Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B11:B31
Extra
PDB:
ATOM 1 O3' G A 10 -11.105 -19.709 18.823 1.00 22.43 O
ATOM 2 P U A 11 -11.048 -21.280 19.086 1.00 20.81 P
ATOM 3 OP1 U A 11 -9.757 -21.813 18.582 1.00 19.82 O
ATOM 4 OP2 U A 11 -12.321 -21.840 18.586 1.00 19.64 O
ATOM 5 O5' U A 11 -11.029 -21.334 20.668 1.00 21.18 O
ATOM 6 C5' U A 11 -10.921 -22.570 21.348 1.00 23.50 C
ATOM 7 C4' U A 11 -11.432 -22.420 22.750 1.00 24.25 C
ATOM 8 O4' U A 11 -12.330 -21.287 22.834 1.00 24.44 O
ATOM 9 C3' U A 11 -12.228 -23.621 23.213 1.00 24.03 C
ATOM 10 O3' U A 11 -11.341 -24.535 23.831 1.00 23.94 O
ATOM 11 C2' U A 11 -13.175 -23.021 24.246 1.00 24.79 C
ATOM 12 O2' U A 11 -12.571 -22.948 25.519 1.00 28.05 O
ATOM 13 C1' U A 11 -13.377 -21.592 23.727 1.00 24.13 C
ATOM 14 N1 U A 11 -14.666 -21.311 23.076 1.00 24.00 N
ATOM 15 C2 U A 11 -15.663 -20.750 23.859 1.00 24.62 C
ATOM 16 O2 U A 11 -15.518 -20.505 25.045 1.00 24.91 O
ATOM 17 N3 U A 11 -16.842 -20.496 23.209 1.00 23.29 N
ATOM 18 C4 U A 11 -17.130 -20.747 21.889 1.00 24.57 C
ATOM 19 O4 U A 11 -18.261 -20.495 21.461 1.00 25.76 O
ATOM 20 C5 U A 11 -16.054 -21.330 21.140 1.00 24.10 C
ATOM 21 C6 U A 11 -14.888 -21.585 21.745 1.00 24.08 C
ATOM 22 P G A 12 -10.649 -25.707 22.979 1.00 24.12 P
ATOM 23 OP1 G A 12 -11.057 -25.633 21.554 1.00 23.13 O
ATOM 24 OP2 G A 12 -10.885 -26.959 23.753 1.00 24.06 O
ATOM 25 O5' G A 12 -9.091 -25.402 23.114 1.00 22.58 O
TER
ATOM 1 O3' A B 30 -14.045 -23.293 27.704 1.00 40.14 O
ATOM 2 P A B 31 -15.152 -24.399 28.064 1.00 41.75 P
ATOM 3 OP1 A B 31 -15.747 -24.081 29.383 1.00 41.56 O
ATOM 4 OP2 A B 31 -14.524 -25.729 27.846 1.00 41.11 O
ATOM 5 O5' A B 31 -16.274 -24.160 26.959 1.00 42.78 O
ATOM 6 C5' A B 31 -17.063 -22.960 26.973 1.00 45.21 C
ATOM 7 C4' A B 31 -18.430 -23.217 26.383 1.00 47.10 C
ATOM 8 O4' A B 31 -18.432 -23.010 24.949 1.00 47.91 O
ATOM 9 C3' A B 31 -19.019 -24.602 26.622 1.00 48.41 C
ATOM 10 O3' A B 31 -20.409 -24.445 26.851 1.00 49.26 O
ATOM 11 C2' A B 31 -18.837 -25.277 25.266 1.00 48.89 C
ATOM 12 O2' A B 31 -19.759 -26.322 25.029 1.00 49.86 O
ATOM 13 C1' A B 31 -19.091 -24.092 24.336 1.00 48.99 C
ATOM 14 N9 A B 31 -18.662 -24.188 22.941 1.00 50.22 N
ATOM 15 C8 A B 31 -19.421 -23.871 21.841 1.00 50.55 C
ATOM 16 N7 A B 31 -18.794 -24.025 20.702 1.00 51.31 N
ATOM 17 C5 A B 31 -17.536 -24.474 21.075 1.00 51.75 C
ATOM 18 C6 A B 31 -16.398 -24.814 20.330 1.00 53.25 C
ATOM 19 N6 A B 31 -16.338 -24.739 18.997 1.00 54.44 N
ATOM 20 N1 A B 31 -15.306 -25.235 21.009 1.00 54.02 N
ATOM 21 C2 A B 31 -15.367 -25.301 22.345 1.00 53.55 C
ATOM 22 N3 A B 31 -16.375 -25.000 23.157 1.00 52.27 N
ATOM 23 C4 A B 31 -17.443 -24.588 22.451 1.00 51.27 C
ATOM 24 P A B 32 -20.955 -24.312 28.347 1.00 51.12 P
