Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2395:A2417
Extra
PDB:
ATOM 1 O3' A A2394 62.893 115.198 136.044 1.00 41.03 O
ATOM 2 P U A2395 62.851 115.858 137.500 1.00 42.30 P
ATOM 3 OP1 U A2395 64.067 115.336 138.167 1.00 40.73 O
ATOM 4 OP2 U A2395 61.528 115.718 138.162 1.00 40.60 O
ATOM 5 O5' U A2395 63.053 117.396 137.189 1.00 39.74 O
ATOM 6 C5' U A2395 64.159 117.843 136.418 1.00 39.92 C
ATOM 7 C4' U A2395 64.828 118.980 137.137 1.00 40.61 C
ATOM 8 O4' U A2395 63.903 120.082 137.249 1.00 40.47 O
ATOM 9 C3' U A2395 65.237 118.665 138.566 1.00 40.45 C
ATOM 10 O3' U A2395 66.308 119.522 138.886 1.00 42.05 O
ATOM 11 C2' U A2395 64.028 119.096 139.370 1.00 40.22 C
ATOM 12 O2' U A2395 64.358 119.356 140.717 1.00 39.91 O
ATOM 13 C1' U A2395 63.646 120.360 138.609 1.00 39.39 C
ATOM 14 N1 U A2395 62.236 120.738 138.713 1.00 38.89 N
ATOM 15 C2 U A2395 61.954 122.037 139.036 1.00 37.51 C
ATOM 16 O2 U A2395 62.819 122.890 139.196 1.00 37.73 O
ATOM 17 N3 U A2395 60.623 122.311 139.149 1.00 38.02 N
ATOM 18 C4 U A2395 59.572 121.433 138.948 1.00 38.30 C
ATOM 19 O4 U A2395 58.422 121.800 139.166 1.00 40.16 O
ATOM 20 C5 U A2395 59.957 120.120 138.586 1.00 38.60 C
ATOM 21 C6 U A2395 61.242 119.822 138.493 1.00 38.85 C
ATOM 22 P C A2396 67.761 118.913 139.015 1.00 43.43 P
ATOM 23 OP1 C A2396 68.248 118.640 137.664 1.00 44.53 O
ATOM 24 OP2 C A2396 67.622 117.808 139.987 1.00 44.17 O
ATOM 25 O5' C A2396 68.638 120.095 139.594 1.00 42.33 O
TER
ATOM 1 O3' C B2416 53.429 116.974 143.304 1.00 39.84 O
ATOM 2 P A B2417 53.417 117.390 141.761 1.00 39.92 P
ATOM 3 OP1 A B2417 52.007 117.353 141.346 1.00 40.74 O
ATOM 4 OP2 A B2417 54.412 116.575 141.034 1.00 36.75 O
ATOM 5 O5' A B2417 53.916 118.899 141.759 1.00 37.61 O
ATOM 6 C5' A B2417 53.138 119.958 142.312 1.00 39.81 C
ATOM 7 C4' A B2417 53.975 121.204 142.354 1.00 41.48 C
ATOM 8 O4' A B2417 55.137 120.921 143.168 1.00 42.71 O
ATOM 9 C3' A B2417 54.565 121.629 141.012 1.00 43.34 C
ATOM 10 O3' A B2417 53.649 122.407 140.218 1.00 43.81 O
ATOM 11 C2' A B2417 55.804 122.413 141.433 1.00 44.09 C
ATOM 12 O2' A B2417 55.546 123.759 141.775 1.00 45.13 O
ATOM 13 C1' A B2417 56.251 121.642 142.677 1.00 42.79 C
ATOM 14 N9 A B2417 57.335 120.712 142.378 1.00 41.15 N
ATOM 15 C8 A B2417 57.271 119.404 141.989 1.00 42.12 C
ATOM 16 N7 A B2417 58.440 118.869 141.741 1.00 41.53 N
ATOM 17 C5 A B2417 59.333 119.894 141.997 1.00 41.25 C
ATOM 18 C6 A B2417 60.733 119.966 141.912 1.00 41.22 C
ATOM 19 N6 A B2417 61.488 118.947 141.509 1.00 41.45 N
ATOM 20 N1 A B2417 61.326 121.128 142.252 1.00 40.84 N
ATOM 21 C2 A B2417 60.548 122.142 142.642 1.00 40.74 C
ATOM 22 N3 A B2417 59.219 122.198 142.752 1.00 41.47 N
ATOM 23 C4 A B2417 58.667 121.027 142.408 1.00 40.94 C
