ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A539:A537

Extra

PDB:
ATOM 1 O3' U A 538 -76.171 37.819 -36.779 1.00 42.49 O
ATOM 2 P U A 539 -76.396 37.180 -35.309 1.00 69.25 P
ATOM 3 OP1 U A 539 -77.864 37.003 -35.122 1.00 47.81 O
ATOM 4 OP2 U A 539 -75.609 37.899 -34.272 1.00 46.95 O
ATOM 5 O5' U A 539 -75.794 35.714 -35.442 1.00 21.12 O
ATOM 6 C5' U A 539 -74.829 35.238 -34.497 1.00 18.49 C
ATOM 7 C4' U A 539 -74.785 33.728 -34.488 1.00 17.00 C
ATOM 8 O4' U A 539 -76.103 33.191 -34.180 1.00 16.22 O
ATOM 9 C3' U A 539 -74.296 33.001 -35.744 1.00 16.46 C
ATOM 10 O3' U A 539 -73.364 31.990 -35.371 1.00 15.12 O
ATOM 11 C2' U A 539 -75.558 32.336 -36.279 1.00 16.66 C
ATOM 12 O2' U A 539 -75.290 31.099 -36.907 1.00 17.78 O
ATOM 13 C1' U A 539 -76.339 32.074 -34.999 1.00 16.76 C
ATOM 14 N1 U A 539 -77.779 31.914 -35.233 1.00 56.92 N
ATOM 15 C2 U A 539 -78.259 30.621 -35.339 1.00 59.49 C
ATOM 16 O2 U A 539 -77.554 29.626 -35.187 1.00 63.10 O
ATOM 17 N3 U A 539 -79.597 30.528 -35.626 1.00 58.73 N
ATOM 18 C4 U A 539 -80.484 31.567 -35.802 1.00 60.50 C
ATOM 19 O4 U A 539 -81.640 31.325 -36.150 1.00 64.72 O
ATOM 20 C5 U A 539 -79.916 32.864 -35.640 1.00 59.05 C
ATOM 21 C6 U A 539 -78.616 32.991 -35.368 1.00 57.64 C
ATOM 22 P C A 540 -72.410 31.326 -36.480 1.00 15.90 P
ATOM 23 OP1 C A 540 -72.955 31.568 -37.838 1.00 14.05 O
ATOM 24 OP2 C A 540 -72.186 29.946 -36.017 1.00 10.81 O
ATOM 25 O5' C A 540 -71.031 32.100 -36.356 1.00 27.53 O
TER

ATOM 1 O3' G B 536 -78.941 37.879 -42.743 1.00 3.14 O
ATOM 2 P A B 537 -79.243 38.082 -41.188 1.00 49.07 P
ATOM 3 OP1 A B 537 -80.720 38.125 -41.026 1.00 16.47 O
ATOM 4 OP2 A B 537 -78.416 39.227 -40.717 1.00 16.47 O
ATOM 5 O5' A B 537 -78.703 36.746 -40.513 1.00 30.54 O
ATOM 6 C5' A B 537 -77.872 36.805 -39.338 1.00 30.80 C
ATOM 7 C4' A B 537 -76.920 35.627 -39.288 1.00 31.14 C
ATOM 8 O4' A B 537 -77.625 34.448 -38.826 1.00 31.86 O
ATOM 9 C3' A B 537 -76.204 35.235 -40.583 1.00 32.55 C
ATOM 10 O3' A B 537 -74.869 34.848 -40.314 1.00 33.63 O
ATOM 11 C2' A B 537 -76.922 33.962 -41.002 1.00 32.02 C
ATOM 12 O2' A B 537 -76.056 33.088 -41.687 1.00 33.51 O
ATOM 13 C1' A B 537 -77.278 33.362 -39.647 1.00 32.70 C
ATOM 14 N9 A B 537 -78.382 32.414 -39.670 1.00 35.48 N
ATOM 15 C8 A B 537 -78.338 31.117 -39.245 1.00 35.02 C
ATOM 16 N7 A B 537 -79.466 30.473 -39.401 1.00 34.24 N
ATOM 17 C5 A B 537 -80.309 31.414 -39.960 1.00 34.80 C
ATOM 18 C6 A B 537 -81.631 31.347 -40.368 1.00 36.84 C
ATOM 19 N6 A B 537 -82.369 30.246 -40.279 1.00 37.80 N
ATOM 20 N1 A B 537 -82.186 32.457 -40.885 1.00 35.02 N
ATOM 21 C2 A B 537 -81.435 33.555 -40.983 1.00 36.73 C
ATOM 22 N3 A B 537 -80.169 33.742 -40.634 1.00 36.76 N
ATOM 23 C4 A B 537 -79.658 32.617 -40.123 1.00 34.82 C
ATOM 24 P U B 538 -73.671 35.834 -40.688 1.00 19.35 P
ATOM 25 OP1 U B 538 -74.128 36.663 -41.836 1.00 58.08 O
ATOM 26 OP2 U B 538 -72.439 35.019 -40.823 1.00 60.26 O
ATOM 27 O5' U B 538 -73.557 36.749 -39.384 1.00 36.46 O
TER

Atoms:
C4: (-80.484,31.567,-35.802)
N3: (-79.597,30.528,-35.626)
OP1: (-77.864,37.003,-35.122)
OP2: (-75.609,37.899,-34.272)
C2: (-78.259,30.621,-35.339)
C1': (-76.339,32.074,-34.999)
C3': (-74.296,33.001,-35.744)
O5': (-75.794,35.714,-35.442)
O4': (-76.103,33.191,-34.180)
C5': (-74.829,35.238,-34.497)
P: (-76.396,37.180,-35.309)
C4': (-74.785,33.728,-34.488)
C2': (-75.558,32.336,-36.279)
O2': (-75.290,31.099,-36.907)
N1: (-77.779,31.914,-35.233)
O4: (-81.640,31.325,-36.150)
O2: (-77.554,29.626,-35.187)
C6: (-78.616,32.991,-35.368)
C5: (-79.916,32.864,-35.640)
O3': (-73.364,31.990,-35.371)
OP1: (-80.720,38.125,-41.026)
OP2: (-78.416,39.227,-40.717)
C3': (-76.204,35.235,-40.583)
C1': (-77.278,33.362,-39.647)
C5': (-77.872,36.805,-39.338)
O4': (-77.625,34.448,-38.826)
C8: (-78.338,31.117,-39.245)
O2': (-76.056,33.088,-41.687)
C6: (-81.631,31.347,-40.368)
C5: (-80.309,31.414,-39.960)
C4: (-79.658,32.617,-40.123)
P: (-79.243,38.082,-41.188)
C4': (-76.920,35.627,-39.288)
C2': (-76.922,33.962,-41.002)
C2: (-81.435,33.555,-40.983)
N1: (-82.186,32.457,-40.885)
N3: (-80.169,33.742,-40.634)
N6: (-82.369,30.246,-40.279)
N7: (-79.466,30.473,-39.401)
N9: (-78.382,32.414,-39.670)
O5': (-78.703,36.746,-40.513)
O3': (-74.869,34.848,-40.314)
Image (generated by PyMOL):
PyMOL image
show in jmol