Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01926:01924
Extra
PDB:
ATOM 1 O3' G A1925 97.119 123.853 104.149 1.00 51.70 O
ATOM 2 P U A1926 97.537 122.417 104.764 1.00 54.20 P
ATOM 3 OP1 U A1926 96.313 121.578 104.810 1.00 55.06 O
ATOM 4 OP2 U A1926 98.326 122.631 106.011 1.00 53.66 O
ATOM 5 O5' U A1926 98.508 121.764 103.686 1.00 52.47 O
ATOM 6 C5' U A1926 97.970 121.014 102.593 1.00 53.32 C
ATOM 7 C4' U A1926 98.589 119.634 102.530 1.00 54.80 C
ATOM 8 O4' U A1926 99.944 119.728 102.023 1.00 55.07 O
ATOM 9 C3' U A1926 98.661 118.805 103.812 1.00 54.33 C
ATOM 10 O3' U A1926 98.439 117.437 103.492 1.00 55.79 O
ATOM 11 C2' U A1926 100.121 118.957 104.227 1.00 54.42 C
ATOM 12 O2' U A1926 100.590 117.824 104.923 1.00 53.87 O
ATOM 13 C1' U A1926 100.819 119.018 102.872 1.00 54.42 C
ATOM 14 N1 U A1926 102.119 119.708 102.868 1.00 54.96 N
ATOM 15 C2 U A1926 103.225 119.004 102.416 1.00 54.66 C
ATOM 16 O2 U A1926 103.175 117.845 102.069 1.00 53.98 O
ATOM 17 N3 U A1926 104.398 119.715 102.392 1.00 55.64 N
ATOM 18 C4 U A1926 104.582 121.027 102.779 1.00 57.25 C
ATOM 19 O4 U A1926 105.708 121.530 102.709 1.00 57.61 O
ATOM 20 C5 U A1926 103.398 121.682 103.253 1.00 57.19 C
ATOM 21 C6 U A1926 102.238 121.017 103.281 1.00 56.07 C
ATOM 22 P A A1927 97.219 116.640 104.172 1.00 56.43 P
ATOM 23 OP1 A A1927 97.426 115.201 103.859 1.00 56.47 O
ATOM 24 OP2 A A1927 95.937 117.294 103.811 1.00 56.00 O
ATOM 25 O5' A A1927 97.445 116.832 105.730 1.00 55.91 O
TER
ATOM 1 O3' U B1923 100.348 121.330 111.677 1.00 52.32 O
ATOM 2 P A B1924 99.958 122.805 111.167 1.00 53.27 P
ATOM 3 OP1 A B1924 100.412 123.772 112.203 1.00 53.52 O
ATOM 4 OP2 A B1924 98.527 122.788 110.760 1.00 54.40 O
ATOM 5 O5' A B1924 100.837 123.011 109.853 1.00 51.41 O
ATOM 6 C5' A B1924 101.819 124.051 109.787 1.00 50.53 C
ATOM 7 C4' A B1924 102.364 124.188 108.384 1.00 50.84 C
ATOM 8 O4' A B1924 103.148 123.011 108.045 1.00 48.84 O
ATOM 9 C3' A B1924 101.355 124.385 107.248 1.00 50.74 C
ATOM 10 O3' A B1924 101.854 125.324 106.308 1.00 50.33 O
ATOM 11 C2' A B1924 101.337 123.023 106.570 1.00 51.05 C
ATOM 12 O2' A B1924 101.029 123.119 105.189 1.00 52.79 O
ATOM 13 C1' A B1924 102.784 122.574 106.761 1.00 50.12 C
ATOM 14 N9 A B1924 102.973 121.128 106.677 1.00 50.34 N
ATOM 15 C8 A B1924 102.047 120.138 106.885 1.00 49.50 C
ATOM 16 N7 A B1924 102.497 118.936 106.641 1.00 49.54 N
ATOM 17 C5 A B1924 103.814 119.144 106.268 1.00 49.04 C
ATOM 18 C6 A B1924 104.821 118.266 105.866 1.00 49.07 C
ATOM 19 N6 A B1924 104.643 116.950 105.739 1.00 49.43 N
ATOM 20 N1 A B1924 106.031 118.790 105.580 1.00 49.89 N
ATOM 21 C2 A B1924 106.196 120.115 105.678 1.00 50.00 C
ATOM 22 N3 A B1924 105.319 121.046 106.028 1.00 50.07 N
ATOM 23 C4 A B1924 104.130 120.486 106.314 1.00 50.20 C
