Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02106:02079
Extra
PDB:
ATOM 1 O3' C A2105 116.018 109.361 45.697 1.00 71.37 O
ATOM 2 P A A2106 114.466 109.681 45.956 1.00 70.97 P
ATOM 3 OP1 A A2106 114.092 109.073 47.259 1.00 71.48 O
ATOM 4 OP2 A A2106 113.717 109.293 44.724 1.00 69.87 O
ATOM 5 O5' A A2106 114.437 111.270 46.105 1.00 68.19 O
ATOM 6 C5' A A2106 115.101 111.930 47.205 1.00 64.81 C
ATOM 7 C4' A A2106 115.013 113.435 47.048 1.00 64.03 C
ATOM 8 O4' A A2106 115.775 113.850 45.882 1.00 62.25 O
ATOM 9 C3' A A2106 113.618 113.984 46.799 1.00 63.59 C
ATOM 10 O3' A A2106 112.872 114.146 47.999 1.00 64.29 O
ATOM 11 C2' A A2106 113.903 115.299 46.088 1.00 61.71 C
ATOM 12 O2' A A2106 114.268 116.331 46.978 1.00 62.09 O
ATOM 13 C1' A A2106 115.097 114.907 45.214 1.00 59.67 C
ATOM 14 N9 A A2106 114.684 114.411 43.900 1.00 56.65 N
ATOM 15 C8 A A2106 114.672 113.106 43.459 1.00 55.10 C
ATOM 16 N7 A A2106 114.216 112.964 42.239 1.00 53.09 N
ATOM 17 C5 A A2106 113.911 114.259 41.848 1.00 53.14 C
ATOM 18 C6 A A2106 113.384 114.778 40.664 1.00 52.67 C
ATOM 19 N6 A A2106 113.045 114.021 39.618 1.00 52.95 N
ATOM 20 N1 A A2106 113.210 116.115 40.585 1.00 51.34 N
ATOM 21 C2 A A2106 113.539 116.863 41.639 1.00 51.46 C
ATOM 22 N3 A A2106 114.038 116.491 42.814 1.00 53.13 N
ATOM 23 C4 A A2106 114.203 115.161 42.855 1.00 54.29 C
ATOM 24 P C A2107 111.305 113.783 48.011 1.00 64.89 P
ATOM 25 OP1 C A2107 110.813 113.991 49.394 1.00 65.54 O
ATOM 26 OP2 C A2107 111.106 112.464 47.347 1.00 62.88 O
ATOM 27 O5' C A2107 110.653 114.902 47.090 1.00 60.90 O
TER
ATOM 1 O3' C B2078 109.833 111.209 32.265 1.00 64.49 O
ATOM 2 P U B2079 111.293 111.249 31.583 1.00 66.72 P
ATOM 3 OP1 U B2079 111.911 112.546 31.963 1.00 66.28 O
ATOM 4 OP2 U B2079 111.123 110.905 30.136 1.00 63.98 O
ATOM 5 O5' U B2079 112.154 110.075 32.227 1.00 65.20 O
ATOM 6 C5' U B2079 113.344 109.633 31.550 1.00 66.52 C
ATOM 7 C4' U B2079 113.912 108.409 32.206 1.00 67.58 C
ATOM 8 O4' U B2079 114.458 108.768 33.497 1.00 67.54 O
ATOM 9 C3' U B2079 112.934 107.273 32.453 1.00 69.84 C
ATOM 10 O3' U B2079 113.657 106.045 32.385 1.00 75.48 O
ATOM 11 C2' U B2079 112.509 107.535 33.898 1.00 68.83 C
ATOM 12 O2' U B2079 112.061 106.386 34.582 1.00 68.26 O
ATOM 13 C1' U B2079 113.828 108.006 34.501 1.00 67.17 C
ATOM 14 N1 U B2079 113.737 108.832 35.713 1.00 65.47 N
ATOM 15 C2 U B2079 114.282 108.317 36.870 1.00 64.40 C
ATOM 16 O2 U B2079 114.737 107.188 36.944 1.00 65.24 O
ATOM 17 N3 U B2079 114.267 109.166 37.944 1.00 63.79 N