ATOM 24 P A B2418 53.771 122.418 138.610 1.00 43.30 P
ATOM 25 OP1 A B2418 52.579 123.136 138.103 1.00 44.94 O
ATOM 26 OP2 A B2418 54.087 121.077 138.087 1.00 45.87 O
ATOM 27 O5' A B2418 55.061 123.287 138.307 1.00 43.24 O
TER
ATOM 2 P U A2395 62.851 115.858 137.500 1.00 42.30 P
ATOM 3 OP1 U A2395 64.067 115.336 138.167 1.00 40.73 O
ATOM 4 OP2 U A2395 61.528 115.718 138.162 1.00 40.60 O
ATOM 5 O5' U A2395 63.053 117.396 137.189 1.00 39.74 O
ATOM 6 C5' U A2395 64.159 117.843 136.418 1.00 39.92 C
ATOM 7 C4' U A2395 64.828 118.980 137.137 1.00 40.61 C
ATOM 8 O4' U A2395 63.903 120.082 137.249 1.00 40.47 O
ATOM 9 C3' U A2395 65.237 118.665 138.566 1.00 40.45 C
ATOM 10 O3' U A2395 66.308 119.522 138.886 1.00 42.05 O
ATOM 11 C2' U A2395 64.028 119.096 139.370 1.00 40.22 C
ATOM 12 O2' U A2395 64.358 119.356 140.717 1.00 39.91 O
ATOM 13 C1' U A2395 63.646 120.360 138.609 1.00 39.39 C
ATOM 14 N1 U A2395 62.236 120.738 138.713 1.00 38.89 N
ATOM 15 C2 U A2395 61.954 122.037 139.036 1.00 37.51 C
ATOM 16 O2 U A2395 62.819 122.890 139.196 1.00 37.73 O
ATOM 17 N3 U A2395 60.623 122.311 139.149 1.00 38.02 N
ATOM 18 C4 U A2395 59.572 121.433 138.948 1.00 38.30 C
ATOM 19 O4 U A2395 58.422 121.800 139.166 1.00 40.16 O
ATOM 20 C5 U A2395 59.957 120.120 138.586 1.00 38.60 C
ATOM 21 C6 U A2395 61.242 119.822 138.493 1.00 38.85 C
ATOM 22 P C A2396 67.761 118.913 139.015 1.00 43.43 P
ATOM 23 OP1 C A2396 68.248 118.640 137.664 1.00 44.53 O
ATOM 24 OP2 C A2396 67.622 117.808 139.987 1.00 44.17 O
ATOM 25 O5' C A2396 68.638 120.095 139.594 1.00 42.33 O
TER
ATOM 1 O3' C B2416 53.429 116.974 143.304 1.00 39.84 O
ATOM 2 P A B2417 53.417 117.390 141.761 1.00 39.92 P
ATOM 3 OP1 A B2417 52.007 117.353 141.346 1.00 40.74 O
ATOM 4 OP2 A B2417 54.412 116.575 141.034 1.00 36.75 O
ATOM 5 O5' A B2417 53.916 118.899 141.759 1.00 37.61 O
ATOM 6 C5' A B2417 53.138 119.958 142.312 1.00 39.81 C
ATOM 7 C4' A B2417 53.975 121.204 142.354 1.00 41.48 C
ATOM 8 O4' A B2417 55.137 120.921 143.168 1.00 42.71 O
ATOM 9 C3' A B2417 54.565 121.629 141.012 1.00 43.34 C
ATOM 10 O3' A B2417 53.649 122.407 140.218 1.00 43.81 O
ATOM 11 C2' A B2417 55.804 122.413 141.433 1.00 44.09 C
ATOM 12 O2' A B2417 55.546 123.759 141.775 1.00 45.13 O
ATOM 13 C1' A B2417 56.251 121.642 142.677 1.00 42.79 C
ATOM 14 N9 A B2417 57.335 120.712 142.378 1.00 41.15 N
ATOM 15 C8 A B2417 57.271 119.404 141.989 1.00 42.12 C
ATOM 16 N7 A B2417 58.440 118.869 141.741 1.00 41.53 N
ATOM 17 C5 A B2417 59.333 119.894 141.997 1.00 41.25 C
ATOM 18 C6 A B2417 60.733 119.966 141.912 1.00 41.22 C
ATOM 19 N6 A B2417 61.488 118.947 141.509 1.00 41.45 N
ATOM 20 N1 A B2417 61.326 121.128 142.252 1.00 40.84 N
ATOM 21 C2 A B2417 60.548 122.142 142.642 1.00 40.74 C
ATOM 22 N3 A B2417 59.219 122.198 142.752 1.00 41.47 N