ATOM 24 P G B1925 101.209 126.785 106.233 1.00 50.00 P
ATOM 25 OP1 G B1925 102.237 127.682 105.653 1.00 51.13 O
ATOM 26 OP2 G B1925 100.639 127.085 107.570 1.00 49.71 O
ATOM 27 O5' G B1925 100.007 126.647 105.195 1.00 51.47 O
TER
ATOM 2 P U A1926 97.537 122.417 104.764 1.00 54.20 P
ATOM 3 OP1 U A1926 96.313 121.578 104.810 1.00 55.06 O
ATOM 4 OP2 U A1926 98.326 122.631 106.011 1.00 53.66 O
ATOM 5 O5' U A1926 98.508 121.764 103.686 1.00 52.47 O
ATOM 6 C5' U A1926 97.970 121.014 102.593 1.00 53.32 C
ATOM 7 C4' U A1926 98.589 119.634 102.530 1.00 54.80 C
ATOM 8 O4' U A1926 99.944 119.728 102.023 1.00 55.07 O
ATOM 9 C3' U A1926 98.661 118.805 103.812 1.00 54.33 C
ATOM 10 O3' U A1926 98.439 117.437 103.492 1.00 55.79 O
ATOM 11 C2' U A1926 100.121 118.957 104.227 1.00 54.42 C
ATOM 12 O2' U A1926 100.590 117.824 104.923 1.00 53.87 O
ATOM 13 C1' U A1926 100.819 119.018 102.872 1.00 54.42 C
ATOM 14 N1 U A1926 102.119 119.708 102.868 1.00 54.96 N
ATOM 15 C2 U A1926 103.225 119.004 102.416 1.00 54.66 C
ATOM 16 O2 U A1926 103.175 117.845 102.069 1.00 53.98 O
ATOM 17 N3 U A1926 104.398 119.715 102.392 1.00 55.64 N
ATOM 18 C4 U A1926 104.582 121.027 102.779 1.00 57.25 C
ATOM 19 O4 U A1926 105.708 121.530 102.709 1.00 57.61 O
ATOM 20 C5 U A1926 103.398 121.682 103.253 1.00 57.19 C
ATOM 21 C6 U A1926 102.238 121.017 103.281 1.00 56.07 C
ATOM 22 P A A1927 97.219 116.640 104.172 1.00 56.43 P
ATOM 23 OP1 A A1927 97.426 115.201 103.859 1.00 56.47 O
ATOM 24 OP2 A A1927 95.937 117.294 103.811 1.00 56.00 O
ATOM 25 O5' A A1927 97.445 116.832 105.730 1.00 55.91 O
TER
ATOM 1 O3' U B1923 100.348 121.330 111.677 1.00 52.32 O
ATOM 2 P A B1924 99.958 122.805 111.167 1.00 53.27 P
ATOM 3 OP1 A B1924 100.412 123.772 112.203 1.00 53.52 O
ATOM 4 OP2 A B1924 98.527 122.788 110.760 1.00 54.40 O
ATOM 5 O5' A B1924 100.837 123.011 109.853 1.00 51.41 O
ATOM 6 C5' A B1924 101.819 124.051 109.787 1.00 50.53 C
ATOM 7 C4' A B1924 102.364 124.188 108.384 1.00 50.84 C
ATOM 8 O4' A B1924 103.148 123.011 108.045 1.00 48.84 O
ATOM 9 C3' A B1924 101.355 124.385 107.248 1.00 50.74 C
ATOM 10 O3' A B1924 101.854 125.324 106.308 1.00 50.33 O
ATOM 11 C2' A B1924 101.337 123.023 106.570 1.00 51.05 C
ATOM 12 O2' A B1924 101.029 123.119 105.189 1.00 52.79 O
ATOM 13 C1' A B1924 102.784 122.574 106.761 1.00 50.12 C
ATOM 14 N9 A B1924 102.973 121.128 106.677 1.00 50.34 N
ATOM 15 C8 A B1924 102.047 120.138 106.885 1.00 49.50 C
ATOM 16 N7 A B1924 102.497 118.936 106.641 1.00 49.54 N
ATOM 17 C5 A B1924 103.814 119.144 106.268 1.00 49.04 C
ATOM 18 C6 A B1924 104.821 118.266 105.866 1.00 49.07 C
ATOM 19 N6 A B1924 104.643 116.950 105.739 1.00 49.43 N
ATOM 20 N1 A B1924 106.031 118.790 105.580 1.00 49.89 N
ATOM 21 C2 A B1924 106.196 120.115 105.678 1.00 50.00 C
ATOM 22 N3 A B1924 105.319 121.046 106.028 1.00 50.07 N
