Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01816:01829
Extra
PDB:
ATOM 1 O3' A A1815 115.091 123.766 51.855 1.00 52.15 O
ATOM 2 P A A1816 114.192 124.105 53.137 1.00 51.42 P
ATOM 3 OP1 A A1816 113.080 123.124 53.160 1.00 52.72 O
ATOM 4 OP2 A A1816 113.886 125.563 53.108 1.00 51.59 O
ATOM 5 O5' A A1816 115.143 123.816 54.386 1.00 48.28 O
ATOM 6 C5' A A1816 115.860 122.577 54.522 1.00 39.94 C
ATOM 7 C4' A A1816 116.409 122.447 55.926 1.00 37.21 C
ATOM 8 O4' A A1816 117.118 123.674 56.264 1.00 35.63 O
ATOM 9 C3' A A1816 115.376 122.321 57.035 1.00 37.85 C
ATOM 10 O3' A A1816 114.908 120.982 57.177 1.00 38.85 O
ATOM 11 C2' A A1816 116.149 122.814 58.253 1.00 36.96 C
ATOM 12 O2' A A1816 117.058 121.866 58.775 1.00 36.90 O
ATOM 13 C1' A A1816 116.950 123.965 57.647 1.00 34.98 C
ATOM 14 N9 A A1816 116.261 125.250 57.780 1.00 32.27 N
ATOM 15 C8 A A1816 115.598 125.968 56.812 1.00 33.06 C
ATOM 16 N7 A A1816 115.062 127.082 57.254 1.00 32.66 N
ATOM 17 C5 A A1816 115.397 127.100 58.601 1.00 31.58 C
ATOM 18 C6 A A1816 115.117 128.013 59.631 1.00 33.82 C
ATOM 19 N6 A A1816 114.414 129.136 59.453 1.00 35.78 N
ATOM 20 N1 A A1816 115.589 127.732 60.867 1.00 35.46 N
ATOM 21 C2 A A1816 116.301 126.608 61.039 1.00 34.36 C
ATOM 22 N3 A A1816 116.632 125.675 60.148 1.00 31.20 N
ATOM 23 C4 A A1816 116.141 125.982 58.936 1.00 31.12 C
ATOM 24 P A A1817 113.414 120.704 57.720 1.00 39.13 P
ATOM 25 OP1 A A1817 113.227 119.231 57.713 1.00 39.43 O
ATOM 26 OP2 A A1817 112.455 121.567 56.977 1.00 38.60 O
ATOM 27 O5' A A1817 113.448 121.181 59.240 1.00 37.20 O
TER
ATOM 1 O3' C B1828 109.647 135.704 61.937 1.00 37.63 O
ATOM 2 P U B1829 110.933 136.607 61.599 1.00 35.20 P
ATOM 3 OP1 U B1829 112.110 135.705 61.534 1.00 35.50 O
ATOM 4 OP2 U B1829 110.934 137.751 62.541 1.00 32.25 O
ATOM 5 O5' U B1829 110.649 137.146 60.131 1.00 35.20 O
ATOM 6 C5' U B1829 111.472 138.173 59.561 1.00 36.27 C
ATOM 7 C4' U B1829 111.642 137.955 58.079 1.00 33.02 C
ATOM 8 O4' U B1829 112.394 136.733 57.860 1.00 32.78 O
ATOM 9 C3' U B1829 110.353 137.811 57.276 1.00 33.74 C
ATOM 10 O3' U B1829 110.551 138.384 55.993 1.00 37.43 O
ATOM 11 C2' U B1829 110.251 136.299 57.095 1.00 35.00 C
ATOM 12 O2' U B1829 109.495 135.921 55.963 1.00 34.46 O
ATOM 13 C1' U B1829 111.721 135.947 56.903 1.00 33.19 C
ATOM 14 N1 U B1829 112.099 134.534 57.074 1.00 34.01 N
ATOM 15 C2 U B1829 112.213 133.764 55.930 1.00 34.15 C
ATOM 16 O2 U B1829 111.995 134.202 54.814 1.00 38.66 O
ATOM 17 N3 U B1829 112.593 132.462 56.136 1.00 32.02 N
ATOM 18 C4 U B1829 112.869 131.857 57.339 1.00 32.14 C
ATOM 19 O4 U B1829 113.275 130.691 57.351 1.00 31.14 O
ATOM 20 C5 U B1829 112.715 132.707 58.479 1.00 33.37 C
ATOM 21 C6 U B1829 112.343 133.986 58.313 1.00 34.40 C
