Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1816:A1829
Extra
PDB:
ATOM 1 O3' A A1815 115.263 123.598 52.260 1.00 56.88 O
ATOM 2 P A A1816 114.284 123.965 53.491 1.00 54.64 P
ATOM 3 OP1 A A1816 113.131 123.010 53.495 1.00 54.75 O
ATOM 4 OP2 A A1816 114.026 125.415 53.390 1.00 54.99 O
ATOM 5 O5' A A1816 115.158 123.705 54.793 1.00 51.68 O
ATOM 6 C5' A A1816 115.962 122.520 54.928 1.00 47.94 C
ATOM 7 C4' A A1816 116.456 122.393 56.352 1.00 45.56 C
ATOM 8 O4' A A1816 117.199 123.582 56.688 1.00 45.44 O
ATOM 9 C3' A A1816 115.371 122.336 57.414 1.00 44.76 C
ATOM 10 O3' A A1816 114.919 121.009 57.604 1.00 43.18 O
ATOM 11 C2' A A1816 116.078 122.853 58.654 1.00 44.44 C
ATOM 12 O2' A A1816 116.897 121.890 59.273 1.00 45.76 O
ATOM 13 C1' A A1816 116.978 123.918 58.047 1.00 45.20 C
ATOM 14 N9 A A1816 116.365 125.242 58.118 1.00 45.72 N
ATOM 15 C8 A A1816 115.809 126.012 57.123 1.00 46.05 C
ATOM 16 N7 A A1816 115.347 127.158 57.547 1.00 45.52 N
ATOM 17 C5 A A1816 115.611 127.141 58.908 1.00 44.81 C
ATOM 18 C6 A A1816 115.369 128.065 59.918 1.00 44.86 C
ATOM 19 N6 A A1816 114.761 129.233 59.714 1.00 45.47 N
ATOM 20 N1 A A1816 115.771 127.750 61.169 1.00 45.47 N
ATOM 21 C2 A A1816 116.370 126.572 61.372 1.00 44.81 C
ATOM 22 N3 A A1816 116.645 125.618 60.500 1.00 44.34 N
ATOM 23 C4 A A1816 116.238 125.971 59.272 1.00 44.93 C
ATOM 24 P A A1817 113.434 120.752 58.128 1.00 42.48 P
ATOM 25 OP1 A A1817 113.272 119.289 58.097 1.00 43.87 O
ATOM 26 OP2 A A1817 112.509 121.621 57.345 1.00 41.90 O
ATOM 27 O5' A A1817 113.473 121.176 59.659 1.00 41.53 O
TER
ATOM 1 O3' C B1828 109.777 135.602 62.238 1.00 46.37 O
ATOM 2 P U B1829 111.059 136.509 61.882 1.00 47.58 P
ATOM 3 OP1 U B1829 112.257 135.645 61.714 1.00 45.72 O
ATOM 4 OP2 U B1829 111.083 137.622 62.877 1.00 47.64 O
ATOM 5 O5' U B1829 110.709 137.113 60.453 1.00 46.47 O
ATOM 6 C5' U B1829 111.529 138.123 59.880 1.00 46.05 C
ATOM 7 C4' U B1829 111.676 137.901 58.399 1.00 45.18 C
ATOM 8 O4' U B1829 112.463 136.709 58.168 1.00 44.30 O
ATOM 9 C3' U B1829 110.395 137.721 57.588 1.00 45.19 C
ATOM 10 O3' U B1829 110.588 138.284 56.309 1.00 45.75 O
ATOM 11 C2' U B1829 110.343 136.218 57.355 1.00 45.78 C
ATOM 12 O2' U B1829 109.647 135.923 56.159 1.00 45.48 O
ATOM 13 C1' U B1829 111.830 135.912 57.192 1.00 45.62 C
ATOM 14 N1 U B1829 112.232 134.511 57.399 1.00 47.11 N
ATOM 15 C2 U B1829 112.356 133.705 56.282 1.00 46.73 C
ATOM 16 O2 U B1829 112.128 134.098 55.153 1.00 48.51 O
ATOM 17 N3 U B1829 112.747 132.415 56.537 1.00 46.14 N
ATOM 18 C4 U B1829 113.009 131.843 57.768 1.00 47.42 C
ATOM 19 O4 U B1829 113.257 130.637 57.834 1.00 48.31 O
ATOM 20 C5 U B1829 112.862 132.728 58.880 1.00 47.42 C
ATOM 21 C6 U B1829 112.487 134.003 58.668 1.00 48.40 C
