Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:02504:02505
Extra
PDB:
ATOM 1 O3' G A2503 18.055 144.214 116.224 1.00 42.70 O
ATOM 2 P U A2504 16.974 145.027 117.091 1.00 43.22 P
ATOM 3 OP1 U A2504 15.692 144.292 116.952 1.00 42.92 O
ATOM 4 OP2 U A2504 17.043 146.463 116.724 1.00 41.12 O
ATOM 5 O5' U A2504 17.470 144.865 118.595 1.00 40.97 O
ATOM 6 C5' U A2504 17.426 143.590 119.249 1.00 41.92 C
ATOM 7 C4' U A2504 18.185 143.651 120.548 1.00 44.46 C
ATOM 8 O4' U A2504 19.574 143.974 120.279 1.00 44.65 O
ATOM 9 C3' U A2504 17.733 144.735 121.514 1.00 46.52 C
ATOM 10 O3' U A2504 16.629 144.302 122.301 1.00 52.09 O
ATOM 11 C2' U A2504 18.971 144.931 122.369 1.00 45.52 C
ATOM 12 O2' U A2504 19.098 143.917 123.347 1.00 46.23 O
ATOM 13 C1' U A2504 20.085 144.785 121.327 1.00 44.16 C
ATOM 14 N1 U A2504 20.521 146.078 120.767 1.00 42.48 N
ATOM 15 C2 U A2504 21.534 146.746 121.425 1.00 42.07 C
ATOM 16 O2 U A2504 22.110 146.286 122.368 1.00 41.80 O
ATOM 17 N3 U A2504 21.858 147.976 120.918 1.00 41.53 N
ATOM 18 C4 U A2504 21.293 148.594 119.834 1.00 42.10 C
ATOM 19 O4 U A2504 21.682 149.719 119.514 1.00 43.02 O
ATOM 20 C5 U A2504 20.279 147.828 119.172 1.00 41.14 C
ATOM 21 C6 U A2504 19.933 146.628 119.652 1.00 40.37 C
ATOM 22 P A A2505 15.463 145.340 122.688 1.00 54.29 P
ATOM 23 OP1 A A2505 16.051 146.434 123.498 1.00 54.40 O
ATOM 24 OP2 A A2505 14.374 144.512 123.250 1.00 55.52 O
ATOM 25 O5' A A2505 14.994 145.918 121.283 1.00 57.15 O
TER
ATOM 1 O3' U B2504 16.629 144.302 122.301 1.00 52.09 O
ATOM 2 P A B2505 15.463 145.340 122.688 1.00 54.29 P
ATOM 3 OP1 A B2505 16.051 146.434 123.498 1.00 54.40 O
ATOM 4 OP2 A B2505 14.374 144.512 123.250 1.00 55.52 O
ATOM 5 O5' A B2505 14.994 145.918 121.283 1.00 57.15 O
ATOM 6 C5' A B2505 13.929 146.885 121.168 1.00 62.85 C
ATOM 7 C4' A B2505 14.413 148.091 120.392 1.00 67.70 C
ATOM 8 O4' A B2505 15.205 148.928 121.265 1.00 68.97 O
ATOM 9 C3' A B2505 15.344 147.769 119.228 1.00 71.10 C
ATOM 10 O3' A B2505 14.615 147.424 118.039 1.00 73.97 O
ATOM 11 C2' A B2505 16.169 149.044 119.069 1.00 71.55 C
ATOM 12 O2' A B2505 15.542 150.006 118.239 1.00 75.97 O
ATOM 13 C1' A B2505 16.214 149.571 120.508 1.00 71.13 C
ATOM 14 N9 A B2505 17.481 149.494 121.240 1.00 70.22 N
ATOM 15 C8 A B2505 17.868 148.584 122.196 1.00 68.75 C
ATOM 16 N7 A B2505 19.035 148.844 122.733 1.00 67.97 N
ATOM 17 C5 A B2505 19.457 149.990 122.073 1.00 69.28 C
ATOM 18 C6 A B2505 20.617 150.781 122.192 1.00 68.92 C
ATOM 19 N6 A B2505 21.596 150.531 123.062 1.00 68.82 N
ATOM 20 N1 A B2505 20.734 151.853 121.376 1.00 69.53 N
ATOM 21 C2 A B2505 19.747 152.107 120.505 1.00 70.29 C