ATOM 23 C4 A B2417 58.667 121.027 142.408 1.00 40.94 C
ATOM 24 P A B2418 53.771 122.418 138.610 1.00 43.30 P
ATOM 25 OP1 A B2418 52.579 123.136 138.103 1.00 44.94 O
ATOM 26 OP2 A B2418 54.087 121.077 138.087 1.00 45.87 O
ATOM 27 O5' A B2418 55.061 123.287 138.307 1.00 43.24 O
TER
Atoms:
C4: (59.572,121.433,138.948)
N3: (60.623,122.311,139.149)
OP1: (64.067,115.336,138.167)
OP2: (61.528,115.718,138.162)
C2: (61.954,122.037,139.036)
C1': (63.646,120.360,138.609)
C3': (65.237,118.665,138.566)
O5': (63.053,117.396,137.189)
O4': (63.903,120.082,137.249)
C5': (64.159,117.843,136.418)
P: (62.851,115.858,137.500)
C4': (64.828,118.980,137.137)
C2': (64.028,119.096,139.370)
O2': (64.358,119.356,140.717)
N1: (62.236,120.738,138.713)
O4: (58.422,121.800,139.166)
O2: (62.819,122.890,139.196)
C6: (61.242,119.822,138.493)
C5: (59.957,120.120,138.586)
O3': (66.308,119.522,138.886)
N3: (60.623,122.311,139.149)
OP1: (64.067,115.336,138.167)
OP2: (61.528,115.718,138.162)
C2: (61.954,122.037,139.036)
C1': (63.646,120.360,138.609)
C3': (65.237,118.665,138.566)
O5': (63.053,117.396,137.189)
O4': (63.903,120.082,137.249)
C5': (64.159,117.843,136.418)
P: (62.851,115.858,137.500)
C4': (64.828,118.980,137.137)
C2': (64.028,119.096,139.370)
O2': (64.358,119.356,140.717)
N1: (62.236,120.738,138.713)
O4: (58.422,121.800,139.166)
O2: (62.819,122.890,139.196)
C6: (61.242,119.822,138.493)
C5: (59.957,120.120,138.586)
O3': (66.308,119.522,138.886)
OP1: (52.007,117.353,141.346)
OP2: (54.412,116.575,141.034)
C3': (54.565,121.629,141.012)
C1': (56.251,121.642,142.677)
C5': (53.138,119.958,142.312)
O4': (55.137,120.921,143.168)
C8: (57.271,119.404,141.989)
O2': (55.546,123.759,141.775)
C6: (60.733,119.966,141.912)
C5: (59.333,119.894,141.997)
C4: (58.667,121.027,142.408)
P: (53.417,117.390,141.761)
C4': (53.975,121.204,142.354)
C2': (55.804,122.413,141.433)
C2: (60.548,122.142,142.642)
N1: (61.326,121.128,142.252)
N3: (59.219,122.198,142.752)
N6: (61.488,118.947,141.509)
N7: (58.440,118.869,141.741)
N9: (57.335,120.712,142.378)
O5': (53.916,118.899,141.759)
O3': (53.649,122.407,140.218)
OP2: (54.412,116.575,141.034)
C3': (54.565,121.629,141.012)
C1': (56.251,121.642,142.677)
C5': (53.138,119.958,142.312)
O4': (55.137,120.921,143.168)
C8: (57.271,119.404,141.989)
O2': (55.546,123.759,141.775)
C6: (60.733,119.966,141.912)
C5: (59.333,119.894,141.997)
C4: (58.667,121.027,142.408)
P: (53.417,117.390,141.761)
C4': (53.975,121.204,142.354)
C2': (55.804,122.413,141.433)
C2: (60.548,122.142,142.642)
N1: (61.326,121.128,142.252)
N3: (59.219,122.198,142.752)
N6: (61.488,118.947,141.509)
N7: (58.440,118.869,141.741)
N9: (57.335,120.712,142.378)
O5': (53.916,118.899,141.759)
O3': (53.649,122.407,140.218)
Image (generated by PyMOL):