ATOM 22 P C B1830 110.489 139.871 56.109 1.00 46.99 P
ATOM 23 OP1 C B1830 109.969 140.516 57.352 1.00 45.31 O
ATOM 24 OP2 C B1830 109.777 140.074 54.810 1.00 44.18 O
ATOM 25 O5' C B1830 112.015 140.332 55.991 1.00 49.73 O
TER
ATOM 2 P A A1816 114.284 123.965 53.491 1.00 54.64 P
ATOM 3 OP1 A A1816 113.131 123.010 53.495 1.00 54.75 O
ATOM 4 OP2 A A1816 114.026 125.415 53.390 1.00 54.99 O
ATOM 5 O5' A A1816 115.158 123.705 54.793 1.00 51.68 O
ATOM 6 C5' A A1816 115.962 122.520 54.928 1.00 47.94 C
ATOM 7 C4' A A1816 116.456 122.393 56.352 1.00 45.56 C
ATOM 8 O4' A A1816 117.199 123.582 56.688 1.00 45.44 O
ATOM 9 C3' A A1816 115.371 122.336 57.414 1.00 44.76 C
ATOM 10 O3' A A1816 114.919 121.009 57.604 1.00 43.18 O
ATOM 11 C2' A A1816 116.078 122.853 58.654 1.00 44.44 C
ATOM 12 O2' A A1816 116.897 121.890 59.273 1.00 45.76 O
ATOM 13 C1' A A1816 116.978 123.918 58.047 1.00 45.20 C
ATOM 14 N9 A A1816 116.365 125.242 58.118 1.00 45.72 N
ATOM 15 C8 A A1816 115.809 126.012 57.123 1.00 46.05 C
ATOM 16 N7 A A1816 115.347 127.158 57.547 1.00 45.52 N
ATOM 17 C5 A A1816 115.611 127.141 58.908 1.00 44.81 C
ATOM 18 C6 A A1816 115.369 128.065 59.918 1.00 44.86 C
ATOM 19 N6 A A1816 114.761 129.233 59.714 1.00 45.47 N
ATOM 20 N1 A A1816 115.771 127.750 61.169 1.00 45.47 N
ATOM 21 C2 A A1816 116.370 126.572 61.372 1.00 44.81 C
ATOM 22 N3 A A1816 116.645 125.618 60.500 1.00 44.34 N
ATOM 23 C4 A A1816 116.238 125.971 59.272 1.00 44.93 C
ATOM 24 P A A1817 113.434 120.752 58.128 1.00 42.48 P
ATOM 25 OP1 A A1817 113.272 119.289 58.097 1.00 43.87 O
ATOM 26 OP2 A A1817 112.509 121.621 57.345 1.00 41.90 O
ATOM 27 O5' A A1817 113.473 121.176 59.659 1.00 41.53 O
TER
ATOM 1 O3' C B1828 109.777 135.602 62.238 1.00 46.37 O
ATOM 2 P U B1829 111.059 136.509 61.882 1.00 47.58 P
ATOM 3 OP1 U B1829 112.257 135.645 61.714 1.00 45.72 O
ATOM 4 OP2 U B1829 111.083 137.622 62.877 1.00 47.64 O
ATOM 5 O5' U B1829 110.709 137.113 60.453 1.00 46.47 O
ATOM 6 C5' U B1829 111.529 138.123 59.880 1.00 46.05 C
ATOM 7 C4' U B1829 111.676 137.901 58.399 1.00 45.18 C
ATOM 8 O4' U B1829 112.463 136.709 58.168 1.00 44.30 O
ATOM 9 C3' U B1829 110.395 137.721 57.588 1.00 45.19 C
ATOM 10 O3' U B1829 110.588 138.284 56.309 1.00 45.75 O
ATOM 11 C2' U B1829 110.343 136.218 57.355 1.00 45.78 C
ATOM 12 O2' U B1829 109.647 135.923 56.159 1.00 45.48 O
ATOM 13 C1' U B1829 111.830 135.912 57.192 1.00 45.62 C
ATOM 14 N1 U B1829 112.232 134.511 57.399 1.00 47.11 N
ATOM 15 C2 U B1829 112.356 133.705 56.282 1.00 46.73 C
ATOM 16 O2 U B1829 112.128 134.098 55.153 1.00 48.51 O
ATOM 17 N3 U B1829 112.747 132.415 56.537 1.00 46.14 N
ATOM 18 C4 U B1829 113.009 131.843 57.768 1.00 47.42 C
ATOM 19 O4 U B1829 113.257 130.637 57.834 1.00 48.31 O
ATOM 20 C5 U B1829 112.862 132.728 58.880 1.00 47.42 C