ATOM 22 N3 A B2505 18.607 151.445 120.304 1.00 70.63 N
ATOM 23 C4 A B2505 18.521 150.386 121.132 1.00 70.09 C
TER
ATOM 2 P U A2504 16.974 145.027 117.091 1.00 43.22 P
ATOM 3 OP1 U A2504 15.692 144.292 116.952 1.00 42.92 O
ATOM 4 OP2 U A2504 17.043 146.463 116.724 1.00 41.12 O
ATOM 5 O5' U A2504 17.470 144.865 118.595 1.00 40.97 O
ATOM 6 C5' U A2504 17.426 143.590 119.249 1.00 41.92 C
ATOM 7 C4' U A2504 18.185 143.651 120.548 1.00 44.46 C
ATOM 8 O4' U A2504 19.574 143.974 120.279 1.00 44.65 O
ATOM 9 C3' U A2504 17.733 144.735 121.514 1.00 46.52 C
ATOM 10 O3' U A2504 16.629 144.302 122.301 1.00 52.09 O
ATOM 11 C2' U A2504 18.971 144.931 122.369 1.00 45.52 C
ATOM 12 O2' U A2504 19.098 143.917 123.347 1.00 46.23 O
ATOM 13 C1' U A2504 20.085 144.785 121.327 1.00 44.16 C
ATOM 14 N1 U A2504 20.521 146.078 120.767 1.00 42.48 N
ATOM 15 C2 U A2504 21.534 146.746 121.425 1.00 42.07 C
ATOM 16 O2 U A2504 22.110 146.286 122.368 1.00 41.80 O
ATOM 17 N3 U A2504 21.858 147.976 120.918 1.00 41.53 N
ATOM 18 C4 U A2504 21.293 148.594 119.834 1.00 42.10 C
ATOM 19 O4 U A2504 21.682 149.719 119.514 1.00 43.02 O
ATOM 20 C5 U A2504 20.279 147.828 119.172 1.00 41.14 C
ATOM 21 C6 U A2504 19.933 146.628 119.652 1.00 40.37 C
ATOM 22 P A A2505 15.463 145.340 122.688 1.00 54.29 P
ATOM 23 OP1 A A2505 16.051 146.434 123.498 1.00 54.40 O
ATOM 24 OP2 A A2505 14.374 144.512 123.250 1.00 55.52 O
ATOM 25 O5' A A2505 14.994 145.918 121.283 1.00 57.15 O
TER
ATOM 1 O3' U B2504 16.629 144.302 122.301 1.00 52.09 O
ATOM 2 P A B2505 15.463 145.340 122.688 1.00 54.29 P
ATOM 3 OP1 A B2505 16.051 146.434 123.498 1.00 54.40 O
ATOM 4 OP2 A B2505 14.374 144.512 123.250 1.00 55.52 O
ATOM 5 O5' A B2505 14.994 145.918 121.283 1.00 57.15 O
ATOM 6 C5' A B2505 13.929 146.885 121.168 1.00 62.85 C
ATOM 7 C4' A B2505 14.413 148.091 120.392 1.00 67.70 C
ATOM 8 O4' A B2505 15.205 148.928 121.265 1.00 68.97 O
ATOM 9 C3' A B2505 15.344 147.769 119.228 1.00 71.10 C
ATOM 10 O3' A B2505 14.615 147.424 118.039 1.00 73.97 O
ATOM 11 C2' A B2505 16.169 149.044 119.069 1.00 71.55 C
ATOM 12 O2' A B2505 15.542 150.006 118.239 1.00 75.97 O
ATOM 13 C1' A B2505 16.214 149.571 120.508 1.00 71.13 C
ATOM 14 N9 A B2505 17.481 149.494 121.240 1.00 70.22 N
ATOM 15 C8 A B2505 17.868 148.584 122.196 1.00 68.75 C
ATOM 16 N7 A B2505 19.035 148.844 122.733 1.00 67.97 N
ATOM 17 C5 A B2505 19.457 149.990 122.073 1.00 69.28 C
ATOM 18 C6 A B2505 20.617 150.781 122.192 1.00 68.92 C
ATOM 19 N6 A B2505 21.596 150.531 123.062 1.00 68.82 N
ATOM 20 N1 A B2505 20.734 151.853 121.376 1.00 69.53 N
