Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW4:A6:A7
Extra
PDB:
ATOM 1 O3' C A 5 3.019 5.155 6.316 1.00 7.99 O
ATOM 2 P U A 6 4.161 4.096 5.942 1.00 8.48 P
ATOM 3 OP1 U A 6 3.769 2.824 6.596 1.00 10.35 O
ATOM 4 OP2 U A 6 5.483 4.693 6.224 1.00 9.31 O
ATOM 5 O5' U A 6 4.054 3.940 4.354 1.00 8.13 O
ATOM 6 C5' U A 6 2.912 3.353 3.748 1.00 8.24 C
ATOM 7 C4' U A 6 2.994 3.520 2.243 1.00 7.75 C
ATOM 8 O4' U A 6 2.952 4.929 1.914 1.00 7.80 O
ATOM 9 C3' U A 6 4.299 3.042 1.632 1.00 7.77 C
ATOM 10 O3' U A 6 4.234 1.638 1.429 1.00 8.49 O
ATOM 11 C2' U A 6 4.321 3.829 0.326 1.00 7.74 C
ATOM 12 O2' U A 6 3.467 3.274 -0.650 1.00 8.52 O
ATOM 13 C1' U A 6 3.756 5.173 0.777 1.00 7.63 C
ATOM 14 N1 U A 6 4.811 6.163 1.124 1.00 7.62 N
ATOM 15 C2 U A 6 5.207 7.046 0.146 1.00 8.09 C
ATOM 16 O2 U A 6 4.726 7.043 -0.971 1.00 9.01 O
ATOM 17 N3 U A 6 6.182 7.934 0.521 1.00 8.63 N
ATOM 18 C4 U A 6 6.798 8.016 1.756 1.00 8.50 C
ATOM 19 O4 U A 6 7.664 8.865 1.945 1.00 9.69 O
ATOM 20 C5 U A 6 6.339 7.053 2.726 1.00 8.40 C
ATOM 21 C6 U A 6 5.382 6.179 2.382 1.00 7.73 C
ATOM 22 P A A 7 5.578 0.775 1.330 1.00 9.19 P
ATOM 23 OP1 A A 7 6.442 1.349 0.276 1.00 9.54 O
ATOM 24 OP2 A A 7 5.157 -0.647 1.267 1.00 9.97 O
ATOM 25 O5' A A 7 6.257 1.062 2.748 1.00 8.80 O
TER
ATOM 1 O3' U B 6 4.234 1.638 1.429 1.00 8.49 O
ATOM 2 P A B 7 5.578 0.775 1.330 1.00 9.19 P
ATOM 3 OP1 A B 7 6.442 1.349 0.276 1.00 9.54 O
ATOM 4 OP2 A B 7 5.157 -0.647 1.267 1.00 9.97 O
ATOM 5 O5' A B 7 6.257 1.062 2.748 1.00 8.80 O
ATOM 6 C5' A B 7 7.404 0.323 3.162 1.00 9.48 C
ATOM 7 C4' A B 7 8.454 1.238 3.770 1.00 9.25 C
ATOM 8 O4' A B 7 9.026 2.078 2.732 1.00 8.99 O
ATOM 9 C3' A B 7 7.966 2.189 4.861 1.00 10.07 C
ATOM 10 O3' A B 7 8.974 2.379 5.842 1.00 11.70 O
ATOM 11 C2' A B 7 7.761 3.480 4.084 1.00 9.08 C
ATOM 12 O2' A B 7 7.815 4.632 4.906 1.00 9.98 O
ATOM 13 C1' A B 7 8.971 3.418 3.158 1.00 9.03 C
ATOM 14 N9 A B 7 8.843 4.264 1.979 1.00 8.38 N
ATOM 15 C8 A B 7 8.044 4.037 0.893 1.00 8.38 C
ATOM 16 N7 A B 7 8.119 4.974 -0.022 1.00 8.39 N
ATOM 17 C5 A B 7 9.028 5.875 0.503 1.00 8.29 C
ATOM 18 C6 A B 7 9.538 7.089 0.012 1.00 8.65 C
ATOM 19 N6 A B 7 9.173 7.608 -1.164 1.00 9.31 N
ATOM 20 N1 A B 7 10.432 7.747 0.781 1.00 9.12 N
ATOM 21 C2 A B 7 10.784 7.218 1.957 1.00 9.34 C
ATOM 22 N3 A B 7 10.371 6.085 2.524 1.00 8.95 N
ATOM 23 C4 A B 7 9.487 5.454 1.736 1.00 8.25 C
