ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:B106:B64

Extra

PDB:
ATOM 1 O3' G A 105 171.856 -66.405 -18.830 1.00 77.56 O
ATOM 2 P U A 106 172.854 -65.224 -19.278 1.00 75.03 P
ATOM 3 OP1 U A 106 173.667 -65.761 -20.396 1.00 79.25 O
ATOM 4 OP2 U A 106 173.525 -64.697 -18.045 1.00 70.25 O
ATOM 5 O5' U A 106 171.901 -64.090 -19.878 1.00 78.46 O
ATOM 6 C5' U A 106 171.284 -64.242 -21.161 1.00 79.63 C
ATOM 7 C4' U A 106 170.859 -62.893 -21.709 1.00 80.61 C
ATOM 8 O4' U A 106 169.818 -62.305 -20.887 1.00 79.86 O
ATOM 9 C3' U A 106 171.934 -61.817 -21.739 1.00 85.79 C
ATOM 10 O3' U A 106 172.740 -61.937 -22.896 1.00 89.04 O
ATOM 11 C2' U A 106 171.144 -60.510 -21.761 1.00 81.02 C
ATOM 12 O2' U A 106 170.829 -60.063 -23.070 1.00 76.24 O
ATOM 13 C1' U A 106 169.872 -60.886 -20.992 1.00 77.80 C
ATOM 14 N1 U A 106 169.771 -60.276 -19.654 1.00 71.96 N
ATOM 15 C2 U A 106 169.175 -59.021 -19.555 1.00 71.52 C
ATOM 16 O2 U A 106 168.727 -58.414 -20.509 1.00 74.51 O
ATOM 17 N3 U A 106 169.123 -58.502 -18.291 1.00 70.88 N
ATOM 18 C4 U A 106 169.586 -59.083 -17.133 1.00 68.56 C
ATOM 19 O4 U A 106 169.482 -58.471 -16.063 1.00 65.99 O
ATOM 20 C5 U A 106 170.179 -60.374 -17.311 1.00 72.04 C
ATOM 21 C6 U A 106 170.251 -60.912 -18.533 1.00 72.92 C
ATOM 22 P C A 107 174.063 -61.050 -23.036 1.00 81.00 P
ATOM 23 OP1 C A 107 175.063 -61.884 -23.750 1.00 79.41 O
ATOM 24 OP2 C A 107 174.386 -60.472 -21.700 1.00 85.49 O
ATOM 25 O5' C A 107 173.633 -59.836 -23.972 1.00 75.46 O
TER

ATOM 1 O3' C B 63 179.086 -55.699 -14.341 1.00102.36 O
ATOM 2 P A B 64 178.020 -56.685 -13.675 1.00101.74 P
ATOM 3 OP1 A B 64 178.307 -56.604 -12.222 1.00101.07 O
ATOM 4 OP2 A B 64 178.106 -57.996 -14.383 1.00101.71 O
ATOM 5 O5' A B 64 176.584 -56.054 -13.981 1.00102.87 O
ATOM 6 C5' A B 64 176.167 -54.803 -13.433 1.00100.63 C
ATOM 7 C4' A B 64 174.655 -54.751 -13.316 1.00 96.57 C
ATOM 8 O4' A B 64 174.062 -55.005 -14.618 1.00 96.01 O
ATOM 9 C3' A B 64 174.021 -55.764 -12.372 1.00 87.27 C
ATOM 10 O3' A B 64 174.191 -55.271 -11.015 1.00 81.50 O
ATOM 11 C2' A B 64 172.628 -55.985 -12.980 1.00 91.63 C
ATOM 12 O2' A B 64 171.661 -55.020 -12.633 1.00 91.13 O
ATOM 13 C1' A B 64 172.893 -55.793 -14.478 1.00 93.87 C
ATOM 14 N9 A B 64 173.051 -56.979 -15.333 1.00 93.96 N
ATOM 15 C8 A B 64 173.773 -58.137 -15.110 1.00 92.02 C
ATOM 16 N7 A B 64 173.844 -58.925 -16.161 1.00 86.10 N
ATOM 17 C5 A B 64 173.092 -58.264 -17.127 1.00 88.18 C
ATOM 18 C6 A B 64 172.816 -58.554 -18.480 1.00 87.81 C
ATOM 19 N6 A B 64 173.327 -59.608 -19.120 1.00 83.53 N
ATOM 20 N1 A B 64 172.009 -57.700 -19.164 1.00 85.48 N
ATOM 21 C2 A B 64 171.535 -56.618 -18.526 1.00 81.66 C
ATOM 22 N3 A B 64 171.747 -56.222 -17.265 1.00 85.36 N
ATOM 23 C4 A B 64 172.550 -57.094 -16.614 1.00 90.18 C
ATOM 24 P G B 65 172.937 -54.970 -10.044 1.00 77.69 P
ATOM 25 OP1 G B 65 173.420 -55.075 -8.639 1.00 67.36 O
ATOM 26 OP2 G B 65 171.775 -55.785 -10.459 1.00 92.49 O
ATOM 27 O5' G B 65 172.580 -53.438 -10.358 1.00 78.24 O
TER

Atoms:
C4: (169.586,-59.083,-17.133)
N3: (169.123,-58.502,-18.291)
OP1: (173.667,-65.761,-20.396)
OP2: (173.525,-64.697,-18.045)
C2: (169.175,-59.021,-19.555)
C1': (169.872,-60.886,-20.992)
C3': (171.934,-61.817,-21.739)
O5': (171.901,-64.090,-19.878)
O4': (169.818,-62.305,-20.887)
C5': (171.284,-64.242,-21.161)
P: (172.854,-65.224,-19.278)
C4': (170.859,-62.893,-21.709)
C2': (171.144,-60.510,-21.761)
O2': (170.829,-60.063,-23.070)
N1: (169.771,-60.276,-19.654)
O4: (169.482,-58.471,-16.063)
O2: (168.727,-58.414,-20.509)
C6: (170.251,-60.912,-18.533)
C5: (170.179,-60.374,-17.311)
O3': (172.740,-61.937,-22.896)
OP1: (178.307,-56.604,-12.222)
OP2: (178.106,-57.996,-14.383)
C3': (174.021,-55.764,-12.372)
C1': (172.893,-55.793,-14.478)
C5': (176.167,-54.803,-13.433)
O4': (174.062,-55.005,-14.618)
C8: (173.773,-58.137,-15.110)
O2': (171.661,-55.020,-12.633)
C6: (172.816,-58.554,-18.480)
C5: (173.092,-58.264,-17.127)
C4: (172.550,-57.094,-16.614)
P: (178.020,-56.685,-13.675)
C4': (174.655,-54.751,-13.316)
C2': (172.628,-55.985,-12.980)
C2: (171.535,-56.618,-18.526)
N1: (172.009,-57.700,-19.164)
N3: (171.747,-56.222,-17.265)
N6: (173.327,-59.608,-19.120)
N7: (173.844,-58.925,-16.161)
N9: (173.051,-56.979,-15.333)
O5': (176.584,-56.054,-13.981)
O3': (174.191,-55.271,-11.015)
Image (generated by PyMOL):
PyMOL image
show in jmol