Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12772:12773
Extra
PDB:
ATOM 1 O3' U A2771 -5.988 49.643 19.116 1.00 68.94 O
ATOM 2 P U A2772 -7.033 48.686 18.344 1.00 63.03 P
ATOM 3 OP1 U A2772 -7.897 49.593 17.489 1.00 63.88 O
ATOM 4 OP2 U A2772 -7.685 47.826 19.356 1.00 62.59 O
ATOM 5 O5' U A2772 -6.092 47.807 17.421 1.00 62.74 O
ATOM 6 C5' U A2772 -5.276 48.397 16.429 1.00 63.05 C
ATOM 7 C4' U A2772 -4.259 47.409 15.937 1.00 62.58 C
ATOM 8 O4' U A2772 -3.420 46.992 17.040 1.00 61.85 O
ATOM 9 C3' U A2772 -4.816 46.109 15.389 1.00 62.46 C
ATOM 10 O3' U A2772 -5.229 46.233 14.062 1.00 63.07 O
ATOM 11 C2' U A2772 -3.662 45.140 15.570 1.00 61.76 C
ATOM 12 O2' U A2772 -2.697 45.288 14.528 1.00 61.90 O
ATOM 13 C1' U A2772 -3.059 45.638 16.888 1.00 61.34 C
ATOM 14 N1 U A2772 -3.593 44.890 18.035 1.00 60.86 N
ATOM 15 C2 U A2772 -2.900 43.764 18.416 1.00 60.18 C
ATOM 16 O2 U A2772 -1.904 43.438 17.834 1.00 60.00 O
ATOM 17 N3 U A2772 -3.435 43.067 19.472 1.00 59.77 N
ATOM 18 C4 U A2772 -4.597 43.409 20.148 1.00 59.98 C
ATOM 19 O4 U A2772 -5.003 42.719 21.064 1.00 59.59 O
ATOM 20 C5 U A2772 -5.258 44.600 19.701 1.00 60.69 C
ATOM 21 C6 U A2772 -4.750 45.287 18.671 1.00 61.10 C
ATOM 22 P A A2773 -6.414 45.329 13.494 1.00 69.38 P
ATOM 23 OP1 A A2773 -5.976 43.904 13.556 1.00 68.76 O
ATOM 24 OP2 A A2773 -6.779 45.916 12.156 1.00 70.15 O
ATOM 25 O5' A A2773 -7.573 45.565 14.546 1.00 69.42 O
TER
ATOM 1 O3' U B2772 -5.229 46.233 14.062 1.00 63.07 O
ATOM 2 P A B2773 -6.414 45.329 13.494 1.00 69.38 P
ATOM 3 OP1 A B2773 -5.976 43.904 13.556 1.00 68.76 O
ATOM 4 OP2 A B2773 -6.779 45.916 12.156 1.00 70.15 O
ATOM 5 O5' A B2773 -7.573 45.565 14.546 1.00 69.42 O
ATOM 6 C5' A B2773 -8.882 45.134 14.248 1.00 69.76 C
ATOM 7 C4' A B2773 -9.658 44.794 15.478 1.00 69.45 C
ATOM 8 O4' A B2773 -9.189 43.536 16.004 1.00 68.72 O
ATOM 9 C3' A B2773 -9.548 45.796 16.616 1.00 69.38 C
ATOM 10 O3' A B2773 -10.715 45.691 17.441 1.00 69.42 O
ATOM 11 C2' A B2773 -8.401 45.232 17.394 1.00 68.60 C
ATOM 12 O2' A B2773 -8.352 45.694 18.715 1.00 68.33 O
ATOM 13 C1' A B2773 -8.728 43.734 17.315 1.00 68.22 C
ATOM 14 N9 A B2773 -7.584 42.835 17.517 1.00 67.53 N
ATOM 15 C8 A B2773 -6.495 42.679 16.681 1.00 67.45 C
ATOM 16 N7 A B2773 -5.641 41.796 17.090 1.00 66.80 N
ATOM 17 C5 A B2773 -6.200 41.326 18.258 1.00 66.43 C
ATOM 18 C6 A B2773 -5.773 40.375 19.173 1.00 65.72 C
ATOM 19 N6 A B2773 -4.639 39.697 19.025 1.00 65.25 N
ATOM 20 N1 A B2773 -6.529 40.128 20.252 1.00 65.52 N
ATOM 21 C2 A B2773 -7.658 40.797 20.397 1.00 66.00 C
ATOM 22 N3 A B2773 -8.172 41.718 19.590 1.00 66.68 N
ATOM 23 C4 A B2773 -7.390 41.934 18.529 1.00 66.86 C
