Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B111:B64
Extra
PDB:
ATOM 1 O3' U A 110 45.434 35.638 117.911 1.00 70.48 O
ATOM 2 P U A 111 46.462 34.433 117.720 1.00 69.15 P
ATOM 3 OP1 U A 111 45.830 33.386 116.875 1.00 69.53 O
ATOM 4 OP2 U A 111 46.943 34.089 119.085 1.00 70.01 O
ATOM 5 O5' U A 111 47.641 35.100 116.888 1.00 67.89 O
ATOM 6 C5' U A 111 47.412 35.599 115.556 1.00 65.00 C
ATOM 7 C4' U A 111 48.680 36.204 115.000 1.00 63.41 C
ATOM 8 O4' U A 111 49.050 37.377 115.777 1.00 62.93 O
ATOM 9 C3' U A 111 49.907 35.312 115.096 1.00 62.67 C
ATOM 10 O3' U A 111 49.930 34.335 114.052 1.00 62.65 O
ATOM 11 C2' U A 111 51.047 36.323 114.998 1.00 61.99 C
ATOM 12 O2' U A 111 51.332 36.718 113.679 1.00 61.80 O
ATOM 13 C1' U A 111 50.455 37.545 115.714 1.00 62.14 C
ATOM 14 N1 U A 111 50.991 37.896 117.046 1.00 61.59 N
ATOM 15 C2 U A 111 51.892 38.942 117.095 1.00 60.31 C
ATOM 16 O2 U A 111 52.231 39.557 116.110 1.00 57.76 O
ATOM 17 N3 U A 111 52.387 39.238 118.340 1.00 61.38 N
ATOM 18 C4 U A 111 52.091 38.610 119.533 1.00 63.36 C
ATOM 19 O4 U A 111 52.669 38.969 120.571 1.00 64.72 O
ATOM 20 C5 U A 111 51.142 37.537 119.417 1.00 63.52 C
ATOM 21 C6 U A 111 50.633 37.224 118.205 1.00 62.10 C
ATOM 22 P C A 112 50.393 32.823 114.372 1.00 63.48 P
ATOM 23 OP1 C A 112 50.434 32.048 113.107 1.00 63.14 O
ATOM 24 OP2 C A 112 49.553 32.346 115.486 1.00 63.17 O
ATOM 25 O5' C A 112 51.892 32.942 114.905 1.00 61.98 O
TER
ATOM 1 O3' C B 63 53.519 30.420 125.384 1.00 76.08 O
ATOM 2 P A B 64 52.743 31.821 125.234 1.00 77.71 P
ATOM 3 OP1 A B 64 52.321 32.233 126.601 1.00 78.11 O
ATOM 4 OP2 A B 64 51.723 31.723 124.159 1.00 77.40 O
ATOM 5 O5' A B 64 53.884 32.820 124.762 1.00 77.87 O
ATOM 6 C5' A B 64 55.129 32.931 125.478 1.00 80.55 C
ATOM 7 C4' A B 64 55.801 34.222 125.096 1.00 82.37 C
ATOM 8 O4' A B 64 55.960 34.246 123.657 1.00 83.64 O
ATOM 9 C3' A B 64 54.988 35.460 125.438 1.00 82.66 C
ATOM 10 O3' A B 64 55.321 35.811 126.788 1.00 80.88 O
ATOM 11 C2' A B 64 55.328 36.446 124.321 1.00 83.49 C
ATOM 12 O2' A B 64 56.535 37.135 124.530 1.00 86.11 O
ATOM 13 C1' A B 64 55.564 35.504 123.144 1.00 83.97 C
ATOM 14 N9 A B 64 54.463 35.267 122.221 1.00 84.31 N
ATOM 15 C8 A B 64 53.194 34.821 122.481 1.00 85.18 C
ATOM 16 N7 A B 64 52.494 34.568 121.400 1.00 85.02 N
ATOM 17 C5 A B 64 53.352 34.906 120.362 1.00 84.34 C
ATOM 18 C6 A B 64 53.222 34.844 118.965 1.00 84.28 C
ATOM 19 N6 A B 64 52.144 34.368 118.345 1.00 85.06 N
ATOM 20 N1 A B 64 54.259 35.276 118.216 1.00 83.57 N
ATOM 21 C2 A B 64 55.355 35.717 118.838 1.00 83.86 C
ATOM 22 N3 A B 64 55.606 35.801 120.140 1.00 84.47 N
ATOM 23 C4 A B 64 54.551 35.374 120.856 1.00 84.39 C