ATOM 21 C2 A B2505 19.747 152.107 120.505 1.00 70.29 C
ATOM 22 N3 A B2505 18.607 151.445 120.304 1.00 70.63 N
ATOM 23 C4 A B2505 18.521 150.386 121.132 1.00 70.09 C
TER
Atoms:
C4: (21.293,148.594,119.834)
N3: (21.858,147.976,120.918)
OP1: (15.692,144.292,116.952)
OP2: (17.043,146.463,116.724)
C2: (21.534,146.746,121.425)
C1': (20.085,144.785,121.327)
C3': (17.733,144.735,121.514)
O5': (17.470,144.865,118.595)
O4': (19.574,143.974,120.279)
C5': (17.426,143.590,119.249)
P: (16.974,145.027,117.091)
C4': (18.185,143.651,120.548)
C2': (18.971,144.931,122.369)
O2': (19.098,143.917,123.347)
N1: (20.521,146.078,120.767)
O4: (21.682,149.719,119.514)
O2: (22.110,146.286,122.368)
C6: (19.933,146.628,119.652)
C5: (20.279,147.828,119.172)
O3': (16.629,144.302,122.301)
N3: (21.858,147.976,120.918)
OP1: (15.692,144.292,116.952)
OP2: (17.043,146.463,116.724)
C2: (21.534,146.746,121.425)
C1': (20.085,144.785,121.327)
C3': (17.733,144.735,121.514)
O5': (17.470,144.865,118.595)
O4': (19.574,143.974,120.279)
C5': (17.426,143.590,119.249)
P: (16.974,145.027,117.091)
C4': (18.185,143.651,120.548)
C2': (18.971,144.931,122.369)
O2': (19.098,143.917,123.347)
N1: (20.521,146.078,120.767)
O4: (21.682,149.719,119.514)
O2: (22.110,146.286,122.368)
C6: (19.933,146.628,119.652)
C5: (20.279,147.828,119.172)
O3': (16.629,144.302,122.301)
OP1: (16.051,146.434,123.498)
OP2: (14.374,144.512,123.250)
C3': (15.344,147.769,119.228)
C1': (16.214,149.571,120.508)
C5': (13.929,146.885,121.168)
O4': (15.205,148.928,121.265)
C8: (17.868,148.584,122.196)
O2': (15.542,150.006,118.239)
C6: (20.617,150.781,122.192)
C5: (19.457,149.990,122.073)
C4: (18.521,150.386,121.132)
P: (15.463,145.340,122.688)
C4': (14.413,148.091,120.392)
C2': (16.169,149.044,119.069)
C2: (19.747,152.107,120.505)
N1: (20.734,151.853,121.376)
N3: (18.607,151.445,120.304)
N6: (21.596,150.531,123.062)
N7: (19.035,148.844,122.733)
N9: (17.481,149.494,121.240)
O5': (14.994,145.918,121.283)
O3': (14.615,147.424,118.039)
OP2: (14.374,144.512,123.250)
C3': (15.344,147.769,119.228)
C1': (16.214,149.571,120.508)
C5': (13.929,146.885,121.168)
O4': (15.205,148.928,121.265)
C8: (17.868,148.584,122.196)
O2': (15.542,150.006,118.239)
C6: (20.617,150.781,122.192)
C5: (19.457,149.990,122.073)
C4: (18.521,150.386,121.132)
P: (15.463,145.340,122.688)
C4': (14.413,148.091,120.392)
C2': (16.169,149.044,119.069)
C2: (19.747,152.107,120.505)
N1: (20.734,151.853,121.376)
N3: (18.607,151.445,120.304)
N6: (21.596,150.531,123.062)
N7: (19.035,148.844,122.733)
N9: (17.481,149.494,121.240)
O5': (14.994,145.918,121.283)
O3': (14.615,147.424,118.039)
Image (generated by PyMOL):