ATOM 24 P G B2774 -11.955 46.704 17.305 1.00 74.53 P
ATOM 25 OP1 G B2774 -12.297 46.808 15.849 1.00 75.15 O
ATOM 26 OP2 G B2774 -11.590 47.935 18.047 1.00 74.62 O
ATOM 27 O5' G B2774 -13.093 45.914 18.086 1.00 74.35 O
TER
ATOM 2 P U A2772 -7.033 48.686 18.344 1.00 63.03 P
ATOM 3 OP1 U A2772 -7.897 49.593 17.489 1.00 63.88 O
ATOM 4 OP2 U A2772 -7.685 47.826 19.356 1.00 62.59 O
ATOM 5 O5' U A2772 -6.092 47.807 17.421 1.00 62.74 O
ATOM 6 C5' U A2772 -5.276 48.397 16.429 1.00 63.05 C
ATOM 7 C4' U A2772 -4.259 47.409 15.937 1.00 62.58 C
ATOM 8 O4' U A2772 -3.420 46.992 17.040 1.00 61.85 O
ATOM 9 C3' U A2772 -4.816 46.109 15.389 1.00 62.46 C
ATOM 10 O3' U A2772 -5.229 46.233 14.062 1.00 63.07 O
ATOM 11 C2' U A2772 -3.662 45.140 15.570 1.00 61.76 C
ATOM 12 O2' U A2772 -2.697 45.288 14.528 1.00 61.90 O
ATOM 13 C1' U A2772 -3.059 45.638 16.888 1.00 61.34 C
ATOM 14 N1 U A2772 -3.593 44.890 18.035 1.00 60.86 N
ATOM 15 C2 U A2772 -2.900 43.764 18.416 1.00 60.18 C
ATOM 16 O2 U A2772 -1.904 43.438 17.834 1.00 60.00 O
ATOM 17 N3 U A2772 -3.435 43.067 19.472 1.00 59.77 N
ATOM 18 C4 U A2772 -4.597 43.409 20.148 1.00 59.98 C
ATOM 19 O4 U A2772 -5.003 42.719 21.064 1.00 59.59 O
ATOM 20 C5 U A2772 -5.258 44.600 19.701 1.00 60.69 C
ATOM 21 C6 U A2772 -4.750 45.287 18.671 1.00 61.10 C
ATOM 22 P A A2773 -6.414 45.329 13.494 1.00 69.38 P
ATOM 23 OP1 A A2773 -5.976 43.904 13.556 1.00 68.76 O
ATOM 24 OP2 A A2773 -6.779 45.916 12.156 1.00 70.15 O
ATOM 25 O5' A A2773 -7.573 45.565 14.546 1.00 69.42 O
TER
ATOM 1 O3' U B2772 -5.229 46.233 14.062 1.00 63.07 O
ATOM 2 P A B2773 -6.414 45.329 13.494 1.00 69.38 P
ATOM 3 OP1 A B2773 -5.976 43.904 13.556 1.00 68.76 O
ATOM 4 OP2 A B2773 -6.779 45.916 12.156 1.00 70.15 O
ATOM 5 O5' A B2773 -7.573 45.565 14.546 1.00 69.42 O
ATOM 6 C5' A B2773 -8.882 45.134 14.248 1.00 69.76 C
ATOM 7 C4' A B2773 -9.658 44.794 15.478 1.00 69.45 C
ATOM 8 O4' A B2773 -9.189 43.536 16.004 1.00 68.72 O
ATOM 9 C3' A B2773 -9.548 45.796 16.616 1.00 69.38 C
ATOM 10 O3' A B2773 -10.715 45.691 17.441 1.00 69.42 O
ATOM 11 C2' A B2773 -8.401 45.232 17.394 1.00 68.60 C
ATOM 12 O2' A B2773 -8.352 45.694 18.715 1.00 68.33 O
ATOM 13 C1' A B2773 -8.728 43.734 17.315 1.00 68.22 C
ATOM 14 N9 A B2773 -7.584 42.835 17.517 1.00 67.53 N
ATOM 15 C8 A B2773 -6.495 42.679 16.681 1.00 67.45 C
ATOM 16 N7 A B2773 -5.641 41.796 17.090 1.00 66.80 N
ATOM 17 C5 A B2773 -6.200 41.326 18.258 1.00 66.43 C
ATOM 18 C6 A B2773 -5.773 40.375 19.173 1.00 65.72 C
ATOM 19 N6 A B2773 -4.639 39.697 19.025 1.00 65.25 N
ATOM 20 N1 A B2773 -6.529 40.128 20.252 1.00 65.52 N
ATOM 21 C2 A B2773 -7.658 40.797 20.397 1.00 66.00 C
