Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02106:02079
Extra
PDB:
ATOM 1 O3' C A2105 115.865 108.944 45.215 1.00 57.79 O
ATOM 2 P A A2106 114.373 109.363 45.646 1.00 57.73 P
ATOM 3 OP1 A A2106 114.171 108.866 47.031 1.00 58.75 O
ATOM 4 OP2 A A2106 113.436 108.939 44.568 1.00 56.26 O
ATOM 5 O5' A A2106 114.413 110.955 45.701 1.00 53.34 O
ATOM 6 C5' A A2106 115.026 111.633 46.807 1.00 50.48 C
ATOM 7 C4' A A2106 114.915 113.126 46.632 1.00 48.59 C
ATOM 8 O4' A A2106 115.628 113.515 45.433 1.00 48.57 O
ATOM 9 C3' A A2106 113.513 113.658 46.408 1.00 48.46 C
ATOM 10 O3' A A2106 112.812 113.847 47.619 1.00 50.11 O
ATOM 11 C2' A A2106 113.781 114.971 45.702 1.00 47.38 C
ATOM 12 O2' A A2106 114.213 115.966 46.607 1.00 47.31 O
ATOM 13 C1' A A2106 114.928 114.562 44.779 1.00 46.16 C
ATOM 14 N9 A A2106 114.443 114.043 43.501 1.00 43.01 N
ATOM 15 C8 A A2106 114.356 112.730 43.092 1.00 42.12 C
ATOM 16 N7 A A2106 113.870 112.583 41.884 1.00 40.29 N
ATOM 17 C5 A A2106 113.621 113.884 41.469 1.00 40.87 C
ATOM 18 C6 A A2106 113.109 114.408 40.276 1.00 41.02 C
ATOM 19 N6 A A2106 112.744 113.653 39.234 1.00 40.61 N
ATOM 20 N1 A A2106 112.984 115.752 40.183 1.00 40.76 N
ATOM 21 C2 A A2106 113.356 116.504 41.226 1.00 40.93 C
ATOM 22 N3 A A2106 113.859 116.128 42.399 1.00 41.05 N
ATOM 23 C4 A A2106 113.968 114.791 42.455 1.00 41.25 C
ATOM 24 P C A2107 111.250 113.491 47.687 1.00 50.82 P
ATOM 25 OP1 C A2107 110.845 113.708 49.099 1.00 50.41 O
ATOM 26 OP2 C A2107 111.036 112.161 47.049 1.00 50.16 O
ATOM 27 O5' C A2107 110.560 114.587 46.763 1.00 47.64 O
TER
ATOM 1 O3' C B2078 109.526 110.870 31.895 1.00 54.45 O
ATOM 2 P U B2079 111.001 110.950 31.255 1.00 57.40 P
ATOM 3 OP1 U B2079 111.715 112.082 31.902 1.00 56.92 O
ATOM 4 OP2 U B2079 110.860 110.919 29.772 1.00 55.44 O
ATOM 5 O5' U B2079 111.724 109.604 31.689 1.00 55.36 O
ATOM 6 C5' U B2079 112.904 109.174 31.002 1.00 55.72 C
ATOM 7 C4' U B2079 113.497 107.978 31.687 1.00 56.41 C
ATOM 8 O4' U B2079 114.066 108.378 32.961 1.00 54.53 O
ATOM 9 C3' U B2079 112.515 106.854 31.992 1.00 58.39 C
ATOM 10 O3' U B2079 113.211 105.613 31.927 1.00 63.44 O
ATOM 11 C2' U B2079 112.138 107.149 33.443 1.00 57.01 C
ATOM 12 O2' U B2079 111.689 106.014 34.156 1.00 57.39 O
ATOM 13 C1' U B2079 113.479 107.621 33.992 1.00 53.38 C
ATOM 14 N1 U B2079 113.430 108.445 35.206 1.00 50.41 N
ATOM 15 C2 U B2079 113.837 107.854 36.381 1.00 50.33 C
ATOM 16 O2 U B2079 114.161 106.679 36.454 1.00 51.07 O
ATOM 17 N3 U B2079 113.847 108.682 37.473 1.00 50.17 N
ATOM 18 C4 U B2079 113.482 110.007 37.512 1.00 50.48 C
ATOM 19 O4 U B2079 113.622 110.639 38.561 1.00 51.60 O
ATOM 20 C5 U B2079 113.032 110.538 36.261 1.00 50.03 C
ATOM 21 C6 U B2079 113.022 109.758 35.177 1.00 50.43 C
