ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01070:0567

Extra

PDB:
ATOM 1 O3' G A1069 12.669 99.011 132.488 1.00 50.56 O
ATOM 2 P U A1070 13.236 98.442 133.879 1.00 52.04 P
ATOM 3 OP1 U A1070 12.383 98.988 134.959 1.00 55.55 O
ATOM 4 OP2 U A1070 14.700 98.657 133.929 1.00 55.07 O
ATOM 5 O5' U A1070 13.016 96.874 133.763 1.00 53.57 O
ATOM 6 C5' U A1070 11.694 96.318 133.671 1.00 54.67 C
ATOM 7 C4' U A1070 11.774 94.814 133.657 1.00 54.69 C
ATOM 8 O4' U A1070 12.433 94.381 132.440 1.00 55.02 O
ATOM 9 C3' U A1070 12.622 94.196 134.755 1.00 55.40 C
ATOM 10 O3' U A1070 11.921 94.111 135.985 1.00 58.89 O
ATOM 11 C2' U A1070 12.950 92.833 134.168 1.00 56.80 C
ATOM 12 O2' U A1070 11.870 91.927 134.255 1.00 56.71 O
ATOM 13 C1' U A1070 13.168 93.195 132.697 1.00 55.45 C
ATOM 14 N1 U A1070 14.581 93.415 132.346 1.00 54.43 N
ATOM 15 C2 U A1070 15.339 92.297 132.042 1.00 54.98 C
ATOM 16 O2 U A1070 14.892 91.166 132.071 1.00 58.68 O
ATOM 17 N3 U A1070 16.641 92.549 131.704 1.00 54.27 N
ATOM 18 C4 U A1070 17.259 93.775 131.641 1.00 53.76 C
ATOM 19 O4 U A1070 18.440 93.830 131.311 1.00 53.37 O
ATOM 20 C5 U A1070 16.422 94.888 131.980 1.00 52.35 C
ATOM 21 C6 U A1070 15.142 94.677 132.312 1.00 54.10 C
ATOM 22 P G A1071 12.738 94.138 137.373 1.00 60.45 P
ATOM 23 OP1 G A1071 11.709 94.191 138.442 1.00 61.26 O
ATOM 24 OP2 G A1071 13.788 95.187 137.318 1.00 61.38 O
ATOM 25 O5' G A1071 13.454 92.716 137.409 1.00 58.69 O
TER

ATOM 1 O3' C B 566 5.854 87.629 138.512 1.00 66.20 O
ATOM 2 P G B 567 5.007 88.246 137.286 1.00 67.25 P
ATOM 3 OP1 G B 567 3.827 88.966 137.849 1.00 65.25 O
ATOM 4 OP2 G B 567 4.805 87.163 136.279 1.00 63.49 O
ATOM 5 O5' G B 567 5.969 89.349 136.652 1.00 65.12 O
ATOM 6 C5' G B 567 6.349 90.524 137.398 1.00 62.81 C
ATOM 7 C4' G B 567 7.464 91.251 136.682 1.00 61.25 C
ATOM 8 O4' G B 567 8.611 90.370 136.584 1.00 60.08 O
ATOM 9 C3' G B 567 7.161 91.660 135.247 1.00 60.23 C
ATOM 10 O3' G B 567 6.510 92.932 135.232 1.00 57.91 O
ATOM 11 C2' G B 567 8.550 91.708 134.620 1.00 59.35 C
ATOM 12 O2' G B 567 9.241 92.895 134.957 1.00 59.63 O
ATOM 13 C1' G B 567 9.247 90.549 135.335 1.00 58.83 C
ATOM 14 N9 G B 567 9.256 89.260 134.648 1.00 58.36 N
ATOM 15 C8 G B 567 8.209 88.383 134.515 1.00 57.46 C
ATOM 16 N7 G B 567 8.544 87.274 133.908 1.00 57.20 N
ATOM 17 C5 G B 567 9.889 87.435 133.608 1.00 55.92 C
ATOM 18 C6 G B 567 10.799 86.558 132.958 1.00 56.39 C
ATOM 19 O6 G B 567 10.590 85.431 132.502 1.00 57.32 O
ATOM 20 N1 G B 567 12.068 87.116 132.860 1.00 55.85 N
ATOM 21 C2 G B 567 12.420 88.359 133.321 1.00 56.84 C
ATOM 22 N2 G B 567 13.698 88.720 133.129 1.00 56.03 N
ATOM 23 N3 G B 567 11.582 89.188 133.927 1.00 56.43 N
ATOM 24 C4 G B 567 10.342 88.662 134.039 1.00 57.27 C
ATOM 25 P A B 568 5.455 93.288 134.072 1.00 59.76 P
ATOM 26 OP1 A B 568 4.651 94.433 134.564 1.00 56.75 O
ATOM 27 OP2 A B 568 4.773 92.047 133.615 1.00 56.35 O
ATOM 28 O5' A B 568 6.354 93.828 132.872 1.00 60.24 O
TER

Atoms:
C4: (17.259,93.775,131.641)
N3: (16.641,92.549,131.704)
OP1: (12.383,98.988,134.959)
OP2: (14.700,98.657,133.929)
C2: (15.339,92.297,132.042)
C1': (13.168,93.195,132.697)
C3': (12.622,94.196,134.755)
O5': (13.016,96.874,133.763)
O4': (12.433,94.381,132.440)
C5': (11.694,96.318,133.671)
P: (13.236,98.442,133.879)
C4': (11.774,94.814,133.657)
C2': (12.950,92.833,134.168)
O2': (11.870,91.927,134.255)
N1: (14.581,93.415,132.346)
O4: (18.440,93.830,131.311)
O2: (14.892,91.166,132.071)
C6: (15.142,94.677,132.312)
C5: (16.422,94.888,131.980)
O3': (11.921,94.111,135.985)
OP1: (3.827,88.966,137.849)
OP2: (4.805,87.163,136.279)
C3': (7.161,91.660,135.247)
C1': (9.247,90.549,135.335)
C5': (6.349,90.524,137.398)
O6: (10.590,85.431,132.502)
O4': (8.611,90.370,136.584)
C8: (8.209,88.383,134.515)
C2: (12.420,88.359,133.321)
C6: (10.799,86.558,132.958)
C5: (9.889,87.435,133.608)
C4: (10.342,88.662,134.039)
P: (5.007,88.246,137.286)
C4': (7.464,91.251,136.682)
C2': (8.550,91.708,134.620)
O2': (9.241,92.895,134.957)
N1: (12.068,87.116,132.860)
N2: (13.698,88.720,133.129)
N3: (11.582,89.188,133.927)
N7: (8.544,87.274,133.908)
N9: (9.256,89.260,134.648)
O5': (5.969,89.349,136.652)
O3': (6.510,92.932,135.232)
Image (generated by PyMOL):
PyMOL image
show in jmol