ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U9S:A78:A61

Extra

PDB:
ATOM 1 O3' G A 77 75.657 -23.411 124.026 1.00 86.55 O
ATOM 2 P U A 78 74.061 -23.401 123.844 1.00 87.38 P
ATOM 3 OP1 U A 78 73.701 -23.629 122.417 1.00 83.73 O
ATOM 4 OP2 U A 78 73.581 -22.169 124.528 1.00 84.03 O
ATOM 5 O5' U A 78 73.601 -24.676 124.693 1.00 87.32 O
ATOM 6 C5' U A 78 72.219 -24.926 124.952 1.00 84.51 C
ATOM 7 C4' U A 78 72.049 -25.854 126.137 1.00 73.94 C
ATOM 8 O4' U A 78 72.914 -25.446 127.224 1.00 70.23 O
ATOM 9 C3' U A 78 70.651 -25.783 126.723 1.00 71.41 C
ATOM 10 O3' U A 78 69.825 -26.702 126.027 1.00 73.36 O
ATOM 11 C2' U A 78 70.856 -26.214 128.170 1.00 67.43 C
ATOM 12 O2' U A 78 70.814 -27.604 128.381 1.00 69.82 O
ATOM 13 C1' U A 78 72.260 -25.682 128.454 1.00 68.29 C
ATOM 14 N1 U A 78 72.375 -24.492 129.309 1.00 66.71 N
ATOM 15 C2 U A 78 71.953 -24.625 130.615 1.00 70.74 C
ATOM 16 O2 U A 78 71.390 -25.645 131.023 1.00 77.90 O
ATOM 17 N3 U A 78 72.204 -23.531 131.418 1.00 63.60 N
ATOM 18 C4 U A 78 72.801 -22.340 131.033 1.00 57.61 C
ATOM 19 O4 U A 78 72.993 -21.465 131.865 1.00 55.96 O
ATOM 20 C5 U A 78 73.154 -22.265 129.655 1.00 55.26 C
ATOM 21 C6 U A 78 72.927 -23.315 128.856 1.00 64.20 C
ATOM 22 P G A 79 68.540 -26.171 125.231 1.00 83.25 P
ATOM 23 OP1 G A 79 67.942 -27.317 124.493 1.00 85.95 O
ATOM 24 OP2 G A 79 68.996 -24.981 124.471 1.00 80.22 O
ATOM 25 O5' G A 79 67.532 -25.726 126.392 1.00 84.37 O
TER

ATOM 1 O3' C B 60 68.058 -15.185 125.855 1.00 56.74 O
ATOM 2 P A B 61 69.500 -15.794 125.543 1.00 66.05 P
ATOM 3 OP1 A B 61 70.375 -14.677 125.097 1.00 69.35 O
ATOM 4 OP2 A B 61 69.257 -16.941 124.618 1.00 52.87 O
ATOM 5 O5' A B 61 70.028 -16.345 126.952 1.00 62.16 O
ATOM 6 C5' A B 61 70.359 -15.475 128.044 1.00 72.02 C
ATOM 7 C4' A B 61 70.798 -16.300 129.245 1.00 84.25 C
ATOM 8 O4' A B 61 69.934 -17.461 129.312 1.00 92.72 O
ATOM 9 C3' A B 61 72.216 -16.865 129.223 1.00 88.87 C
ATOM 10 O3' A B 61 73.126 -16.064 129.993 1.00 90.94 O
ATOM 11 C2' A B 61 72.078 -18.122 130.081 1.00 93.97 C
ATOM 12 O2' A B 61 72.146 -17.884 131.473 1.00103.98 O
ATOM 13 C1' A B 61 70.668 -18.590 129.744 1.00 90.83 C
ATOM 14 N9 A B 61 70.589 -19.582 128.689 1.00 86.26 N
ATOM 15 C8 A B 61 71.075 -19.508 127.409 1.00 87.90 C
ATOM 16 N7 A B 61 70.743 -20.530 126.663 1.00 89.92 N
ATOM 17 C5 A B 61 70.014 -21.340 127.521 1.00 86.90 C
ATOM 18 C6 A B 61 69.372 -22.567 127.334 1.00 89.04 C
ATOM 19 N6 A B 61 69.372 -23.225 126.173 1.00 90.25 N
ATOM 20 N1 A B 61 68.722 -23.105 128.393 1.00 88.24 N
ATOM 21 C2 A B 61 68.738 -22.439 129.559 1.00 85.92 C
ATOM 22 N3 A B 61 69.314 -21.275 129.856 1.00 78.74 N
ATOM 23 C4 A B 61 69.935 -20.775 128.779 1.00 82.13 C
ATOM 24 P G B 62 73.245 -14.479 129.763 1.00 88.83 P
ATOM 25 OP1 G B 62 72.635 -14.131 128.460 1.00 92.34 O
ATOM 26 OP2 G B 62 74.670 -14.148 130.017 1.00 86.19 O
ATOM 27 O5' G B 62 72.381 -13.815 130.936 1.00 86.78 O
TER

Atoms:
C4: (72.801,-22.340,131.033)
N3: (72.204,-23.531,131.418)
OP1: (73.701,-23.629,122.417)
OP2: (73.581,-22.169,124.528)
C2: (71.953,-24.625,130.615)
C1': (72.260,-25.682,128.454)
C3': (70.651,-25.783,126.723)
O5': (73.601,-24.676,124.693)
O4': (72.914,-25.446,127.224)
C5': (72.219,-24.926,124.952)
P: (74.061,-23.401,123.844)
C4': (72.049,-25.854,126.137)
C2': (70.856,-26.214,128.170)
O2': (70.814,-27.604,128.381)
N1: (72.375,-24.492,129.309)
O4: (72.993,-21.465,131.865)
O2: (71.390,-25.645,131.023)
C6: (72.927,-23.315,128.856)
C5: (73.154,-22.265,129.655)
O3': (69.825,-26.702,126.027)
OP1: (70.375,-14.677,125.097)
OP2: (69.257,-16.941,124.618)
C3': (72.216,-16.865,129.223)
C1': (70.668,-18.590,129.744)
C5': (70.359,-15.475,128.044)
O4': (69.934,-17.461,129.312)
C8: (71.075,-19.508,127.409)
O2': (72.146,-17.884,131.473)
C6: (69.372,-22.567,127.334)
C5: (70.014,-21.340,127.521)
C4: (69.935,-20.775,128.779)
P: (69.500,-15.794,125.543)
C4': (70.798,-16.300,129.245)
C2': (72.078,-18.122,130.081)
C2: (68.738,-22.439,129.559)
N1: (68.722,-23.105,128.393)
N3: (69.314,-21.275,129.856)
N6: (69.372,-23.225,126.173)
N7: (70.743,-20.530,126.663)
N9: (70.589,-19.582,128.689)
O5': (70.028,-16.345,126.952)
O3': (73.126,-16.064,129.993)
Image (generated by PyMOL):
PyMOL image
show in jmol