ATOM 24 P G B 8 9.105 1.442 7.128 1.00 11.53 P
ATOM 25 OP1 G B 8 8.838 0.041 6.734 1.00 14.68 O
ATOM 26 OP2 G B 8 8.375 2.060 8.251 1.00 13.85 O
ATOM 27 O5' G B 8 10.652 1.646 7.501 1.00 13.60 O
TER
ATOM 2 P U A 6 4.161 4.096 5.942 1.00 8.48 P
ATOM 3 OP1 U A 6 3.769 2.824 6.596 1.00 10.35 O
ATOM 4 OP2 U A 6 5.483 4.693 6.224 1.00 9.31 O
ATOM 5 O5' U A 6 4.054 3.940 4.354 1.00 8.13 O
ATOM 6 C5' U A 6 2.912 3.353 3.748 1.00 8.24 C
ATOM 7 C4' U A 6 2.994 3.520 2.243 1.00 7.75 C
ATOM 8 O4' U A 6 2.952 4.929 1.914 1.00 7.80 O
ATOM 9 C3' U A 6 4.299 3.042 1.632 1.00 7.77 C
ATOM 10 O3' U A 6 4.234 1.638 1.429 1.00 8.49 O
ATOM 11 C2' U A 6 4.321 3.829 0.326 1.00 7.74 C
ATOM 12 O2' U A 6 3.467 3.274 -0.650 1.00 8.52 O
ATOM 13 C1' U A 6 3.756 5.173 0.777 1.00 7.63 C
ATOM 14 N1 U A 6 4.811 6.163 1.124 1.00 7.62 N
ATOM 15 C2 U A 6 5.207 7.046 0.146 1.00 8.09 C
ATOM 16 O2 U A 6 4.726 7.043 -0.971 1.00 9.01 O
ATOM 17 N3 U A 6 6.182 7.934 0.521 1.00 8.63 N
ATOM 18 C4 U A 6 6.798 8.016 1.756 1.00 8.50 C
ATOM 19 O4 U A 6 7.664 8.865 1.945 1.00 9.69 O
ATOM 20 C5 U A 6 6.339 7.053 2.726 1.00 8.40 C
ATOM 21 C6 U A 6 5.382 6.179 2.382 1.00 7.73 C
ATOM 22 P A A 7 5.578 0.775 1.330 1.00 9.19 P
ATOM 23 OP1 A A 7 6.442 1.349 0.276 1.00 9.54 O
ATOM 24 OP2 A A 7 5.157 -0.647 1.267 1.00 9.97 O
ATOM 25 O5' A A 7 6.257 1.062 2.748 1.00 8.80 O
TER
ATOM 1 O3' U B 6 4.234 1.638 1.429 1.00 8.49 O
ATOM 2 P A B 7 5.578 0.775 1.330 1.00 9.19 P
ATOM 3 OP1 A B 7 6.442 1.349 0.276 1.00 9.54 O
ATOM 4 OP2 A B 7 5.157 -0.647 1.267 1.00 9.97 O
ATOM 5 O5' A B 7 6.257 1.062 2.748 1.00 8.80 O
ATOM 6 C5' A B 7 7.404 0.323 3.162 1.00 9.48 C
ATOM 7 C4' A B 7 8.454 1.238 3.770 1.00 9.25 C
ATOM 8 O4' A B 7 9.026 2.078 2.732 1.00 8.99 O
ATOM 9 C3' A B 7 7.966 2.189 4.861 1.00 10.07 C
ATOM 10 O3' A B 7 8.974 2.379 5.842 1.00 11.70 O
ATOM 11 C2' A B 7 7.761 3.480 4.084 1.00 9.08 C
ATOM 12 O2' A B 7 7.815 4.632 4.906 1.00 9.98 O
ATOM 13 C1' A B 7 8.971 3.418 3.158 1.00 9.03 C
ATOM 14 N9 A B 7 8.843 4.264 1.979 1.00 8.38 N
ATOM 15 C8 A B 7 8.044 4.037 0.893 1.00 8.38 C
ATOM 16 N7 A B 7 8.119 4.974 -0.022 1.00 8.39 N
ATOM 17 C5 A B 7 9.028 5.875 0.503 1.00 8.29 C
ATOM 18 C6 A B 7 9.538 7.089 0.012 1.00 8.65 C
ATOM 19 N6 A B 7 9.173 7.608 -1.164 1.00 9.31 N
ATOM 20 N1 A B 7 10.432 7.747 0.781 1.00 9.12 N
ATOM 21 C2 A B 7 10.784 7.218 1.957 1.00 9.34 C
