ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OWW:B21:B20

Extra

PDB:
ATOM 1 P U A 21 -13.735 -34.136 43.303 1.00 71.58 P
ATOM 2 OP1 U A 21 -12.731 -33.079 43.026 1.00 71.59 O
ATOM 3 OP2 U A 21 -14.301 -34.282 44.662 1.00 71.61 O
ATOM 4 O5' U A 21 -14.956 -34.009 42.274 1.00 71.13 O
ATOM 5 C5' U A 21 -15.153 -32.802 41.537 1.00 70.83 C
ATOM 6 C4' U A 21 -16.623 -32.414 41.446 1.00 70.16 C
ATOM 7 O4' U A 21 -17.455 -33.596 41.356 1.00 71.00 O
ATOM 8 C3' U A 21 -17.152 -31.578 42.607 1.00 69.18 C
ATOM 9 O3' U A 21 -17.769 -30.401 42.082 1.00 65.94 O
ATOM 10 C2' U A 21 -18.141 -32.484 43.347 1.00 70.32 C
ATOM 11 O2' U A 21 -19.328 -31.812 43.716 1.00 70.51 O
ATOM 12 C1' U A 21 -18.471 -33.581 42.338 1.00 71.85 C
ATOM 13 N1 U A 21 -18.557 -34.959 42.937 1.00 74.15 N
ATOM 14 C2 U A 21 -19.753 -35.400 43.497 1.00 75.29 C
ATOM 15 O2 U A 21 -20.775 -34.730 43.547 1.00 75.94 O
ATOM 16 N3 U A 21 -19.706 -36.679 44.012 1.00 75.54 N
ATOM 17 C4 U A 21 -18.615 -37.540 44.017 1.00 75.56 C
ATOM 18 O4 U A 21 -18.730 -38.653 44.515 1.00 76.35 O
ATOM 19 C5 U A 21 -17.407 -37.019 43.419 1.00 75.11 C
ATOM 20 C6 U A 21 -17.429 -35.777 42.913 1.00 74.70 C
ATOM 21 P C A 22 -16.928 -29.055 41.842 1.00 63.56 P
ATOM 22 OP1 C A 22 -17.747 -28.164 40.988 1.00 63.85 O
ATOM 23 OP2 C A 22 -15.547 -29.389 41.427 1.00 62.72 O
ATOM 24 O5' C A 22 -16.852 -28.460 43.326 1.00 61.62 O
TER

ATOM 1 O3' U B 19 -15.374 -38.241 53.171 1.00 83.48 O
ATOM 2 P A B 20 -14.364 -39.243 52.436 1.00 86.28 P
ATOM 3 OP1 A B 20 -14.691 -40.603 52.929 1.00 86.03 O
ATOM 4 OP2 A B 20 -12.981 -38.722 52.568 1.00 86.26 O
ATOM 5 O5' A B 20 -14.787 -39.092 50.890 1.00 87.65 O
ATOM 6 C5' A B 20 -14.939 -40.225 50.020 1.00 90.03 C
ATOM 7 C4' A B 20 -14.864 -39.832 48.550 1.00 91.87 C
ATOM 8 O4' A B 20 -16.021 -39.035 48.182 1.00 93.32 O
ATOM 9 C3' A B 20 -13.638 -39.012 48.143 1.00 92.64 C
ATOM 10 O3' A B 20 -12.864 -39.724 47.186 1.00 92.30 O
ATOM 11 C2' A B 20 -14.211 -37.732 47.537 1.00 93.52 C
ATOM 12 O2' A B 20 -13.484 -37.315 46.398 1.00 93.31 O
ATOM 13 C1' A B 20 -15.629 -38.153 47.148 1.00 94.37 C
ATOM 14 N9 A B 20 -16.589 -37.042 46.993 1.00 96.32 N
ATOM 15 C8 A B 20 -16.292 -35.782 46.536 1.00 97.13 C
ATOM 16 N7 A B 20 -17.312 -34.958 46.478 1.00 97.89 N
ATOM 17 C5 A B 20 -18.373 -35.725 46.925 1.00 97.97 C
ATOM 18 C6 A B 20 -19.744 -35.423 47.097 1.00 98.49 C
ATOM 19 N6 A B 20 -20.268 -34.221 46.822 1.00 98.87 N
ATOM 20 N1 A B 20 -20.552 -36.406 47.563 1.00 98.38 N
ATOM 21 C2 A B 20 -20.014 -37.607 47.836 1.00 97.97 C
ATOM 22 N3 A B 20 -18.742 -38.006 47.712 1.00 97.38 N
ATOM 23 C4 A B 20 -17.953 -37.014 47.248 1.00 97.23 C
TER

Atoms:
C4: (-18.615,-37.540,44.017)
N3: (-19.706,-36.679,44.012)
OP1: (-12.731,-33.079,43.026)
OP2: (-14.301,-34.282,44.662)
C2: (-19.753,-35.400,43.497)
C1': (-18.471,-33.581,42.338)
C3': (-17.152,-31.578,42.607)
O5': (-14.956,-34.009,42.274)
O4': (-17.455,-33.596,41.356)
C5': (-15.153,-32.802,41.537)
P: (-13.735,-34.136,43.303)
C4': (-16.623,-32.414,41.446)
C2': (-18.141,-32.484,43.347)
O2': (-19.328,-31.812,43.716)
N1: (-18.557,-34.959,42.937)
O4: (-18.730,-38.653,44.515)
O2: (-20.775,-34.730,43.547)
C6: (-17.429,-35.777,42.913)
C5: (-17.407,-37.019,43.419)
O3': (-17.769,-30.401,42.082)
OP1: (-14.691,-40.603,52.929)
OP2: (-12.981,-38.722,52.568)
C3': (-13.638,-39.012,48.143)
C1': (-15.629,-38.153,47.148)
C5': (-14.939,-40.225,50.020)
O4': (-16.021,-39.035,48.182)
C8: (-16.292,-35.782,46.536)
O2': (-13.484,-37.315,46.398)
C6: (-19.744,-35.423,47.097)
C5: (-18.373,-35.725,46.925)
C4: (-17.953,-37.014,47.248)
P: (-14.364,-39.243,52.436)
C4': (-14.864,-39.832,48.550)
C2': (-14.211,-37.732,47.537)
C2: (-20.014,-37.607,47.836)
N1: (-20.552,-36.406,47.563)
N3: (-18.742,-38.006,47.712)
N6: (-20.268,-34.221,46.822)
N7: (-17.312,-34.958,46.478)
N9: (-16.589,-37.042,46.993)
O5': (-14.787,-39.092,50.890)
O3': (-12.864,-39.724,47.186)
Image (generated by PyMOL):
PyMOL image
show in jmol