ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:01816:01829

Extra

PDB:
ATOM 1 O3' A A1815 114.674 123.647 52.133 1.00 60.99 O
ATOM 2 P A A1816 113.753 123.993 53.407 1.00 58.61 P
ATOM 3 OP1 A A1816 112.626 123.025 53.442 1.00 60.11 O
ATOM 4 OP2 A A1816 113.464 125.451 53.365 1.00 58.78 O
ATOM 5 O5' A A1816 114.682 123.691 54.666 1.00 55.00 O
ATOM 6 C5' A A1816 115.504 122.520 54.728 1.00 45.49 C
ATOM 7 C4' A A1816 116.071 122.368 56.118 1.00 43.53 C
ATOM 8 O4' A A1816 116.801 123.578 56.465 1.00 42.15 O
ATOM 9 C3' A A1816 115.046 122.224 57.231 1.00 42.68 C
ATOM 10 O3' A A1816 114.592 120.873 57.341 1.00 42.96 O
ATOM 11 C2' A A1816 115.828 122.711 58.450 1.00 41.65 C
ATOM 12 O2' A A1816 116.741 121.759 58.953 1.00 43.31 O
ATOM 13 C1' A A1816 116.638 123.861 57.850 1.00 40.10 C
ATOM 14 N9 A A1816 115.972 125.160 57.991 1.00 37.33 N
ATOM 15 C8 A A1816 115.310 125.880 57.024 1.00 36.57 C
ATOM 16 N7 A A1816 114.763 126.986 57.469 1.00 35.50 N
ATOM 17 C5 A A1816 115.092 127.000 58.815 1.00 33.35 C
ATOM 18 C6 A A1816 114.788 127.895 59.843 1.00 34.41 C
ATOM 19 N6 A A1816 114.055 128.999 59.666 1.00 36.86 N
ATOM 20 N1 A A1816 115.263 127.622 61.076 1.00 34.78 N
ATOM 21 C2 A A1816 116.004 126.524 61.245 1.00 34.79 C
ATOM 22 N3 A A1816 116.360 125.604 60.351 1.00 34.52 N
ATOM 23 C4 A A1816 115.858 125.898 59.144 1.00 34.10 C
ATOM 24 P A A1817 113.115 120.552 57.920 1.00 43.03 P
ATOM 25 OP1 A A1817 112.964 119.076 57.891 1.00 43.66 O
ATOM 26 OP2 A A1817 112.120 121.398 57.214 1.00 43.76 O
ATOM 27 O5' A A1817 113.166 121.009 59.443 1.00 36.92 O
TER

ATOM 1 O3' C B1828 109.370 135.680 62.139 1.00 39.34 O
ATOM 2 P U B1829 110.677 136.561 61.801 1.00 38.92 P
ATOM 3 OP1 U B1829 111.859 135.655 61.718 1.00 35.70 O
ATOM 4 OP2 U B1829 110.662 137.674 62.782 1.00 35.97 O
ATOM 5 O5' U B1829 110.396 137.122 60.339 1.00 35.81 O
ATOM 6 C5' U B1829 111.216 138.152 59.778 1.00 36.82 C
ATOM 7 C4' U B1829 111.400 137.933 58.296 1.00 34.97 C
ATOM 8 O4' U B1829 112.137 136.700 58.087 1.00 35.82 O
ATOM 9 C3' U B1829 110.122 137.794 57.476 1.00 36.78 C
ATOM 10 O3' U B1829 110.352 138.344 56.188 1.00 38.60 O
ATOM 11 C2' U B1829 110.002 136.278 57.326 1.00 38.31 C
ATOM 12 O2' U B1829 109.228 135.849 56.223 1.00 39.12 O
ATOM 13 C1' U B1829 111.467 135.918 57.125 1.00 36.12 C
ATOM 14 N1 U B1829 111.843 134.506 57.296 1.00 37.91 N
ATOM 15 C2 U B1829 111.986 133.744 56.151 1.00 37.24 C
ATOM 16 O2 U B1829 111.762 134.178 55.038 1.00 42.68 O
ATOM 17 N3 U B1829 112.400 132.452 56.355 1.00 35.91 N
ATOM 18 C4 U B1829 112.678 131.851 57.565 1.00 37.42 C
ATOM 19 O4 U B1829 113.079 130.684 57.585 1.00 36.68 O
ATOM 20 C5 U B1829 112.469 132.688 58.707 1.00 37.28 C
ATOM 21 C6 U B1829 112.068 133.956 58.539 1.00 38.18 C
ATOM 22 P C B1830 110.272 139.932 55.961 1.00 40.67 P
ATOM 23 OP1 C B1830 109.726 140.584 57.174 1.00 38.45 O
ATOM 24 OP2 C B1830 109.628 140.176 54.633 1.00 40.62 O
ATOM 25 O5' C B1830 111.801 140.358 55.856 1.00 43.58 O
TER

Atoms:
OP1: (112.626,123.025,53.442)
OP2: (113.464,125.451,53.365)
C3': (115.046,122.224,57.231)
C1': (116.638,123.861,57.850)
C5': (115.504,122.520,54.728)
O4': (116.801,123.578,56.465)
C8: (115.310,125.880,57.024)
O2': (116.741,121.759,58.953)
C6: (114.788,127.895,59.843)
C5: (115.092,127.000,58.815)
C4: (115.858,125.898,59.144)
P: (113.753,123.993,53.407)
C4': (116.071,122.368,56.118)
C2': (115.828,122.711,58.450)
C2: (116.004,126.524,61.245)
N1: (115.263,127.622,61.076)
N3: (116.360,125.604,60.351)
N6: (114.055,128.999,59.666)
N7: (114.763,126.986,57.469)
N9: (115.972,125.160,57.991)
O5': (114.682,123.691,54.666)
O3': (114.592,120.873,57.341)
C4: (112.678,131.851,57.565)
N3: (112.400,132.452,56.355)
OP1: (111.859,135.655,61.718)
OP2: (110.662,137.674,62.782)
C2: (111.986,133.744,56.151)
C1': (111.467,135.918,57.125)
C3': (110.122,137.794,57.476)
O5': (110.396,137.122,60.339)
O4': (112.137,136.700,58.087)
C5': (111.216,138.152,59.778)
P: (110.677,136.561,61.801)
C4': (111.400,137.933,58.296)
C2': (110.002,136.278,57.326)
O2': (109.228,135.849,56.223)
N1: (111.843,134.506,57.296)
O4: (113.079,130.684,57.585)
O2: (111.762,134.178,55.038)
C6: (112.068,133.956,58.539)
C5: (112.469,132.688,58.707)
O3': (110.352,138.344,56.188)
Image (generated by PyMOL):
PyMOL image
show in jmol