ATOM 23 C4 A B1924 104.130 120.486 106.314 1.00 50.20 C
ATOM 24 P G B1925 101.209 126.785 106.233 1.00 50.00 P
ATOM 25 OP1 G B1925 102.237 127.682 105.653 1.00 51.13 O
ATOM 26 OP2 G B1925 100.639 127.085 107.570 1.00 49.71 O
ATOM 27 O5' G B1925 100.007 126.647 105.195 1.00 51.47 O
TER
Atoms:
C4: (104.582,121.027,102.779)
N3: (104.398,119.715,102.392)
OP1: (96.313,121.578,104.810)
OP2: (98.326,122.631,106.011)
C2: (103.225,119.004,102.416)
C1': (100.819,119.018,102.872)
C3': (98.661,118.805,103.812)
O5': (98.508,121.764,103.686)
O4': (99.944,119.728,102.023)
C5': (97.970,121.014,102.593)
P: (97.537,122.417,104.764)
C4': (98.589,119.634,102.530)
C2': (100.121,118.957,104.227)
O2': (100.590,117.824,104.923)
N1: (102.119,119.708,102.868)
O4: (105.708,121.530,102.709)
O2: (103.175,117.845,102.069)
C6: (102.238,121.017,103.281)
C5: (103.398,121.682,103.253)
O3': (98.439,117.437,103.492)
N3: (104.398,119.715,102.392)
OP1: (96.313,121.578,104.810)
OP2: (98.326,122.631,106.011)
C2: (103.225,119.004,102.416)
C1': (100.819,119.018,102.872)
C3': (98.661,118.805,103.812)
O5': (98.508,121.764,103.686)
O4': (99.944,119.728,102.023)
C5': (97.970,121.014,102.593)
P: (97.537,122.417,104.764)
C4': (98.589,119.634,102.530)
C2': (100.121,118.957,104.227)
O2': (100.590,117.824,104.923)
N1: (102.119,119.708,102.868)
O4: (105.708,121.530,102.709)
O2: (103.175,117.845,102.069)
C6: (102.238,121.017,103.281)
C5: (103.398,121.682,103.253)
O3': (98.439,117.437,103.492)
OP1: (100.412,123.772,112.203)
OP2: (98.527,122.788,110.760)
C3': (101.355,124.385,107.248)
C1': (102.784,122.574,106.761)
C5': (101.819,124.051,109.787)
O4': (103.148,123.011,108.045)
C8: (102.047,120.138,106.885)
O2': (101.029,123.119,105.189)
C6: (104.821,118.266,105.866)
C5: (103.814,119.144,106.268)
C4: (104.130,120.486,106.314)
P: (99.958,122.805,111.167)
C4': (102.364,124.188,108.384)
C2': (101.337,123.023,106.570)
C2: (106.196,120.115,105.678)
N1: (106.031,118.790,105.580)
N3: (105.319,121.046,106.028)
N6: (104.643,116.950,105.739)
N7: (102.497,118.936,106.641)
N9: (102.973,121.128,106.677)
O5': (100.837,123.011,109.853)
O3': (101.854,125.324,106.308)
OP2: (98.527,122.788,110.760)
C3': (101.355,124.385,107.248)
C1': (102.784,122.574,106.761)
C5': (101.819,124.051,109.787)
O4': (103.148,123.011,108.045)
C8: (102.047,120.138,106.885)
O2': (101.029,123.119,105.189)
C6: (104.821,118.266,105.866)
C5: (103.814,119.144,106.268)
C4: (104.130,120.486,106.314)
P: (99.958,122.805,111.167)
C4': (102.364,124.188,108.384)
C2': (101.337,123.023,106.570)
C2: (106.196,120.115,105.678)
N1: (106.031,118.790,105.580)
N3: (105.319,121.046,106.028)
N6: (104.643,116.950,105.739)
N7: (102.497,118.936,106.641)
N9: (102.973,121.128,106.677)
O5': (100.837,123.011,109.853)
O3': (101.854,125.324,106.308)
Image (generated by PyMOL):