ATOM 25 OP1 A B 32 -20.399 -25.450 29.145 1.00 50.36 O
ATOM 26 OP2 A B 32 -22.429 -24.127 28.236 1.00 51.47 O
ATOM 27 O5' A B 32 -20.331 -22.945 28.876 1.00 50.28 O
TER
ATOM 2 P U A 11 -11.048 -21.280 19.086 1.00 20.81 P
ATOM 3 OP1 U A 11 -9.757 -21.813 18.582 1.00 19.82 O
ATOM 4 OP2 U A 11 -12.321 -21.840 18.586 1.00 19.64 O
ATOM 5 O5' U A 11 -11.029 -21.334 20.668 1.00 21.18 O
ATOM 6 C5' U A 11 -10.921 -22.570 21.348 1.00 23.50 C
ATOM 7 C4' U A 11 -11.432 -22.420 22.750 1.00 24.25 C
ATOM 8 O4' U A 11 -12.330 -21.287 22.834 1.00 24.44 O
ATOM 9 C3' U A 11 -12.228 -23.621 23.213 1.00 24.03 C
ATOM 10 O3' U A 11 -11.341 -24.535 23.831 1.00 23.94 O
ATOM 11 C2' U A 11 -13.175 -23.021 24.246 1.00 24.79 C
ATOM 12 O2' U A 11 -12.571 -22.948 25.519 1.00 28.05 O
ATOM 13 C1' U A 11 -13.377 -21.592 23.727 1.00 24.13 C
ATOM 14 N1 U A 11 -14.666 -21.311 23.076 1.00 24.00 N
ATOM 15 C2 U A 11 -15.663 -20.750 23.859 1.00 24.62 C
ATOM 16 O2 U A 11 -15.518 -20.505 25.045 1.00 24.91 O
ATOM 17 N3 U A 11 -16.842 -20.496 23.209 1.00 23.29 N
ATOM 18 C4 U A 11 -17.130 -20.747 21.889 1.00 24.57 C
ATOM 19 O4 U A 11 -18.261 -20.495 21.461 1.00 25.76 O
ATOM 20 C5 U A 11 -16.054 -21.330 21.140 1.00 24.10 C
ATOM 21 C6 U A 11 -14.888 -21.585 21.745 1.00 24.08 C
ATOM 22 P G A 12 -10.649 -25.707 22.979 1.00 24.12 P
ATOM 23 OP1 G A 12 -11.057 -25.633 21.554 1.00 23.13 O
ATOM 24 OP2 G A 12 -10.885 -26.959 23.753 1.00 24.06 O
ATOM 25 O5' G A 12 -9.091 -25.402 23.114 1.00 22.58 O
TER
ATOM 1 O3' A B 30 -14.045 -23.293 27.704 1.00 40.14 O
ATOM 2 P A B 31 -15.152 -24.399 28.064 1.00 41.75 P
ATOM 3 OP1 A B 31 -15.747 -24.081 29.383 1.00 41.56 O
ATOM 4 OP2 A B 31 -14.524 -25.729 27.846 1.00 41.11 O
ATOM 5 O5' A B 31 -16.274 -24.160 26.959 1.00 42.78 O
ATOM 6 C5' A B 31 -17.063 -22.960 26.973 1.00 45.21 C
ATOM 7 C4' A B 31 -18.430 -23.217 26.383 1.00 47.10 C
ATOM 8 O4' A B 31 -18.432 -23.010 24.949 1.00 47.91 O
ATOM 9 C3' A B 31 -19.019 -24.602 26.622 1.00 48.41 C
ATOM 10 O3' A B 31 -20.409 -24.445 26.851 1.00 49.26 O
ATOM 11 C2' A B 31 -18.837 -25.277 25.266 1.00 48.89 C
ATOM 12 O2' A B 31 -19.759 -26.322 25.029 1.00 49.86 O
ATOM 13 C1' A B 31 -19.091 -24.092 24.336 1.00 48.99 C
ATOM 14 N9 A B 31 -18.662 -24.188 22.941 1.00 50.22 N
ATOM 15 C8 A B 31 -19.421 -23.871 21.841 1.00 50.55 C
ATOM 16 N7 A B 31 -18.794 -24.025 20.702 1.00 51.31 N
ATOM 17 C5 A B 31 -17.536 -24.474 21.075 1.00 51.75 C
ATOM 18 C6 A B 31 -16.398 -24.814 20.330 1.00 53.25 C
ATOM 19 N6 A B 31 -16.338 -24.739 18.997 1.00 54.44 N
ATOM 20 N1 A B 31 -15.306 -25.235 21.009 1.00 54.02 N
ATOM 21 C2 A B 31 -15.367 -25.301 22.345 1.00 53.55 C
ATOM 22 N3 A B 31 -16.375 -25.000 23.157 1.00 52.27 N