ATOM 22 N3 A B2773 -8.172 41.718 19.590 1.00 66.68 N
ATOM 23 C4 A B2773 -7.390 41.934 18.529 1.00 66.86 C
ATOM 24 P G B2774 -11.955 46.704 17.305 1.00 74.53 P
ATOM 25 OP1 G B2774 -12.297 46.808 15.849 1.00 75.15 O
ATOM 26 OP2 G B2774 -11.590 47.935 18.047 1.00 74.62 O
ATOM 27 O5' G B2774 -13.093 45.914 18.086 1.00 74.35 O
TER
Atoms:
C4: (-4.597,43.409,20.148)
N3: (-3.435,43.067,19.472)
OP1: (-7.897,49.593,17.489)
OP2: (-7.685,47.826,19.356)
C2: (-2.900,43.764,18.416)
C1': (-3.059,45.638,16.888)
C3': (-4.816,46.109,15.389)
O5': (-6.092,47.807,17.421)
O4': (-3.420,46.992,17.040)
C5': (-5.276,48.397,16.429)
P: (-7.033,48.686,18.344)
C4': (-4.259,47.409,15.937)
C2': (-3.662,45.140,15.570)
O2': (-2.697,45.288,14.528)
N1: (-3.593,44.890,18.035)
O4: (-5.003,42.719,21.064)
O2: (-1.904,43.438,17.834)
C6: (-4.750,45.287,18.671)
C5: (-5.258,44.600,19.701)
O3': (-5.229,46.233,14.062)
N3: (-3.435,43.067,19.472)
OP1: (-7.897,49.593,17.489)
OP2: (-7.685,47.826,19.356)
C2: (-2.900,43.764,18.416)
C1': (-3.059,45.638,16.888)
C3': (-4.816,46.109,15.389)
O5': (-6.092,47.807,17.421)
O4': (-3.420,46.992,17.040)
C5': (-5.276,48.397,16.429)
P: (-7.033,48.686,18.344)
C4': (-4.259,47.409,15.937)
C2': (-3.662,45.140,15.570)
O2': (-2.697,45.288,14.528)
N1: (-3.593,44.890,18.035)
O4: (-5.003,42.719,21.064)
O2: (-1.904,43.438,17.834)
C6: (-4.750,45.287,18.671)
C5: (-5.258,44.600,19.701)
O3': (-5.229,46.233,14.062)
OP1: (-5.976,43.904,13.556)
OP2: (-6.779,45.916,12.156)
C3': (-9.548,45.796,16.616)
C1': (-8.728,43.734,17.315)
C5': (-8.882,45.134,14.248)
O4': (-9.189,43.536,16.004)
C8: (-6.495,42.679,16.681)
O2': (-8.352,45.694,18.715)
C6: (-5.773,40.375,19.173)
C5: (-6.200,41.326,18.258)
C4: (-7.390,41.934,18.529)
P: (-6.414,45.329,13.494)
C4': (-9.658,44.794,15.478)
C2': (-8.401,45.232,17.394)
C2: (-7.658,40.797,20.397)
N1: (-6.529,40.128,20.252)
N3: (-8.172,41.718,19.590)
N6: (-4.639,39.697,19.025)
N7: (-5.641,41.796,17.090)
N9: (-7.584,42.835,17.517)
O5': (-7.573,45.565,14.546)
O3': (-10.715,45.691,17.441)
OP2: (-6.779,45.916,12.156)
C3': (-9.548,45.796,16.616)
C1': (-8.728,43.734,17.315)
C5': (-8.882,45.134,14.248)
O4': (-9.189,43.536,16.004)
C8: (-6.495,42.679,16.681)
O2': (-8.352,45.694,18.715)
C6: (-5.773,40.375,19.173)
C5: (-6.200,41.326,18.258)
C4: (-7.390,41.934,18.529)
P: (-6.414,45.329,13.494)
C4': (-9.658,44.794,15.478)
C2': (-8.401,45.232,17.394)
C2: (-7.658,40.797,20.397)
N1: (-6.529,40.128,20.252)
N3: (-8.172,41.718,19.590)
N6: (-4.639,39.697,19.025)
N7: (-5.641,41.796,17.090)
N9: (-7.584,42.835,17.517)
O5': (-7.573,45.565,14.546)
O3': (-10.715,45.691,17.441)
Image (generated by PyMOL):