ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:01070:0567

Extra

PDB:
ATOM 1 O3' G A1069 12.751 99.191 132.690 1.00 43.30 O
ATOM 2 P U A1070 13.320 98.707 134.113 1.00 43.76 P
ATOM 3 OP1 U A1070 12.494 99.370 135.147 1.00 46.61 O
ATOM 4 OP2 U A1070 14.797 98.888 134.137 1.00 48.02 O
ATOM 5 O5' U A1070 13.072 97.140 134.107 1.00 43.27 O
ATOM 6 C5' U A1070 11.748 96.599 133.981 1.00 46.16 C
ATOM 7 C4' U A1070 11.815 95.092 133.930 1.00 47.08 C
ATOM 8 O4' U A1070 12.467 94.683 132.701 1.00 47.32 O
ATOM 9 C3' U A1070 12.668 94.448 135.009 1.00 47.49 C
ATOM 10 O3' U A1070 11.978 94.332 136.240 1.00 51.82 O
ATOM 11 C2' U A1070 12.995 93.098 134.396 1.00 48.52 C
ATOM 12 O2' U A1070 11.927 92.179 134.500 1.00 48.62 O
ATOM 13 C1' U A1070 13.196 93.486 132.929 1.00 47.66 C
ATOM 14 N1 U A1070 14.609 93.696 132.569 1.00 46.70 N
ATOM 15 C2 U A1070 15.376 92.564 132.331 1.00 47.00 C
ATOM 16 O2 U A1070 14.929 91.435 132.411 1.00 49.85 O
ATOM 17 N3 U A1070 16.685 92.803 131.997 1.00 45.70 N
ATOM 18 C4 U A1070 17.301 94.029 131.884 1.00 46.43 C
ATOM 19 O4 U A1070 18.491 94.075 131.576 1.00 45.42 O
ATOM 20 C5 U A1070 16.450 95.155 132.148 1.00 45.50 C
ATOM 21 C6 U A1070 15.165 94.956 132.470 1.00 46.13 C
ATOM 22 P G A1071 12.800 94.368 137.620 1.00 52.92 P
ATOM 23 OP1 G A1071 11.773 94.381 138.692 1.00 55.51 O
ATOM 24 OP2 G A1071 13.814 95.448 137.570 1.00 54.04 O
ATOM 25 O5' G A1071 13.546 92.960 137.651 1.00 52.16 O
TER

ATOM 1 O3' C B 566 5.925 87.821 138.738 1.00 56.08 O
ATOM 2 P G B 567 5.080 88.392 137.491 1.00 58.25 P
ATOM 3 OP1 G B 567 3.868 89.077 138.026 1.00 55.13 O
ATOM 4 OP2 G B 567 4.929 87.279 136.507 1.00 54.50 O
ATOM 5 O5' G B 567 6.019 89.518 136.857 1.00 56.00 O
ATOM 6 C5' G B 567 6.411 90.685 137.621 1.00 53.76 C
ATOM 7 C4' G B 567 7.550 91.406 136.927 1.00 52.73 C
ATOM 8 O4' G B 567 8.692 90.518 136.847 1.00 51.72 O
ATOM 9 C3' G B 567 7.281 91.828 135.488 1.00 51.89 C
ATOM 10 O3' G B 567 6.664 93.113 135.468 1.00 50.36 O
ATOM 11 C2' G B 567 8.677 91.858 134.880 1.00 50.94 C
ATOM 12 O2' G B 567 9.384 93.034 135.216 1.00 54.62 O
ATOM 13 C1' G B 567 9.352 90.697 135.608 1.00 50.72 C
ATOM 14 N9 G B 567 9.354 89.417 134.910 1.00 49.92 N
ATOM 15 C8 G B 567 8.305 88.542 134.773 1.00 48.89 C
ATOM 16 N7 G B 567 8.638 87.440 134.156 1.00 49.53 N
ATOM 17 C5 G B 567 9.982 87.605 133.855 1.00 47.37 C
ATOM 18 C6 G B 567 10.891 86.735 133.199 1.00 47.21 C
ATOM 19 O6 G B 567 10.684 85.612 132.736 1.00 47.27 O
ATOM 20 N1 G B 567 12.159 87.297 133.104 1.00 46.57 N
ATOM 21 C2 G B 567 12.509 88.538 133.573 1.00 47.71 C
ATOM 22 N2 G B 567 13.787 88.908 133.385 1.00 47.86 N
ATOM 23 N3 G B 567 11.672 89.358 134.185 1.00 47.88 N
ATOM 24 C4 G B 567 10.434 88.828 134.294 1.00 48.31 C
ATOM 25 P A B 568 5.603 93.477 134.318 1.00 52.72 P
ATOM 26 OP1 A B 568 4.857 94.665 134.801 1.00 49.73 O
ATOM 27 OP2 A B 568 4.865 92.244 133.928 1.00 49.22 O
ATOM 28 O5' A B 568 6.498 93.933 133.079 1.00 53.27 O
TER

Atoms:
C4: (17.301,94.029,131.884)
N3: (16.685,92.803,131.997)
OP1: (12.494,99.370,135.147)
OP2: (14.797,98.888,134.137)
C2: (15.376,92.564,132.331)
C1': (13.196,93.486,132.929)
C3': (12.668,94.448,135.009)
O5': (13.072,97.140,134.107)
O4': (12.467,94.683,132.701)
C5': (11.748,96.599,133.981)
P: (13.320,98.707,134.113)
C4': (11.815,95.092,133.930)
C2': (12.995,93.098,134.396)
O2': (11.927,92.179,134.500)
N1: (14.609,93.696,132.569)
O4: (18.491,94.075,131.576)
O2: (14.929,91.435,132.411)
C6: (15.165,94.956,132.470)
C5: (16.450,95.155,132.148)
O3': (11.978,94.332,136.240)
OP1: (3.868,89.077,138.026)
OP2: (4.929,87.279,136.507)
C3': (7.281,91.828,135.488)
C1': (9.352,90.697,135.608)
C5': (6.411,90.685,137.621)
O6: (10.684,85.612,132.736)
O4': (8.692,90.518,136.847)
C8: (8.305,88.542,134.773)
C2: (12.509,88.538,133.573)
C6: (10.891,86.735,133.199)
C5: (9.982,87.605,133.855)
C4: (10.434,88.828,134.294)
P: (5.080,88.392,137.491)
C4': (7.550,91.406,136.927)
C2': (8.677,91.858,134.880)
O2': (9.384,93.034,135.216)
N1: (12.159,87.297,133.104)
N2: (13.787,88.908,133.385)
N3: (11.672,89.358,134.185)
N7: (8.638,87.440,134.156)
N9: (9.354,89.417,134.910)
O5': (6.019,89.518,136.857)
O3': (6.664,93.113,135.468)
Image (generated by PyMOL):
PyMOL image
show in jmol