ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:9111:964

Extra

PDB:
ATOM 1 O3' U A 110 45.139 35.462 117.393 1.00 65.34 O
ATOM 2 P U A 111 46.129 34.224 117.169 1.00 65.35 P
ATOM 3 OP1 U A 111 45.432 33.236 116.294 1.00 62.67 O
ATOM 4 OP2 U A 111 46.659 33.803 118.493 1.00 65.06 O
ATOM 5 O5' U A 111 47.337 34.849 116.345 1.00 65.45 O
ATOM 6 C5' U A 111 47.145 35.338 115.005 1.00 62.23 C
ATOM 7 C4' U A 111 48.425 35.938 114.490 1.00 59.46 C
ATOM 8 O4' U A 111 48.760 37.117 115.259 1.00 59.22 O
ATOM 9 C3' U A 111 49.650 35.070 114.691 1.00 58.17 C
ATOM 10 O3' U A 111 49.708 34.062 113.696 1.00 57.02 O
ATOM 11 C2' U A 111 50.782 36.080 114.550 1.00 57.61 C
ATOM 12 O2' U A 111 51.073 36.348 113.198 1.00 56.91 O
ATOM 13 C1' U A 111 50.157 37.333 115.176 1.00 58.32 C
ATOM 14 N1 U A 111 50.670 37.700 116.505 1.00 59.15 N
ATOM 15 C2 U A 111 51.440 38.849 116.605 1.00 60.07 C
ATOM 16 O2 U A 111 51.671 39.581 115.662 1.00 62.16 O
ATOM 17 N3 U A 111 51.930 39.113 117.856 1.00 60.17 N
ATOM 18 C4 U A 111 51.730 38.374 118.997 1.00 60.21 C
ATOM 19 O4 U A 111 52.320 38.694 120.032 1.00 60.86 O
ATOM 20 C5 U A 111 50.898 37.223 118.824 1.00 59.65 C
ATOM 21 C6 U A 111 50.411 36.931 117.615 1.00 58.73 C
ATOM 22 P C A 112 50.126 32.571 114.102 1.00 56.53 P
ATOM 23 OP1 C A 112 50.029 31.754 112.870 1.00 56.67 O
ATOM 24 OP2 C A 112 49.348 32.183 115.305 1.00 58.36 O
ATOM 25 O5' C A 112 51.658 32.687 114.515 1.00 53.97 O
TER

ATOM 1 O3' C B 63 53.206 30.175 125.002 1.00 63.66 O
ATOM 2 P A B 64 52.426 31.571 124.834 1.00 66.67 P
ATOM 3 OP1 A B 64 52.003 32.025 126.188 1.00 65.91 O
ATOM 4 OP2 A B 64 51.408 31.414 123.760 1.00 65.19 O
ATOM 5 O5' A B 64 53.543 32.578 124.310 1.00 67.92 O
ATOM 6 C5' A B 64 54.815 32.710 124.980 1.00 70.61 C
ATOM 7 C4' A B 64 55.482 33.999 124.560 1.00 72.01 C
ATOM 8 O4' A B 64 55.621 34.001 123.120 1.00 72.37 O
ATOM 9 C3' A B 64 54.696 35.253 124.912 1.00 72.06 C
ATOM 10 O3' A B 64 55.060 35.593 126.273 1.00 72.52 O
ATOM 11 C2' A B 64 55.021 36.223 123.772 1.00 72.21 C
ATOM 12 O2' A B 64 56.218 36.948 123.965 1.00 76.74 O
ATOM 13 C1' A B 64 55.260 35.263 122.600 1.00 71.36 C
ATOM 14 N9 A B 64 54.230 35.042 121.582 1.00 68.94 N
ATOM 15 C8 A B 64 52.999 34.447 121.705 1.00 67.68 C
ATOM 16 N7 A B 64 52.379 34.274 120.561 1.00 65.79 N
ATOM 17 C5 A B 64 53.246 34.821 119.626 1.00 66.53 C
ATOM 18 C6 A B 64 53.187 34.932 118.222 1.00 65.70 C
ATOM 19 N6 A B 64 52.185 34.460 117.479 1.00 65.93 N
ATOM 20 N1 A B 64 54.215 35.543 117.597 1.00 65.06 N
ATOM 21 C2 A B 64 55.232 35.996 118.332 1.00 64.42 C
ATOM 22 N3 A B 64 55.412 35.938 119.646 1.00 66.56 N
ATOM 23 C4 A B 64 54.372 35.330 120.244 1.00 67.73 C
ATOM 24 P G B 65 55.429 37.107 126.704 1.00 71.83 P
ATOM 25 OP1 G B 65 55.177 37.177 128.167 1.00 71.63 O
ATOM 26 OP2 G B 65 54.760 38.087 125.806 1.00 73.68 O
ATOM 27 O5' G B 65 57.009 37.199 126.507 1.00 68.48 O
TER

Atoms:
C4: (51.730,38.374,118.997)
N3: (51.930,39.113,117.856)
OP1: (45.432,33.236,116.294)
OP2: (46.659,33.803,118.493)
C2: (51.440,38.849,116.605)
C1': (50.157,37.333,115.176)
C3': (49.650,35.070,114.691)
O5': (47.337,34.849,116.345)
O4': (48.760,37.117,115.259)
C5': (47.145,35.338,115.005)
P: (46.129,34.224,117.169)
C4': (48.425,35.938,114.490)
C2': (50.782,36.080,114.550)
O2': (51.073,36.348,113.198)
N1: (50.670,37.700,116.505)
O4: (52.320,38.694,120.032)
O2: (51.671,39.581,115.662)
C6: (50.411,36.931,117.615)
C5: (50.898,37.223,118.824)
O3': (49.708,34.062,113.696)
OP1: (52.003,32.025,126.188)
OP2: (51.408,31.414,123.760)
C3': (54.696,35.253,124.912)
C1': (55.260,35.263,122.600)
C5': (54.815,32.710,124.980)
O4': (55.621,34.001,123.120)
C8: (52.999,34.447,121.705)
O2': (56.218,36.948,123.965)
C6: (53.187,34.932,118.222)
C5: (53.246,34.821,119.626)
C4: (54.372,35.330,120.244)
P: (52.426,31.571,124.834)
C4': (55.482,33.999,124.560)
C2': (55.021,36.223,123.772)
C2: (55.232,35.996,118.332)
N1: (54.215,35.543,117.597)
N3: (55.412,35.938,119.646)
N6: (52.185,34.460,117.479)
N7: (52.379,34.274,120.561)
N9: (54.230,35.042,121.582)
O5': (53.543,32.578,124.310)
O3': (55.060,35.593,126.273)
Image (generated by PyMOL):
PyMOL image
show in jmol