ATOM 22 P G B2080 113.658 105.014 30.504 1.00 65.75 P
ATOM 23 OP1 G B2080 112.662 105.476 29.493 1.00 65.13 O
ATOM 24 OP2 G B2080 113.881 103.558 30.700 1.00 66.34 O
ATOM 25 O5' G B2080 115.074 105.705 30.227 1.00 66.49 O
TER
ATOM 2 P A A2106 114.373 109.363 45.646 1.00 57.73 P
ATOM 3 OP1 A A2106 114.171 108.866 47.031 1.00 58.75 O
ATOM 4 OP2 A A2106 113.436 108.939 44.568 1.00 56.26 O
ATOM 5 O5' A A2106 114.413 110.955 45.701 1.00 53.34 O
ATOM 6 C5' A A2106 115.026 111.633 46.807 1.00 50.48 C
ATOM 7 C4' A A2106 114.915 113.126 46.632 1.00 48.59 C
ATOM 8 O4' A A2106 115.628 113.515 45.433 1.00 48.57 O
ATOM 9 C3' A A2106 113.513 113.658 46.408 1.00 48.46 C
ATOM 10 O3' A A2106 112.812 113.847 47.619 1.00 50.11 O
ATOM 11 C2' A A2106 113.781 114.971 45.702 1.00 47.38 C
ATOM 12 O2' A A2106 114.213 115.966 46.607 1.00 47.31 O
ATOM 13 C1' A A2106 114.928 114.562 44.779 1.00 46.16 C
ATOM 14 N9 A A2106 114.443 114.043 43.501 1.00 43.01 N
ATOM 15 C8 A A2106 114.356 112.730 43.092 1.00 42.12 C
ATOM 16 N7 A A2106 113.870 112.583 41.884 1.00 40.29 N
ATOM 17 C5 A A2106 113.621 113.884 41.469 1.00 40.87 C
ATOM 18 C6 A A2106 113.109 114.408 40.276 1.00 41.02 C
ATOM 19 N6 A A2106 112.744 113.653 39.234 1.00 40.61 N
ATOM 20 N1 A A2106 112.984 115.752 40.183 1.00 40.76 N
ATOM 21 C2 A A2106 113.356 116.504 41.226 1.00 40.93 C
ATOM 22 N3 A A2106 113.859 116.128 42.399 1.00 41.05 N
ATOM 23 C4 A A2106 113.968 114.791 42.455 1.00 41.25 C
ATOM 24 P C A2107 111.250 113.491 47.687 1.00 50.82 P
ATOM 25 OP1 C A2107 110.845 113.708 49.099 1.00 50.41 O
ATOM 26 OP2 C A2107 111.036 112.161 47.049 1.00 50.16 O
ATOM 27 O5' C A2107 110.560 114.587 46.763 1.00 47.64 O
TER
ATOM 1 O3' C B2078 109.526 110.870 31.895 1.00 54.45 O
ATOM 2 P U B2079 111.001 110.950 31.255 1.00 57.40 P
ATOM 3 OP1 U B2079 111.715 112.082 31.902 1.00 56.92 O
ATOM 4 OP2 U B2079 110.860 110.919 29.772 1.00 55.44 O
ATOM 5 O5' U B2079 111.724 109.604 31.689 1.00 55.36 O
ATOM 6 C5' U B2079 112.904 109.174 31.002 1.00 55.72 C
ATOM 7 C4' U B2079 113.497 107.978 31.687 1.00 56.41 C
ATOM 8 O4' U B2079 114.066 108.378 32.961 1.00 54.53 O
ATOM 9 C3' U B2079 112.515 106.854 31.992 1.00 58.39 C
ATOM 10 O3' U B2079 113.211 105.613 31.927 1.00 63.44 O
ATOM 11 C2' U B2079 112.138 107.149 33.443 1.00 57.01 C
ATOM 12 O2' U B2079 111.689 106.014 34.156 1.00 57.39 O
ATOM 13 C1' U B2079 113.479 107.621 33.992 1.00 53.38 C
ATOM 14 N1 U B2079 113.430 108.445 35.206 1.00 50.41 N
ATOM 15 C2 U B2079 113.837 107.854 36.381 1.00 50.33 C
ATOM 16 O2 U B2079 114.161 106.679 36.454 1.00 51.07 O
ATOM 17 N3 U B2079 113.847 108.682 37.473 1.00 50.17 N
ATOM 18 C4 U B2079 113.482 110.007 37.512 1.00 50.48 C
ATOM 19 O4 U B2079 113.622 110.639 38.561 1.00 51.60 O
ATOM 20 C5 U B2079 113.032 110.538 36.261 1.00 50.03 C
