ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A539:A537

Extra

PDB:
ATOM 1 O3' U A 538 -25.243 74.490 74.952 1.00 69.69 O
ATOM 2 P U A 539 -25.520 75.977 75.473 1.00 70.75 P
ATOM 3 OP1 U A 539 -26.988 76.151 75.504 1.00 61.54 O
ATOM 4 OP2 U A 539 -24.710 76.921 74.676 1.00 82.12 O
ATOM 5 O5' U A 539 -24.979 76.018 76.972 1.00 62.29 O
ATOM 6 C5' U A 539 -24.564 77.296 77.429 1.00 74.47 C
ATOM 7 C4' U A 539 -24.391 77.342 78.932 1.00 73.52 C
ATOM 8 O4' U A 539 -25.673 77.549 79.568 1.00 66.58 O
ATOM 9 C3' U A 539 -23.784 76.076 79.529 1.00 70.81 C
ATOM 10 O3' U A 539 -22.638 76.401 80.324 1.00 68.08 O
ATOM 11 C2' U A 539 -24.903 75.496 80.377 1.00 62.69 C
ATOM 12 O2' U A 539 -24.437 74.923 81.582 1.00 71.31 O
ATOM 13 C1' U A 539 -25.731 76.725 80.703 1.00 67.58 C
ATOM 14 N1 U A 539 -27.107 76.305 80.861 1.00 68.83 N
ATOM 15 C2 U A 539 -27.729 76.450 82.081 1.00 80.00 C
ATOM 16 O2 U A 539 -27.176 76.940 83.055 1.00 89.76 O
ATOM 17 N3 U A 539 -29.031 75.999 82.102 1.00 82.21 N
ATOM 18 C4 U A 539 -29.734 75.429 81.046 1.00 95.11 C
ATOM 19 O4 U A 539 -30.898 75.062 81.192 1.00 96.74 O
ATOM 20 C5 U A 539 -28.994 75.313 79.815 1.00 83.82 C
ATOM 21 C6 U A 539 -27.730 75.742 79.771 1.00 70.90 C
ATOM 22 P C A 540 -21.678 75.232 80.863 1.00 63.15 P
ATOM 23 OP1 C A 540 -22.198 73.933 80.354 1.00 69.96 O
ATOM 24 OP2 C A 540 -21.489 75.455 82.316 1.00 61.63 O
ATOM 25 O5' C A 540 -20.281 75.527 80.120 1.00 64.40 O
TER

ATOM 1 O3' G B 536 -28.697 68.684 75.044 1.00 50.22 O
ATOM 2 P A B 537 -28.423 70.233 74.722 1.00 53.56 P
ATOM 3 OP1 A B 537 -29.608 71.023 75.180 1.00 35.58 O
ATOM 4 OP2 A B 537 -27.954 70.272 73.311 1.00 50.47 O
ATOM 5 O5' A B 537 -27.181 70.523 75.713 1.00 54.50 O
ATOM 6 C5' A B 537 -26.436 71.724 75.714 1.00 44.20 C
ATOM 7 C4' A B 537 -25.830 71.956 77.087 1.00 38.07 C
ATOM 8 O4' A B 537 -26.879 72.091 78.071 1.00 35.64 O
ATOM 9 C3' A B 537 -24.955 70.842 77.661 1.00 49.04 C
ATOM 10 O3' A B 537 -23.640 71.315 77.883 1.00 49.51 O
ATOM 11 C2' A B 537 -25.565 70.529 79.021 1.00 52.26 C
ATOM 12 O2' A B 537 -24.563 70.334 79.991 1.00 63.48 O
ATOM 13 C1' A B 537 -26.247 71.844 79.299 1.00 37.50 C
ATOM 14 N9 A B 537 -27.220 71.809 80.374 1.00 34.62 N
ATOM 15 C8 A B 537 -27.024 72.235 81.652 1.00 50.26 C
ATOM 16 N7 A B 537 -28.073 72.102 82.427 1.00 55.38 N
ATOM 17 C5 A B 537 -29.031 71.549 81.595 1.00 51.50 C
ATOM 18 C6 A B 537 -30.370 71.169 81.819 1.00 53.15 C
ATOM 19 N6 A B 537 -30.976 71.301 83.000 1.00 66.34 N
ATOM 20 N1 A B 537 -31.058 70.650 80.781 1.00 56.40 N
ATOM 21 C2 A B 537 -30.434 70.525 79.597 1.00 61.61 C
ATOM 22 N3 A B 537 -29.180 70.847 79.262 1.00 61.57 N
ATOM 23 C4 A B 537 -28.521 71.361 80.321 1.00 51.13 C
ATOM 24 P U B 538 -22.478 70.919 76.866 1.00 73.77 P
ATOM 25 OP1 U B 538 -22.897 69.725 76.100 1.00 88.34 O
ATOM 26 OP2 U B 538 -21.206 70.920 77.628 1.00 78.18 O
ATOM 27 O5' U B 538 -22.502 72.156 75.856 1.00 74.02 O
TER

Atoms:
C4: (-29.734,75.429,81.046)
N3: (-29.031,75.999,82.102)
OP1: (-26.988,76.151,75.504)
OP2: (-24.710,76.921,74.676)
C2: (-27.729,76.450,82.081)
C1': (-25.731,76.725,80.703)
C3': (-23.784,76.076,79.529)
O5': (-24.979,76.018,76.972)
O4': (-25.673,77.549,79.568)
C5': (-24.564,77.296,77.429)
P: (-25.520,75.977,75.473)
C4': (-24.391,77.342,78.932)
C2': (-24.903,75.496,80.377)
O2': (-24.437,74.923,81.582)
N1: (-27.107,76.305,80.861)
O4: (-30.898,75.062,81.192)
O2: (-27.176,76.940,83.055)
C6: (-27.730,75.742,79.771)
C5: (-28.994,75.313,79.815)
O3': (-22.638,76.401,80.324)
OP1: (-29.608,71.023,75.180)
OP2: (-27.954,70.272,73.311)
C3': (-24.955,70.842,77.661)
C1': (-26.247,71.844,79.299)
C5': (-26.436,71.724,75.714)
O4': (-26.879,72.091,78.071)
C8: (-27.024,72.235,81.652)
O2': (-24.563,70.334,79.991)
C6: (-30.370,71.169,81.819)
C5: (-29.031,71.549,81.595)
C4: (-28.521,71.361,80.321)
P: (-28.423,70.233,74.722)
C4': (-25.830,71.956,77.087)
C2': (-25.565,70.529,79.021)
C2: (-30.434,70.525,79.597)
N1: (-31.058,70.650,80.781)
N3: (-29.180,70.847,79.262)
N6: (-30.976,71.301,83.000)
N7: (-28.073,72.102,82.427)
N9: (-27.220,71.809,80.374)
O5': (-27.181,70.523,75.713)
O3': (-23.640,71.315,77.883)
Image (generated by PyMOL):
PyMOL image
show in jmol