ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A106:A278

Extra

PDB:
ATOM 1 O3' G A 105 -57.593 0.957 -48.340 1.00 10.71 O
ATOM 2 P U A 106 -57.151 2.085 -47.286 1.00 23.33 P
ATOM 3 OP1 U A 106 -56.378 1.421 -46.204 1.00 34.07 O
ATOM 4 OP2 U A 106 -58.368 2.872 -46.946 1.00 34.77 O
ATOM 5 O5' U A 106 -56.147 3.011 -48.103 1.00 18.05 O
ATOM 6 C5' U A 106 -54.822 2.558 -48.412 1.00 16.80 C
ATOM 7 C4' U A 106 -54.030 3.665 -49.052 1.00 15.54 C
ATOM 8 O4' U A 106 -54.633 4.009 -50.325 1.00 15.07 O
ATOM 9 C3' U A 106 -54.007 4.974 -48.288 1.00 15.53 C
ATOM 10 O3' U A 106 -53.040 4.979 -47.254 1.00 14.73 O
ATOM 11 C2' U A 106 -53.729 5.994 -49.383 1.00 16.72 C
ATOM 12 O2' U A 106 -52.362 6.108 -49.750 1.00 19.22 O
ATOM 13 C1' U A 106 -54.514 5.402 -50.550 1.00 15.81 C
ATOM 14 N1 U A 106 -55.864 5.976 -50.631 1.00 26.80 N
ATOM 15 C2 U A 106 -56.014 7.150 -51.341 1.00 27.55 C
ATOM 16 O2 U A 106 -55.084 7.700 -51.908 1.00 30.59 O
ATOM 17 N3 U A 106 -57.289 7.659 -51.365 1.00 26.89 N
ATOM 18 C4 U A 106 -58.402 7.121 -50.769 1.00 27.10 C
ATOM 19 O4 U A 106 -59.491 7.680 -50.904 1.00 27.52 O
ATOM 20 C5 U A 106 -58.164 5.902 -50.059 1.00 26.94 C
ATOM 21 C6 U A 106 -56.936 5.385 -50.017 1.00 25.87 C
ATOM 22 P A A 107 -53.398 5.674 -45.854 1.00 53.49 P
ATOM 23 OP1 A A 107 -52.243 5.485 -44.951 1.00 43.57 O
ATOM 24 OP2 A A 107 -54.744 5.200 -45.427 1.00 42.38 O
ATOM 25 O5' A A 107 -53.484 7.221 -46.219 1.00 23.43 O
TER

ATOM 1 O3' U B 277 -66.106 7.376 -45.344 1.00 39.69 O
ATOM 2 P A B 278 -65.843 6.849 -46.830 1.00 33.93 P
ATOM 3 OP1 A B 278 -67.120 7.098 -47.561 1.00 37.70 O
ATOM 4 OP2 A B 278 -65.261 5.492 -46.799 1.00 36.96 O
ATOM 5 O5' A B 278 -64.728 7.826 -47.392 1.00 24.18 O
ATOM 6 C5' A B 278 -65.077 9.169 -47.735 1.00 22.47 C
ATOM 7 C4' A B 278 -63.943 9.851 -48.447 1.00 22.21 C
ATOM 8 O4' A B 278 -62.820 9.993 -47.546 1.00 21.92 O
ATOM 9 C3' A B 278 -63.357 9.146 -49.657 1.00 21.61 C
ATOM 10 O3' A B 278 -64.135 9.319 -50.842 1.00 22.37 O
ATOM 11 C2' A B 278 -61.988 9.798 -49.767 1.00 20.15 C
ATOM 12 O2' A B 278 -62.083 11.046 -50.416 1.00 21.41 O
ATOM 13 C1' A B 278 -61.626 10.024 -48.298 1.00 20.81 C
ATOM 14 N9 A B 278 -60.712 9.006 -47.789 1.00 39.34 N
ATOM 15 C8 A B 278 -60.989 7.757 -47.283 1.00 40.82 C
ATOM 16 N7 A B 278 -59.917 7.067 -46.967 1.00 41.94 N
ATOM 17 C5 A B 278 -58.867 7.921 -47.277 1.00 40.83 C
ATOM 18 C6 A B 278 -57.478 7.779 -47.183 1.00 42.21 C
ATOM 19 N6 A B 278 -56.875 6.671 -46.754 1.00 42.69 N
ATOM 20 N1 A B 278 -56.715 8.826 -47.556 1.00 42.09 N
ATOM 21 C2 A B 278 -57.320 9.933 -48.002 1.00 39.89 C
ATOM 22 N3 A B 278 -58.617 10.185 -48.148 1.00 38.13 N
ATOM 23 C4 A B 278 -59.344 9.125 -47.765 1.00 39.76 C
ATOM 24 P G B 279 -64.141 8.154 -51.957 1.00 46.63 P
ATOM 25 OP1 G B 279 -65.211 8.492 -52.932 1.00 42.56 O
ATOM 26 OP2 G B 279 -64.143 6.808 -51.287 1.00 43.98 O
ATOM 27 O5' G B 279 -62.734 8.327 -52.675 1.00 10.68 O
TER

Atoms:
C4: (-58.402,7.121,-50.769)
N3: (-57.289,7.659,-51.365)
OP1: (-56.378,1.421,-46.204)
OP2: (-58.368,2.872,-46.946)
C2: (-56.014,7.150,-51.341)
C1': (-54.514,5.402,-50.550)
C3': (-54.007,4.974,-48.288)
O5': (-56.147,3.011,-48.103)
O4': (-54.633,4.009,-50.325)
C5': (-54.822,2.558,-48.412)
P: (-57.151,2.085,-47.286)
C4': (-54.030,3.665,-49.052)
C2': (-53.729,5.994,-49.383)
O2': (-52.362,6.108,-49.750)
N1: (-55.864,5.976,-50.631)
O4: (-59.491,7.680,-50.904)
O2: (-55.084,7.700,-51.908)
C6: (-56.936,5.385,-50.017)
C5: (-58.164,5.902,-50.059)
O3': (-53.040,4.979,-47.254)
OP1: (-67.120,7.098,-47.561)
OP2: (-65.261,5.492,-46.799)
C3': (-63.357,9.146,-49.657)
C1': (-61.626,10.024,-48.298)
C5': (-65.077,9.169,-47.735)
O4': (-62.820,9.993,-47.546)
C8: (-60.989,7.757,-47.283)
O2': (-62.083,11.046,-50.416)
C6: (-57.478,7.779,-47.183)
C5: (-58.867,7.921,-47.277)
C4: (-59.344,9.125,-47.765)
P: (-65.843,6.849,-46.830)
C4': (-63.943,9.851,-48.447)
C2': (-61.988,9.798,-49.767)
C2: (-57.320,9.933,-48.002)
N1: (-56.715,8.826,-47.556)
N3: (-58.617,10.185,-48.148)
N6: (-56.875,6.671,-46.754)
N7: (-59.917,7.067,-46.967)
N9: (-60.712,9.006,-47.789)
O5': (-64.728,7.826,-47.392)
O3': (-64.135,9.319,-50.842)
Image (generated by PyMOL):
PyMOL image
show in jmol