ATOM 21 C6 U B2079 113.022 109.758 35.177 1.00 50.43 C
ATOM 22 P G B2080 113.658 105.014 30.504 1.00 65.75 P
ATOM 23 OP1 G B2080 112.662 105.476 29.493 1.00 65.13 O
ATOM 24 OP2 G B2080 113.881 103.558 30.700 1.00 66.34 O
ATOM 25 O5' G B2080 115.074 105.705 30.227 1.00 66.49 O
TER
Atoms:
OP1: (114.171,108.866,47.031)
OP2: (113.436,108.939,44.568)
C3': (113.513,113.658,46.408)
C1': (114.928,114.562,44.779)
C5': (115.026,111.633,46.807)
O4': (115.628,113.515,45.433)
C8: (114.356,112.730,43.092)
O2': (114.213,115.966,46.607)
C6: (113.109,114.408,40.276)
C5: (113.621,113.884,41.469)
C4: (113.968,114.791,42.455)
P: (114.373,109.363,45.646)
C4': (114.915,113.126,46.632)
C2': (113.781,114.971,45.702)
C2: (113.356,116.504,41.226)
N1: (112.984,115.752,40.183)
N3: (113.859,116.128,42.399)
N6: (112.744,113.653,39.234)
N7: (113.870,112.583,41.884)
N9: (114.443,114.043,43.501)
O5': (114.413,110.955,45.701)
O3': (112.812,113.847,47.619)
OP2: (113.436,108.939,44.568)
C3': (113.513,113.658,46.408)
C1': (114.928,114.562,44.779)
C5': (115.026,111.633,46.807)
O4': (115.628,113.515,45.433)
C8: (114.356,112.730,43.092)
O2': (114.213,115.966,46.607)
C6: (113.109,114.408,40.276)
C5: (113.621,113.884,41.469)
C4: (113.968,114.791,42.455)
P: (114.373,109.363,45.646)
C4': (114.915,113.126,46.632)
C2': (113.781,114.971,45.702)
C2: (113.356,116.504,41.226)
N1: (112.984,115.752,40.183)
N3: (113.859,116.128,42.399)
N6: (112.744,113.653,39.234)
N7: (113.870,112.583,41.884)
N9: (114.443,114.043,43.501)
O5': (114.413,110.955,45.701)
O3': (112.812,113.847,47.619)
C4: (113.482,110.007,37.512)
N3: (113.847,108.682,37.473)
OP1: (111.715,112.082,31.902)
OP2: (110.860,110.919,29.772)
C2: (113.837,107.854,36.381)
C1': (113.479,107.621,33.992)
C3': (112.515,106.854,31.992)
O5': (111.724,109.604,31.689)
O4': (114.066,108.378,32.961)
C5': (112.904,109.174,31.002)
P: (111.001,110.950,31.255)
C4': (113.497,107.978,31.687)
C2': (112.138,107.149,33.443)
O2': (111.689,106.014,34.156)
N1: (113.430,108.445,35.206)
O4: (113.622,110.639,38.561)
O2: (114.161,106.679,36.454)
C6: (113.022,109.758,35.177)
C5: (113.032,110.538,36.261)
O3': (113.211,105.613,31.927)
N3: (113.847,108.682,37.473)
OP1: (111.715,112.082,31.902)
OP2: (110.860,110.919,29.772)
C2: (113.837,107.854,36.381)
C1': (113.479,107.621,33.992)
C3': (112.515,106.854,31.992)
O5': (111.724,109.604,31.689)
O4': (114.066,108.378,32.961)
C5': (112.904,109.174,31.002)
P: (111.001,110.950,31.255)
C4': (113.497,107.978,31.687)
C2': (112.138,107.149,33.443)
O2': (111.689,106.014,34.156)
N1: (113.430,108.445,35.206)
O4: (113.622,110.639,38.561)
O2: (114.161,106.679,36.454)
C6: (113.022,109.758,35.177)
C5: (113.032,110.538,36.261)
O3': (113.211,105.613,31.927)
Image (generated by PyMOL):