ATOM 18 C4 U B2079 113.749 110.440 37.987 1.00 64.97 C
ATOM 19 O4 U B2079 113.887 111.112 39.012 1.00 67.55 O
ATOM 20 C5 U B2079 113.151 110.883 36.764 1.00 64.07 C
ATOM 21 C6 U B2079 113.165 110.085 35.696 1.00 65.16 C
ATOM 22 P G B2080 114.012 105.388 30.956 1.00 78.70 P
ATOM 23 OP1 G B2080 113.011 105.854 29.955 1.00 76.87 O
ATOM 24 OP2 G B2080 114.184 103.926 31.200 1.00 77.11 O
ATOM 25 O5' G B2080 115.446 106.010 30.607 1.00 81.20 O
TER
ATOM 2 P A A2106 114.466 109.681 45.956 1.00 70.97 P
ATOM 3 OP1 A A2106 114.092 109.073 47.259 1.00 71.48 O
ATOM 4 OP2 A A2106 113.717 109.293 44.724 1.00 69.87 O
ATOM 5 O5' A A2106 114.437 111.270 46.105 1.00 68.19 O
ATOM 6 C5' A A2106 115.101 111.930 47.205 1.00 64.81 C
ATOM 7 C4' A A2106 115.013 113.435 47.048 1.00 64.03 C
ATOM 8 O4' A A2106 115.775 113.850 45.882 1.00 62.25 O
ATOM 9 C3' A A2106 113.618 113.984 46.799 1.00 63.59 C
ATOM 10 O3' A A2106 112.872 114.146 47.999 1.00 64.29 O
ATOM 11 C2' A A2106 113.903 115.299 46.088 1.00 61.71 C
ATOM 12 O2' A A2106 114.268 116.331 46.978 1.00 62.09 O
ATOM 13 C1' A A2106 115.097 114.907 45.214 1.00 59.67 C
ATOM 14 N9 A A2106 114.684 114.411 43.900 1.00 56.65 N
ATOM 15 C8 A A2106 114.672 113.106 43.459 1.00 55.10 C
ATOM 16 N7 A A2106 114.216 112.964 42.239 1.00 53.09 N
ATOM 17 C5 A A2106 113.911 114.259 41.848 1.00 53.14 C
ATOM 18 C6 A A2106 113.384 114.778 40.664 1.00 52.67 C
ATOM 19 N6 A A2106 113.045 114.021 39.618 1.00 52.95 N
ATOM 20 N1 A A2106 113.210 116.115 40.585 1.00 51.34 N
ATOM 21 C2 A A2106 113.539 116.863 41.639 1.00 51.46 C
ATOM 22 N3 A A2106 114.038 116.491 42.814 1.00 53.13 N
ATOM 23 C4 A A2106 114.203 115.161 42.855 1.00 54.29 C
ATOM 24 P C A2107 111.305 113.783 48.011 1.00 64.89 P
ATOM 25 OP1 C A2107 110.813 113.991 49.394 1.00 65.54 O
ATOM 26 OP2 C A2107 111.106 112.464 47.347 1.00 62.88 O
ATOM 27 O5' C A2107 110.653 114.902 47.090 1.00 60.90 O
TER
ATOM 1 O3' C B2078 109.833 111.209 32.265 1.00 64.49 O
ATOM 2 P U B2079 111.293 111.249 31.583 1.00 66.72 P
ATOM 3 OP1 U B2079 111.911 112.546 31.963 1.00 66.28 O
ATOM 4 OP2 U B2079 111.123 110.905 30.136 1.00 63.98 O
ATOM 5 O5' U B2079 112.154 110.075 32.227 1.00 65.20 O
ATOM 6 C5' U B2079 113.344 109.633 31.550 1.00 66.52 C
ATOM 7 C4' U B2079 113.912 108.409 32.206 1.00 67.58 C
ATOM 8 O4' U B2079 114.458 108.768 33.497 1.00 67.54 O
ATOM 9 C3' U B2079 112.934 107.273 32.453 1.00 69.84 C
ATOM 10 O3' U B2079 113.657 106.045 32.385 1.00 75.48 O
ATOM 11 C2' U B2079 112.509 107.535 33.898 1.00 68.83 C