ATOM 22 N3 A B 7 10.371 6.085 2.524 1.00 8.95 N
ATOM 23 C4 A B 7 9.487 5.454 1.736 1.00 8.25 C
ATOM 24 P G B 8 9.105 1.442 7.128 1.00 11.53 P
ATOM 25 OP1 G B 8 8.838 0.041 6.734 1.00 14.68 O
ATOM 26 OP2 G B 8 8.375 2.060 8.251 1.00 13.85 O
ATOM 27 O5' G B 8 10.652 1.646 7.501 1.00 13.60 O
TER
Atoms:
C4: (6.798,8.016,1.756)
N3: (6.182,7.934,0.521)
OP1: (3.769,2.824,6.596)
OP2: (5.483,4.693,6.224)
C2: (5.207,7.046,0.146)
C1': (3.756,5.173,0.777)
C3': (4.299,3.042,1.632)
O5': (4.054,3.940,4.354)
O4': (2.952,4.929,1.914)
C5': (2.912,3.353,3.748)
P: (4.161,4.096,5.942)
C4': (2.994,3.520,2.243)
C2': (4.321,3.829,0.326)
O2': (3.467,3.274,-0.650)
N1: (4.811,6.163,1.124)
O4: (7.664,8.865,1.945)
O2: (4.726,7.043,-0.971)
C6: (5.382,6.179,2.382)
C5: (6.339,7.053,2.726)
O3': (4.234,1.638,1.429)
N3: (6.182,7.934,0.521)
OP1: (3.769,2.824,6.596)
OP2: (5.483,4.693,6.224)
C2: (5.207,7.046,0.146)
C1': (3.756,5.173,0.777)
C3': (4.299,3.042,1.632)
O5': (4.054,3.940,4.354)
O4': (2.952,4.929,1.914)
C5': (2.912,3.353,3.748)
P: (4.161,4.096,5.942)
C4': (2.994,3.520,2.243)
C2': (4.321,3.829,0.326)
O2': (3.467,3.274,-0.650)
N1: (4.811,6.163,1.124)
O4: (7.664,8.865,1.945)
O2: (4.726,7.043,-0.971)
C6: (5.382,6.179,2.382)
C5: (6.339,7.053,2.726)
O3': (4.234,1.638,1.429)
OP1: (6.442,1.349,0.276)
OP2: (5.157,-0.647,1.267)
C3': (7.966,2.189,4.861)
C1': (8.971,3.418,3.158)
C5': (7.404,0.323,3.162)
O4': (9.026,2.078,2.732)
C8: (8.044,4.037,0.893)
O2': (7.815,4.632,4.906)
C6: (9.538,7.089,0.012)
C5: (9.028,5.875,0.503)
C4: (9.487,5.454,1.736)
P: (5.578,0.775,1.330)
C4': (8.454,1.238,3.770)
C2': (7.761,3.480,4.084)
C2: (10.784,7.218,1.957)
N1: (10.432,7.747,0.781)
N3: (10.371,6.085,2.524)
N6: (9.173,7.608,-1.164)
N7: (8.119,4.974,-0.022)
N9: (8.843,4.264,1.979)
O5': (6.257,1.062,2.748)
O3': (8.974,2.379,5.842)
OP2: (5.157,-0.647,1.267)
C3': (7.966,2.189,4.861)
C1': (8.971,3.418,3.158)
C5': (7.404,0.323,3.162)
O4': (9.026,2.078,2.732)
C8: (8.044,4.037,0.893)
O2': (7.815,4.632,4.906)
C6: (9.538,7.089,0.012)
C5: (9.028,5.875,0.503)
C4: (9.487,5.454,1.736)
P: (5.578,0.775,1.330)
C4': (8.454,1.238,3.770)
C2': (7.761,3.480,4.084)
C2: (10.784,7.218,1.957)
N1: (10.432,7.747,0.781)
N3: (10.371,6.085,2.524)
N6: (9.173,7.608,-1.164)
N7: (8.119,4.974,-0.022)
N9: (8.843,4.264,1.979)
O5': (6.257,1.062,2.748)
O3': (8.974,2.379,5.842)
Image (generated by PyMOL):