ATOM 24 P G B 65 55.857 37.285 127.163 1.00 78.90 P
ATOM 25 OP1 G B 65 55.592 37.404 128.613 1.00 80.09 O
ATOM 26 OP2 G B 65 55.335 38.329 126.239 1.00 79.17 O
ATOM 27 O5' G B 65 57.436 37.183 126.997 1.00 76.22 O
TER
ATOM 2 P U A 111 46.462 34.433 117.720 1.00 69.15 P
ATOM 3 OP1 U A 111 45.830 33.386 116.875 1.00 69.53 O
ATOM 4 OP2 U A 111 46.943 34.089 119.085 1.00 70.01 O
ATOM 5 O5' U A 111 47.641 35.100 116.888 1.00 67.89 O
ATOM 6 C5' U A 111 47.412 35.599 115.556 1.00 65.00 C
ATOM 7 C4' U A 111 48.680 36.204 115.000 1.00 63.41 C
ATOM 8 O4' U A 111 49.050 37.377 115.777 1.00 62.93 O
ATOM 9 C3' U A 111 49.907 35.312 115.096 1.00 62.67 C
ATOM 10 O3' U A 111 49.930 34.335 114.052 1.00 62.65 O
ATOM 11 C2' U A 111 51.047 36.323 114.998 1.00 61.99 C
ATOM 12 O2' U A 111 51.332 36.718 113.679 1.00 61.80 O
ATOM 13 C1' U A 111 50.455 37.545 115.714 1.00 62.14 C
ATOM 14 N1 U A 111 50.991 37.896 117.046 1.00 61.59 N
ATOM 15 C2 U A 111 51.892 38.942 117.095 1.00 60.31 C
ATOM 16 O2 U A 111 52.231 39.557 116.110 1.00 57.76 O
ATOM 17 N3 U A 111 52.387 39.238 118.340 1.00 61.38 N
ATOM 18 C4 U A 111 52.091 38.610 119.533 1.00 63.36 C
ATOM 19 O4 U A 111 52.669 38.969 120.571 1.00 64.72 O
ATOM 20 C5 U A 111 51.142 37.537 119.417 1.00 63.52 C
ATOM 21 C6 U A 111 50.633 37.224 118.205 1.00 62.10 C
ATOM 22 P C A 112 50.393 32.823 114.372 1.00 63.48 P
ATOM 23 OP1 C A 112 50.434 32.048 113.107 1.00 63.14 O
ATOM 24 OP2 C A 112 49.553 32.346 115.486 1.00 63.17 O
ATOM 25 O5' C A 112 51.892 32.942 114.905 1.00 61.98 O
TER
ATOM 1 O3' C B 63 53.519 30.420 125.384 1.00 76.08 O
ATOM 2 P A B 64 52.743 31.821 125.234 1.00 77.71 P
ATOM 3 OP1 A B 64 52.321 32.233 126.601 1.00 78.11 O
ATOM 4 OP2 A B 64 51.723 31.723 124.159 1.00 77.40 O
ATOM 5 O5' A B 64 53.884 32.820 124.762 1.00 77.87 O
ATOM 6 C5' A B 64 55.129 32.931 125.478 1.00 80.55 C
ATOM 7 C4' A B 64 55.801 34.222 125.096 1.00 82.37 C
ATOM 8 O4' A B 64 55.960 34.246 123.657 1.00 83.64 O
ATOM 9 C3' A B 64 54.988 35.460 125.438 1.00 82.66 C
ATOM 10 O3' A B 64 55.321 35.811 126.788 1.00 80.88 O
ATOM 11 C2' A B 64 55.328 36.446 124.321 1.00 83.49 C
ATOM 12 O2' A B 64 56.535 37.135 124.530 1.00 86.11 O
ATOM 13 C1' A B 64 55.564 35.504 123.144 1.00 83.97 C
ATOM 14 N9 A B 64 54.463 35.267 122.221 1.00 84.31 N
ATOM 15 C8 A B 64 53.194 34.821 122.481 1.00 85.18 C
ATOM 16 N7 A B 64 52.494 34.568 121.400 1.00 85.02 N
ATOM 17 C5 A B 64 53.352 34.906 120.362 1.00 84.34 C
ATOM 18 C6 A B 64 53.222 34.844 118.965 1.00 84.28 C
ATOM 19 N6 A B 64 52.144 34.368 118.345 1.00 85.06 N
ATOM 20 N1 A B 64 54.259 35.276 118.216 1.00 83.57 N
ATOM 21 C2 A B 64 55.355 35.717 118.838 1.00 83.86 C
ATOM 22 N3 A B 64 55.606 35.801 120.140 1.00 84.47 N