ATOM 22 P C B1830 110.494 139.979 55.801 1.00 37.25 P
ATOM 23 OP1 C B1830 109.922 140.593 57.028 1.00 37.50 O
ATOM 24 OP2 C B1830 109.865 140.246 54.477 1.00 35.34 O
ATOM 25 O5' C B1830 112.026 140.397 55.742 1.00 37.49 O
TER
ATOM 2 P A A1816 114.192 124.105 53.137 1.00 51.42 P
ATOM 3 OP1 A A1816 113.080 123.124 53.160 1.00 52.72 O
ATOM 4 OP2 A A1816 113.886 125.563 53.108 1.00 51.59 O
ATOM 5 O5' A A1816 115.143 123.816 54.386 1.00 48.28 O
ATOM 6 C5' A A1816 115.860 122.577 54.522 1.00 39.94 C
ATOM 7 C4' A A1816 116.409 122.447 55.926 1.00 37.21 C
ATOM 8 O4' A A1816 117.118 123.674 56.264 1.00 35.63 O
ATOM 9 C3' A A1816 115.376 122.321 57.035 1.00 37.85 C
ATOM 10 O3' A A1816 114.908 120.982 57.177 1.00 38.85 O
ATOM 11 C2' A A1816 116.149 122.814 58.253 1.00 36.96 C
ATOM 12 O2' A A1816 117.058 121.866 58.775 1.00 36.90 O
ATOM 13 C1' A A1816 116.950 123.965 57.647 1.00 34.98 C
ATOM 14 N9 A A1816 116.261 125.250 57.780 1.00 32.27 N
ATOM 15 C8 A A1816 115.598 125.968 56.812 1.00 33.06 C
ATOM 16 N7 A A1816 115.062 127.082 57.254 1.00 32.66 N
ATOM 17 C5 A A1816 115.397 127.100 58.601 1.00 31.58 C
ATOM 18 C6 A A1816 115.117 128.013 59.631 1.00 33.82 C
ATOM 19 N6 A A1816 114.414 129.136 59.453 1.00 35.78 N
ATOM 20 N1 A A1816 115.589 127.732 60.867 1.00 35.46 N
ATOM 21 C2 A A1816 116.301 126.608 61.039 1.00 34.36 C
ATOM 22 N3 A A1816 116.632 125.675 60.148 1.00 31.20 N
ATOM 23 C4 A A1816 116.141 125.982 58.936 1.00 31.12 C
ATOM 24 P A A1817 113.414 120.704 57.720 1.00 39.13 P
ATOM 25 OP1 A A1817 113.227 119.231 57.713 1.00 39.43 O
ATOM 26 OP2 A A1817 112.455 121.567 56.977 1.00 38.60 O
ATOM 27 O5' A A1817 113.448 121.181 59.240 1.00 37.20 O
TER
ATOM 1 O3' C B1828 109.647 135.704 61.937 1.00 37.63 O
ATOM 2 P U B1829 110.933 136.607 61.599 1.00 35.20 P
ATOM 3 OP1 U B1829 112.110 135.705 61.534 1.00 35.50 O
ATOM 4 OP2 U B1829 110.934 137.751 62.541 1.00 32.25 O
ATOM 5 O5' U B1829 110.649 137.146 60.131 1.00 35.20 O
ATOM 6 C5' U B1829 111.472 138.173 59.561 1.00 36.27 C
ATOM 7 C4' U B1829 111.642 137.955 58.079 1.00 33.02 C
ATOM 8 O4' U B1829 112.394 136.733 57.860 1.00 32.78 O
ATOM 9 C3' U B1829 110.353 137.811 57.276 1.00 33.74 C
ATOM 10 O3' U B1829 110.551 138.384 55.993 1.00 37.43 O
ATOM 11 C2' U B1829 110.251 136.299 57.095 1.00 35.00 C
ATOM 12 O2' U B1829 109.495 135.921 55.963 1.00 34.46 O
ATOM 13 C1' U B1829 111.721 135.947 56.903 1.00 33.19 C
ATOM 14 N1 U B1829 112.099 134.534 57.074 1.00 34.01 N
ATOM 15 C2 U B1829 112.213 133.764 55.930 1.00 34.15 C
ATOM 16 O2 U B1829 111.995 134.202 54.814 1.00 38.66 O
ATOM 17 N3 U B1829 112.593 132.462 56.136 1.00 32.02 N
ATOM 18 C4 U B1829 112.869 131.857 57.339 1.00 32.14 C
ATOM 19 O4 U B1829 113.275 130.691 57.351 1.00 31.14 O
ATOM 20 C5 U B1829 112.715 132.707 58.479 1.00 33.37 C
