ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01070:0567

Extra

PDB:
ATOM 1 O3' G A1069 12.720 99.217 132.633 1.00 47.01 O
ATOM 2 P U A1070 13.315 98.746 134.048 1.00 47.99 P
ATOM 3 OP1 U A1070 12.471 99.391 135.086 1.00 49.52 O
ATOM 4 OP2 U A1070 14.778 98.974 134.065 1.00 52.83 O
ATOM 5 O5' U A1070 13.100 97.170 134.030 1.00 48.49 O
ATOM 6 C5' U A1070 11.778 96.608 133.912 1.00 50.98 C
ATOM 7 C4' U A1070 11.855 95.103 133.826 1.00 52.27 C
ATOM 8 O4' U A1070 12.532 94.723 132.602 1.00 53.06 O
ATOM 9 C3' U A1070 12.670 94.415 134.907 1.00 52.94 C
ATOM 10 O3' U A1070 11.936 94.267 136.112 1.00 55.14 O
ATOM 11 C2' U A1070 12.988 93.079 134.257 1.00 54.60 C
ATOM 12 O2' U A1070 11.883 92.195 134.277 1.00 56.03 O
ATOM 13 C1' U A1070 13.246 93.511 132.812 1.00 53.79 C
ATOM 14 N1 U A1070 14.668 93.724 132.491 1.00 52.46 N
ATOM 15 C2 U A1070 15.451 92.602 132.238 1.00 53.00 C
ATOM 16 O2 U A1070 15.025 91.463 132.294 1.00 55.11 O
ATOM 17 N3 U A1070 16.756 92.865 131.914 1.00 51.76 N
ATOM 18 C4 U A1070 17.354 94.098 131.826 1.00 51.32 C
ATOM 19 O4 U A1070 18.540 94.165 131.517 1.00 51.41 O
ATOM 20 C5 U A1070 16.495 95.207 132.116 1.00 50.52 C
ATOM 21 C6 U A1070 15.215 94.989 132.430 1.00 51.96 C
ATOM 22 P G A1071 12.708 94.296 137.527 1.00 55.49 P
ATOM 23 OP1 G A1071 11.634 94.281 138.560 1.00 55.52 O
ATOM 24 OP2 G A1071 13.710 95.391 137.530 1.00 54.23 O
ATOM 25 O5' G A1071 13.471 92.897 137.564 1.00 53.02 O
TER

ATOM 1 O3' C B 566 5.975 87.810 138.683 1.00 63.86 O
ATOM 2 P G B 567 5.091 88.335 137.447 1.00 63.72 P
ATOM 3 OP1 G B 567 3.872 88.994 138.000 1.00 61.86 O
ATOM 4 OP2 G B 567 4.953 87.203 136.481 1.00 61.95 O
ATOM 5 O5' G B 567 5.986 89.475 136.783 1.00 63.23 O
ATOM 6 C5' G B 567 6.353 90.661 137.522 1.00 60.32 C
ATOM 7 C4' G B 567 7.465 91.398 136.806 1.00 59.62 C
ATOM 8 O4' G B 567 8.618 90.524 136.706 1.00 58.32 O
ATOM 9 C3' G B 567 7.166 91.822 135.373 1.00 58.36 C
ATOM 10 O3' G B 567 6.526 93.103 135.380 1.00 55.92 O
ATOM 11 C2' G B 567 8.556 91.873 134.747 1.00 57.56 C
ATOM 12 O2' G B 567 9.256 93.051 135.092 1.00 59.50 O
ATOM 13 C1' G B 567 9.258 90.719 135.463 1.00 56.70 C
ATOM 14 N9 G B 567 9.304 89.434 134.775 1.00 55.11 N
ATOM 15 C8 G B 567 8.283 88.530 134.625 1.00 54.09 C
ATOM 16 N7 G B 567 8.661 87.426 134.037 1.00 54.22 N
ATOM 17 C5 G B 567 10.008 87.619 133.766 1.00 52.21 C
ATOM 18 C6 G B 567 10.962 86.757 133.151 1.00 51.94 C
ATOM 19 O6 G B 567 10.801 85.611 132.715 1.00 50.26 O
ATOM 20 N1 G B 567 12.215 87.355 133.073 1.00 51.56 N
ATOM 21 C2 G B 567 12.517 88.617 133.524 1.00 53.69 C
ATOM 22 N2 G B 567 13.786 89.022 133.356 1.00 53.19 N
ATOM 23 N3 G B 567 11.642 89.426 134.101 1.00 54.00 N
ATOM 24 C4 G B 567 10.415 88.863 134.192 1.00 53.95 C
ATOM 25 P A B 568 5.522 93.511 134.195 1.00 56.56 P
ATOM 26 OP1 A B 568 4.760 94.691 134.673 1.00 55.37 O
ATOM 27 OP2 A B 568 4.791 92.308 133.711 1.00 55.17 O
ATOM 28 O5' A B 568 6.476 93.990 133.012 1.00 57.73 O
TER

Atoms:
C4: (17.354,94.098,131.826)
N3: (16.756,92.865,131.914)
OP1: (12.471,99.391,135.086)
OP2: (14.778,98.974,134.065)
C2: (15.451,92.602,132.238)
C1': (13.246,93.511,132.812)
C3': (12.670,94.415,134.907)
O5': (13.100,97.170,134.030)
O4': (12.532,94.723,132.602)
C5': (11.778,96.608,133.912)
P: (13.315,98.746,134.048)
C4': (11.855,95.103,133.826)
C2': (12.988,93.079,134.257)
O2': (11.883,92.195,134.277)
N1: (14.668,93.724,132.491)
O4: (18.540,94.165,131.517)
O2: (15.025,91.463,132.294)
C6: (15.215,94.989,132.430)
C5: (16.495,95.207,132.116)
O3': (11.936,94.267,136.112)
OP1: (3.872,88.994,138.000)
OP2: (4.953,87.203,136.481)
C3': (7.166,91.822,135.373)
C1': (9.258,90.719,135.463)
C5': (6.353,90.661,137.522)
O6: (10.801,85.611,132.715)
O4': (8.618,90.524,136.706)
C8: (8.283,88.530,134.625)
C2: (12.517,88.617,133.524)
C6: (10.962,86.757,133.151)
C5: (10.008,87.619,133.766)
C4: (10.415,88.863,134.192)
P: (5.091,88.335,137.447)
C4': (7.465,91.398,136.806)
C2': (8.556,91.873,134.747)
O2': (9.256,93.051,135.092)
N1: (12.215,87.355,133.073)
N2: (13.786,89.022,133.356)
N3: (11.642,89.426,134.101)
N7: (8.661,87.426,134.037)
N9: (9.304,89.434,134.775)
O5': (5.986,89.475,136.783)
O3': (6.526,93.103,135.380)
Image (generated by PyMOL):
PyMOL image
show in jmol