ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:02106:02079

Extra

PDB:
ATOM 1 O3' C A2105 116.016 109.600 45.551 1.00 68.17 O
ATOM 2 P A A2106 114.512 109.978 45.974 1.00 68.26 P
ATOM 3 OP1 A A2106 114.311 109.453 47.352 1.00 69.63 O
ATOM 4 OP2 A A2106 113.600 109.537 44.881 1.00 67.22 O
ATOM 5 O5' A A2106 114.516 111.573 46.042 1.00 64.54 O
ATOM 6 C5' A A2106 115.172 112.264 47.125 1.00 60.95 C
ATOM 7 C4' A A2106 115.047 113.761 46.953 1.00 59.57 C
ATOM 8 O4' A A2106 115.762 114.166 45.761 1.00 59.15 O
ATOM 9 C3' A A2106 113.637 114.284 46.738 1.00 60.55 C
ATOM 10 O3' A A2106 112.937 114.456 47.962 1.00 61.73 O
ATOM 11 C2' A A2106 113.887 115.596 46.009 1.00 58.90 C
ATOM 12 O2' A A2106 114.286 116.639 46.874 1.00 59.27 O
ATOM 13 C1' A A2106 115.053 115.204 45.101 1.00 56.53 C
ATOM 14 N9 A A2106 114.604 114.679 43.813 1.00 53.43 N
ATOM 15 C8 A A2106 114.560 113.360 43.418 1.00 52.91 C
ATOM 16 N7 A A2106 114.104 113.186 42.203 1.00 51.91 N
ATOM 17 C5 A A2106 113.827 114.474 41.766 1.00 50.73 C
ATOM 18 C6 A A2106 113.318 114.966 40.557 1.00 49.51 C
ATOM 19 N6 A A2106 112.988 114.183 39.528 1.00 47.81 N
ATOM 20 N1 A A2106 113.159 116.304 40.438 1.00 48.57 N
ATOM 21 C2 A A2106 113.495 117.082 41.474 1.00 49.66 C
ATOM 22 N3 A A2106 113.986 116.736 42.666 1.00 50.88 N
ATOM 23 C4 A A2106 114.131 115.403 42.747 1.00 51.54 C
ATOM 24 P C A2107 111.352 114.183 48.017 1.00 62.30 P
ATOM 25 OP1 C A2107 110.931 114.518 49.404 1.00 61.89 O
ATOM 26 OP2 C A2107 111.059 112.835 47.459 1.00 59.00 O
ATOM 27 O5' C A2107 110.743 115.269 47.026 1.00 58.69 O
TER

ATOM 1 O3' C B2078 109.697 111.435 32.089 1.00 61.25 O
ATOM 2 P U B2079 111.181 111.575 31.483 1.00 63.55 P
ATOM 3 OP1 U B2079 111.774 112.811 32.055 1.00 61.67 O
ATOM 4 OP2 U B2079 111.065 111.436 30.001 1.00 63.25 O
ATOM 5 O5' U B2079 111.992 110.315 32.026 1.00 61.59 O
ATOM 6 C5' U B2079 113.211 109.911 31.378 1.00 63.65 C
ATOM 7 C4' U B2079 113.818 108.724 32.078 1.00 65.48 C
ATOM 8 O4' U B2079 114.360 109.130 33.363 1.00 65.60 O
ATOM 9 C3' U B2079 112.869 107.568 32.360 1.00 68.16 C
ATOM 10 O3' U B2079 113.604 106.351 32.290 1.00 73.27 O
ATOM 11 C2' U B2079 112.458 107.836 33.809 1.00 67.16 C
ATOM 12 O2' U B2079 112.039 106.679 34.507 1.00 66.73 O
ATOM 13 C1' U B2079 113.769 108.357 34.388 1.00 64.70 C
ATOM 14 N1 U B2079 113.656 109.189 35.595 1.00 61.81 N
ATOM 15 C2 U B2079 114.186 108.681 36.762 1.00 61.28 C
ATOM 16 O2 U B2079 114.649 107.555 36.847 1.00 62.18 O
ATOM 17 N3 U B2079 114.154 109.535 37.835 1.00 60.72 N
ATOM 18 C4 U B2079 113.630 110.805 37.870 1.00 60.99 C
ATOM 19 O4 U B2079 113.695 111.452 38.915 1.00 63.20 O
ATOM 20 C5 U B2079 113.048 111.246 36.638 1.00 60.65 C
ATOM 21 C6 U B2079 113.079 110.441 35.568 1.00 61.54 C
ATOM 22 P G B2080 113.867 105.648 30.865 1.00 77.36 P
ATOM 23 OP1 G B2080 112.857 106.174 29.902 1.00 74.60 O
ATOM 24 OP2 G B2080 113.951 104.182 31.108 1.00 76.68 O
ATOM 25 O5' G B2080 115.325 106.169 30.457 1.00 79.46 O
TER

Atoms:
OP1: (114.311,109.453,47.352)
OP2: (113.600,109.537,44.881)
C3': (113.637,114.284,46.738)
C1': (115.053,115.204,45.101)
C5': (115.172,112.264,47.125)
O4': (115.762,114.166,45.761)
C8: (114.560,113.360,43.418)
O2': (114.286,116.639,46.874)
C6: (113.318,114.966,40.557)
C5: (113.827,114.474,41.766)
C4: (114.131,115.403,42.747)
P: (114.512,109.978,45.974)
C4': (115.047,113.761,46.953)
C2': (113.887,115.596,46.009)
C2: (113.495,117.082,41.474)
N1: (113.159,116.304,40.438)
N3: (113.986,116.736,42.666)
N6: (112.988,114.183,39.528)
N7: (114.104,113.186,42.203)
N9: (114.604,114.679,43.813)
O5': (114.516,111.573,46.042)
O3': (112.937,114.456,47.962)
C4: (113.630,110.805,37.870)
N3: (114.154,109.535,37.835)
OP1: (111.774,112.811,32.055)
OP2: (111.065,111.436,30.001)
C2: (114.186,108.681,36.762)
C1': (113.769,108.357,34.388)
C3': (112.869,107.568,32.360)
O5': (111.992,110.315,32.026)
O4': (114.360,109.130,33.363)
C5': (113.211,109.911,31.378)
P: (111.181,111.575,31.483)
C4': (113.818,108.724,32.078)
C2': (112.458,107.836,33.809)
O2': (112.039,106.679,34.507)
N1: (113.656,109.189,35.595)
O4: (113.695,111.452,38.915)
O2: (114.649,107.555,36.847)
C6: (113.079,110.441,35.568)
C5: (113.048,111.246,36.638)
O3': (113.604,106.351,32.290)
Image (generated by PyMOL):
PyMOL image
show in jmol