ATOM 21 C6 U B1829 112.343 133.986 58.313 1.00 34.40 C
ATOM 22 P C B1830 110.494 139.979 55.801 1.00 37.25 P
ATOM 23 OP1 C B1830 109.922 140.593 57.028 1.00 37.50 O
ATOM 24 OP2 C B1830 109.865 140.246 54.477 1.00 35.34 O
ATOM 25 O5' C B1830 112.026 140.397 55.742 1.00 37.49 O
TER
Atoms:
OP1: (113.080,123.124,53.160)
OP2: (113.886,125.563,53.108)
C3': (115.376,122.321,57.035)
C1': (116.950,123.965,57.647)
C5': (115.860,122.577,54.522)
O4': (117.118,123.674,56.264)
C8: (115.598,125.968,56.812)
O2': (117.058,121.866,58.775)
C6: (115.117,128.013,59.631)
C5: (115.397,127.100,58.601)
C4: (116.141,125.982,58.936)
P: (114.192,124.105,53.137)
C4': (116.409,122.447,55.926)
C2': (116.149,122.814,58.253)
C2: (116.301,126.608,61.039)
N1: (115.589,127.732,60.867)
N3: (116.632,125.675,60.148)
N6: (114.414,129.136,59.453)
N7: (115.062,127.082,57.254)
N9: (116.261,125.250,57.780)
O5': (115.143,123.816,54.386)
O3': (114.908,120.982,57.177)
OP2: (113.886,125.563,53.108)
C3': (115.376,122.321,57.035)
C1': (116.950,123.965,57.647)
C5': (115.860,122.577,54.522)
O4': (117.118,123.674,56.264)
C8: (115.598,125.968,56.812)
O2': (117.058,121.866,58.775)
C6: (115.117,128.013,59.631)
C5: (115.397,127.100,58.601)
C4: (116.141,125.982,58.936)
P: (114.192,124.105,53.137)
C4': (116.409,122.447,55.926)
C2': (116.149,122.814,58.253)
C2: (116.301,126.608,61.039)
N1: (115.589,127.732,60.867)
N3: (116.632,125.675,60.148)
N6: (114.414,129.136,59.453)
N7: (115.062,127.082,57.254)
N9: (116.261,125.250,57.780)
O5': (115.143,123.816,54.386)
O3': (114.908,120.982,57.177)
C4: (112.869,131.857,57.339)
N3: (112.593,132.462,56.136)
OP1: (112.110,135.705,61.534)
OP2: (110.934,137.751,62.541)
C2: (112.213,133.764,55.930)
C1': (111.721,135.947,56.903)
C3': (110.353,137.811,57.276)
O5': (110.649,137.146,60.131)
O4': (112.394,136.733,57.860)
C5': (111.472,138.173,59.561)
P: (110.933,136.607,61.599)
C4': (111.642,137.955,58.079)
C2': (110.251,136.299,57.095)
O2': (109.495,135.921,55.963)
N1: (112.099,134.534,57.074)
O4: (113.275,130.691,57.351)
O2: (111.995,134.202,54.814)
C6: (112.343,133.986,58.313)
C5: (112.715,132.707,58.479)
O3': (110.551,138.384,55.993)
N3: (112.593,132.462,56.136)
OP1: (112.110,135.705,61.534)
OP2: (110.934,137.751,62.541)
C2: (112.213,133.764,55.930)
C1': (111.721,135.947,56.903)
C3': (110.353,137.811,57.276)
O5': (110.649,137.146,60.131)
O4': (112.394,136.733,57.860)
C5': (111.472,138.173,59.561)
P: (110.933,136.607,61.599)
C4': (111.642,137.955,58.079)
C2': (110.251,136.299,57.095)
O2': (109.495,135.921,55.963)
N1: (112.099,134.534,57.074)
O4: (113.275,130.691,57.351)
O2: (111.995,134.202,54.814)
C6: (112.343,133.986,58.313)
C5: (112.715,132.707,58.479)
O3': (110.551,138.384,55.993)
Image (generated by PyMOL):