ATOM 23 C4 A B 64 54.551 35.374 120.856 1.00 84.39 C
ATOM 24 P G B 65 55.857 37.285 127.163 1.00 78.90 P
ATOM 25 OP1 G B 65 55.592 37.404 128.613 1.00 80.09 O
ATOM 26 OP2 G B 65 55.335 38.329 126.239 1.00 79.17 O
ATOM 27 O5' G B 65 57.436 37.183 126.997 1.00 76.22 O
TER
Atoms:
C4: (52.091,38.610,119.533)
N3: (52.387,39.238,118.340)
OP1: (45.830,33.386,116.875)
OP2: (46.943,34.089,119.085)
C2: (51.892,38.942,117.095)
C1': (50.455,37.545,115.714)
C3': (49.907,35.312,115.096)
O5': (47.641,35.100,116.888)
O4': (49.050,37.377,115.777)
C5': (47.412,35.599,115.556)
P: (46.462,34.433,117.720)
C4': (48.680,36.204,115.000)
C2': (51.047,36.323,114.998)
O2': (51.332,36.718,113.679)
N1: (50.991,37.896,117.046)
O4: (52.669,38.969,120.571)
O2: (52.231,39.557,116.110)
C6: (50.633,37.224,118.205)
C5: (51.142,37.537,119.417)
O3': (49.930,34.335,114.052)
N3: (52.387,39.238,118.340)
OP1: (45.830,33.386,116.875)
OP2: (46.943,34.089,119.085)
C2: (51.892,38.942,117.095)
C1': (50.455,37.545,115.714)
C3': (49.907,35.312,115.096)
O5': (47.641,35.100,116.888)
O4': (49.050,37.377,115.777)
C5': (47.412,35.599,115.556)
P: (46.462,34.433,117.720)
C4': (48.680,36.204,115.000)
C2': (51.047,36.323,114.998)
O2': (51.332,36.718,113.679)
N1: (50.991,37.896,117.046)
O4: (52.669,38.969,120.571)
O2: (52.231,39.557,116.110)
C6: (50.633,37.224,118.205)
C5: (51.142,37.537,119.417)
O3': (49.930,34.335,114.052)
OP1: (52.321,32.233,126.601)
OP2: (51.723,31.723,124.159)
C3': (54.988,35.460,125.438)
C1': (55.564,35.504,123.144)
C5': (55.129,32.931,125.478)
O4': (55.960,34.246,123.657)
C8: (53.194,34.821,122.481)
O2': (56.535,37.135,124.530)
C6: (53.222,34.844,118.965)
C5: (53.352,34.906,120.362)
C4: (54.551,35.374,120.856)
P: (52.743,31.821,125.234)
C4': (55.801,34.222,125.096)
C2': (55.328,36.446,124.321)
C2: (55.355,35.717,118.838)
N1: (54.259,35.276,118.216)
N3: (55.606,35.801,120.140)
N6: (52.144,34.368,118.345)
N7: (52.494,34.568,121.400)
N9: (54.463,35.267,122.221)
O5': (53.884,32.820,124.762)
O3': (55.321,35.811,126.788)
OP2: (51.723,31.723,124.159)
C3': (54.988,35.460,125.438)
C1': (55.564,35.504,123.144)
C5': (55.129,32.931,125.478)
O4': (55.960,34.246,123.657)
C8: (53.194,34.821,122.481)
O2': (56.535,37.135,124.530)
C6: (53.222,34.844,118.965)
C5: (53.352,34.906,120.362)
C4: (54.551,35.374,120.856)
P: (52.743,31.821,125.234)
C4': (55.801,34.222,125.096)
C2': (55.328,36.446,124.321)
C2: (55.355,35.717,118.838)
N1: (54.259,35.276,118.216)
N3: (55.606,35.801,120.140)
N6: (52.144,34.368,118.345)
N7: (52.494,34.568,121.400)
N9: (54.463,35.267,122.221)
O5': (53.884,32.820,124.762)
O3': (55.321,35.811,126.788)
Image (generated by PyMOL):