ATOM 21 C6 U B1829 112.487 134.003 58.668 1.00 48.40 C
ATOM 22 P C B1830 110.489 139.871 56.109 1.00 46.99 P
ATOM 23 OP1 C B1830 109.969 140.516 57.352 1.00 45.31 O
ATOM 24 OP2 C B1830 109.777 140.074 54.810 1.00 44.18 O
ATOM 25 O5' C B1830 112.015 140.332 55.991 1.00 49.73 O
TER
Atoms:
OP1: (113.131,123.010,53.495)
OP2: (114.026,125.415,53.390)
C3': (115.371,122.336,57.414)
C1': (116.978,123.918,58.047)
C5': (115.962,122.520,54.928)
O4': (117.199,123.582,56.688)
C8: (115.809,126.012,57.123)
O2': (116.897,121.890,59.273)
C6: (115.369,128.065,59.918)
C5: (115.611,127.141,58.908)
C4: (116.238,125.971,59.272)
P: (114.284,123.965,53.491)
C4': (116.456,122.393,56.352)
C2': (116.078,122.853,58.654)
C2: (116.370,126.572,61.372)
N1: (115.771,127.750,61.169)
N3: (116.645,125.618,60.500)
N6: (114.761,129.233,59.714)
N7: (115.347,127.158,57.547)
N9: (116.365,125.242,58.118)
O5': (115.158,123.705,54.793)
O3': (114.919,121.009,57.604)
OP2: (114.026,125.415,53.390)
C3': (115.371,122.336,57.414)
C1': (116.978,123.918,58.047)
C5': (115.962,122.520,54.928)
O4': (117.199,123.582,56.688)
C8: (115.809,126.012,57.123)
O2': (116.897,121.890,59.273)
C6: (115.369,128.065,59.918)
C5: (115.611,127.141,58.908)
C4: (116.238,125.971,59.272)
P: (114.284,123.965,53.491)
C4': (116.456,122.393,56.352)
C2': (116.078,122.853,58.654)
C2: (116.370,126.572,61.372)
N1: (115.771,127.750,61.169)
N3: (116.645,125.618,60.500)
N6: (114.761,129.233,59.714)
N7: (115.347,127.158,57.547)
N9: (116.365,125.242,58.118)
O5': (115.158,123.705,54.793)
O3': (114.919,121.009,57.604)
C4: (113.009,131.843,57.768)
N3: (112.747,132.415,56.537)
OP1: (112.257,135.645,61.714)
OP2: (111.083,137.622,62.877)
C2: (112.356,133.705,56.282)
C1': (111.830,135.912,57.192)
C3': (110.395,137.721,57.588)
O5': (110.709,137.113,60.453)
O4': (112.463,136.709,58.168)
C5': (111.529,138.123,59.880)
P: (111.059,136.509,61.882)
C4': (111.676,137.901,58.399)
C2': (110.343,136.218,57.355)
O2': (109.647,135.923,56.159)
N1: (112.232,134.511,57.399)
O4: (113.257,130.637,57.834)
O2: (112.128,134.098,55.153)
C6: (112.487,134.003,58.668)
C5: (112.862,132.728,58.880)
O3': (110.588,138.284,56.309)
N3: (112.747,132.415,56.537)
OP1: (112.257,135.645,61.714)
OP2: (111.083,137.622,62.877)
C2: (112.356,133.705,56.282)
C1': (111.830,135.912,57.192)
C3': (110.395,137.721,57.588)
O5': (110.709,137.113,60.453)
O4': (112.463,136.709,58.168)
C5': (111.529,138.123,59.880)
P: (111.059,136.509,61.882)
C4': (111.676,137.901,58.399)
C2': (110.343,136.218,57.355)
O2': (109.647,135.923,56.159)
N1: (112.232,134.511,57.399)
O4: (113.257,130.637,57.834)
O2: (112.128,134.098,55.153)
C6: (112.487,134.003,58.668)
C5: (112.862,132.728,58.880)
O3': (110.588,138.284,56.309)
Image (generated by PyMOL):