM 7 C4' A B2828 -27.050 -85.489 -42.062 1.00 0.01 C
ATOM 8 O4' A B2828 -25.643 -85.315 -41.800 1.00 0.01 O
ATOM 9 C3' A B2828 -27.600 -84.124 -42.428 1.00 0.01 C
ATOM 10 O3' A B2828 -28.302 -83.594 -41.321 1.00 0.01 O
ATOM 11 C2' A B2828 -26.360 -83.273 -42.707 1.00 0.01 C
ATOM 12 O2' A B2828 -26.505 -81.921 -42.337 1.00 0.01 O
ATOM 13 C1' A B2828 -25.289 -83.951 -41.873 1.00 0.01 C
ATOM 14 N9 A B2828 -23.940 -83.896 -42.442 1.00 0.01 N
ATOM 15 C8 A B2828 -23.570 -84.269 -43.693 1.00 0.01 C
ATOM 16 N7 A B2828 -22.277 -84.209 -43.912 1.00 0.01 N
ATOM 17 C5 A B2828 -21.763 -83.792 -42.725 1.00 0.01 C
ATOM 18 C6 A B2828 -20.458 -83.573 -42.343 1.00 0.01 C
ATOM 19 N6 A B2828 -19.407 -83.722 -43.154 1.00 0.01 N
ATOM 20 N1 A B2828 -20.269 -83.171 -41.086 1.00 0.01 N
ATOM 21 C2 A B2828 -21.324 -83.022 -40.303 1.00 0.01 C
ATOM 22 N3 A B2828 -22.602 -83.233 -40.553 1.00 0.01 N
ATOM 23 C4 A B2828 -22.756 -83.617 -41.808 1.00 0.01 C
ATOM 24 P U B2829 -29.792 -84.087 -41.006 1.00 0.01 P
ATOM 25 OP1 U B2829 -29.801 -85.545 -41.118 1.00 0.01 O
ATOM 26 OP2 U B2829 -30.710 -83.310 -41.874 1.00 0.01 O
ATOM 27 O5' U B2829 -29.971 -83.661 -39.490 1.00 0.00 O
TER
Atoms:
C4: (-21.588,-79.994,-42.742)
N3: (-20.359,-79.757,-42.204)
OP1: (-20.600,-83.214,-49.744)
OP2: (-22.323,-82.498,-48.020)
C2: (-19.168,-79.828,-42.872)
C1': (-17.954,-80.259,-44.843)
C3': (-17.705,-82.384,-45.833)
O5': (-19.882,-82.036,-47.661)
O4': (-18.175,-80.139,-46.224)
C5': (-18.594,-81.617,-48.079)
P: (-21.042,-82.257,-48.715)
C4': (-17.711,-81.331,-46.906)
C2': (-17.294,-81.611,-44.594)
O2': (-15.893,-81.440,-44.543)
N1: (-19.238,-80.162,-44.173)
O4: (-22.567,-79.890,-42.038)
O2: (-18.085,-79.633,-42.378)
C6: (-20.430,-80.422,-44.771)
C5: (-21.589,-80.351,-44.113)
O3': (-16.869,-83.458,-46.128)
N3: (-20.359,-79.757,-42.204)
OP1: (-20.600,-83.214,-49.744)
OP2: (-22.323,-82.498,-48.020)
C2: (-19.168,-79.828,-42.872)
C1': (-17.954,-80.259,-44.843)
C3': (-17.705,-82.384,-45.833)
O5': (-19.882,-82.036,-47.661)
O4': (-18.175,-80.139,-46.224)
C5': (-18.594,-81.617,-48.079)
P: (-21.042,-82.257,-48.715)
C4': (-17.711,-81.331,-46.906)
C2': (-17.294,-81.611,-44.594)
O2': (-15.893,-81.440,-44.543)
N1: (-19.238,-80.162,-44.173)
O4: (-22.567,-79.890,-42.038)
O2: (-18.085,-79.633,-42.378)
C6: (-20.430,-80.422,-44.771)
C5: (-21.589,-80.351,-44.113)
O3': (-16.869,-83.458,-46.128)
OP1: (-28.007,-89.149,-43.968)
OP2: (-25.499,-89.481,-44.415)
C3': (-27.600,-84.124,-42.428)
C1': (-25.289,-83.951,-41.873)
C5': (-27.229,-86.560,-43.100)
O4': (-25.643,-85.315,-41.800)
C8: (-23.570,-84.269,-43.693)
O2': (-26.505,-81.921,-42.337)
C6: (-20.458,-83.573,-42.343)
C5: (-21.763,-83.792,-42.725)
C4: (-22.756,-83.617,-41.808)
P: (-26.604,-89.070,-43.498)
C4': (-27.050,-85.489,-42.062)
C2': (-26.360,-83.273,-42.707)
C2: (-21.324,-83.022,-40.303)
N1: (-20.269,-83.171,-41.086)
N3: (-22.602,-83.233,-40.553)
N6: (-19.407,-83.722,-43.154)
N7: (-22.277,-84.209,-43.912)
N9: (-23.940,-83.896,-42.442)
O5': (-26.317,-87.629,-42.899)
O3': (-28.302,-83.594,-41.321)
OP2: (-25.499,-89.481,-44.415)
C3': (-27.600,-84.124,-42.428)
C1': (-25.289,-83.951,-41.873)
C5': (-27.229,-86.560,-43.100)
O4': (-25.643,-85.315,-41.800)
C8: (-23.570,-84.269,-43.693)
O2': (-26.505,-81.921,-42.337)
C6: (-20.458,-83.573,-42.343)
C5: (-21.763,-83.792,-42.725)
C4: (-22.756,-83.617,-41.808)
P: (-26.604,-89.070,-43.498)
C4': (-27.050,-85.489,-42.062)
C2': (-26.360,-83.273,-42.707)
C2: (-21.324,-83.022,-40.303)
N1: (-20.269,-83.171,-41.086)
N3: (-22.602,-83.233,-40.553)
N6: (-19.407,-83.722,-43.154)
N7: (-22.277,-84.209,-43.912)
N9: (-23.940,-83.896,-42.442)
O5': (-26.317,-87.629,-42.899)
O3': (-28.302,-83.594,-41.321)
Image (generated by PyMOL):