ATOM 23 C4 A B 31 -17.443 -24.588 22.451 1.00 51.27 C
ATOM 24 P A B 32 -20.955 -24.312 28.347 1.00 51.12 P
ATOM 25 OP1 A B 32 -20.399 -25.450 29.145 1.00 50.36 O
ATOM 26 OP2 A B 32 -22.429 -24.127 28.236 1.00 51.47 O
ATOM 27 O5' A B 32 -20.331 -22.945 28.876 1.00 50.28 O
TER
Atoms:
C4: (-17.130,-20.747,21.889)
N3: (-16.842,-20.496,23.209)
OP1: (-9.757,-21.813,18.582)
OP2: (-12.321,-21.840,18.586)
C2: (-15.663,-20.750,23.859)
C1': (-13.377,-21.592,23.727)
C3': (-12.228,-23.621,23.213)
O5': (-11.029,-21.334,20.668)
O4': (-12.330,-21.287,22.834)
C5': (-10.921,-22.570,21.348)
P: (-11.048,-21.280,19.086)
C4': (-11.432,-22.420,22.750)
C2': (-13.175,-23.021,24.246)
O2': (-12.571,-22.948,25.519)
N1: (-14.666,-21.311,23.076)
O4: (-18.261,-20.495,21.461)
O2: (-15.518,-20.505,25.045)
C6: (-14.888,-21.585,21.745)
C5: (-16.054,-21.330,21.140)
O3': (-11.341,-24.535,23.831)
N3: (-16.842,-20.496,23.209)
OP1: (-9.757,-21.813,18.582)
OP2: (-12.321,-21.840,18.586)
C2: (-15.663,-20.750,23.859)
C1': (-13.377,-21.592,23.727)
C3': (-12.228,-23.621,23.213)
O5': (-11.029,-21.334,20.668)
O4': (-12.330,-21.287,22.834)
C5': (-10.921,-22.570,21.348)
P: (-11.048,-21.280,19.086)
C4': (-11.432,-22.420,22.750)
C2': (-13.175,-23.021,24.246)
O2': (-12.571,-22.948,25.519)
N1: (-14.666,-21.311,23.076)
O4: (-18.261,-20.495,21.461)
O2: (-15.518,-20.505,25.045)
C6: (-14.888,-21.585,21.745)
C5: (-16.054,-21.330,21.140)
O3': (-11.341,-24.535,23.831)
OP1: (-15.747,-24.081,29.383)
OP2: (-14.524,-25.729,27.846)
C3': (-19.019,-24.602,26.622)
C1': (-19.091,-24.092,24.336)
C5': (-17.063,-22.960,26.973)
O4': (-18.432,-23.010,24.949)
C8: (-19.421,-23.871,21.841)
O2': (-19.759,-26.322,25.029)
C6: (-16.398,-24.814,20.330)
C5: (-17.536,-24.474,21.075)
C4: (-17.443,-24.588,22.451)
P: (-15.152,-24.399,28.064)
C4': (-18.430,-23.217,26.383)
C2': (-18.837,-25.277,25.266)
C2: (-15.367,-25.301,22.345)
N1: (-15.306,-25.235,21.009)
N3: (-16.375,-25.000,23.157)
N6: (-16.338,-24.739,18.997)
N7: (-18.794,-24.025,20.702)
N9: (-18.662,-24.188,22.941)
O5': (-16.274,-24.160,26.959)
O3': (-20.409,-24.445,26.851)
OP2: (-14.524,-25.729,27.846)
C3': (-19.019,-24.602,26.622)
C1': (-19.091,-24.092,24.336)
C5': (-17.063,-22.960,26.973)
O4': (-18.432,-23.010,24.949)
C8: (-19.421,-23.871,21.841)
O2': (-19.759,-26.322,25.029)
C6: (-16.398,-24.814,20.330)
C5: (-17.536,-24.474,21.075)
C4: (-17.443,-24.588,22.451)
P: (-15.152,-24.399,28.064)
C4': (-18.430,-23.217,26.383)
C2': (-18.837,-25.277,25.266)
C2: (-15.367,-25.301,22.345)
N1: (-15.306,-25.235,21.009)
N3: (-16.375,-25.000,23.157)
N6: (-16.338,-24.739,18.997)
N7: (-18.794,-24.025,20.702)
N9: (-18.662,-24.188,22.941)
O5': (-16.274,-24.160,26.959)
O3': (-20.409,-24.445,26.851)
Image (generated by PyMOL):