ATOM 12 O2' U B2079 112.061 106.386 34.582 1.00 68.26 O
ATOM 13 C1' U B2079 113.828 108.006 34.501 1.00 67.17 C
ATOM 14 N1 U B2079 113.737 108.832 35.713 1.00 65.47 N
ATOM 15 C2 U B2079 114.282 108.317 36.870 1.00 64.40 C
ATOM 16 O2 U B2079 114.737 107.188 36.944 1.00 65.24 O
ATOM 17 N3 U B2079 114.267 109.166 37.944 1.00 63.79 N
ATOM 18 C4 U B2079 113.749 110.440 37.987 1.00 64.97 C
ATOM 19 O4 U B2079 113.887 111.112 39.012 1.00 67.55 O
ATOM 20 C5 U B2079 113.151 110.883 36.764 1.00 64.07 C
ATOM 21 C6 U B2079 113.165 110.085 35.696 1.00 65.16 C
ATOM 22 P G B2080 114.012 105.388 30.956 1.00 78.70 P
ATOM 23 OP1 G B2080 113.011 105.854 29.955 1.00 76.87 O
ATOM 24 OP2 G B2080 114.184 103.926 31.200 1.00 77.11 O
ATOM 25 O5' G B2080 115.446 106.010 30.607 1.00 81.20 O
TER
Atoms:
OP1: (114.092,109.073,47.259)
OP2: (113.717,109.293,44.724)
C3': (113.618,113.984,46.799)
C1': (115.097,114.907,45.214)
C5': (115.101,111.930,47.205)
O4': (115.775,113.850,45.882)
C8: (114.672,113.106,43.459)
O2': (114.268,116.331,46.978)
C6: (113.384,114.778,40.664)
C5: (113.911,114.259,41.848)
C4: (114.203,115.161,42.855)
P: (114.466,109.681,45.956)
C4': (115.013,113.435,47.048)
C2': (113.903,115.299,46.088)
C2: (113.539,116.863,41.639)
N1: (113.210,116.115,40.585)
N3: (114.038,116.491,42.814)
N6: (113.045,114.021,39.618)
N7: (114.216,112.964,42.239)
N9: (114.684,114.411,43.900)
O5': (114.437,111.270,46.105)
O3': (112.872,114.146,47.999)
OP2: (113.717,109.293,44.724)
C3': (113.618,113.984,46.799)
C1': (115.097,114.907,45.214)
C5': (115.101,111.930,47.205)
O4': (115.775,113.850,45.882)
C8: (114.672,113.106,43.459)
O2': (114.268,116.331,46.978)
C6: (113.384,114.778,40.664)
C5: (113.911,114.259,41.848)
C4: (114.203,115.161,42.855)
P: (114.466,109.681,45.956)
C4': (115.013,113.435,47.048)
C2': (113.903,115.299,46.088)
C2: (113.539,116.863,41.639)
N1: (113.210,116.115,40.585)
N3: (114.038,116.491,42.814)
N6: (113.045,114.021,39.618)
N7: (114.216,112.964,42.239)
N9: (114.684,114.411,43.900)
O5': (114.437,111.270,46.105)
O3': (112.872,114.146,47.999)
C4: (113.749,110.440,37.987)
N3: (114.267,109.166,37.944)
OP1: (111.911,112.546,31.963)
OP2: (111.123,110.905,30.136)
C2: (114.282,108.317,36.870)
C1': (113.828,108.006,34.501)
C3': (112.934,107.273,32.453)
O5': (112.154,110.075,32.227)
O4': (114.458,108.768,33.497)
C5': (113.344,109.633,31.550)
P: (111.293,111.249,31.583)
C4': (113.912,108.409,32.206)
C2': (112.509,107.535,33.898)
O2': (112.061,106.386,34.582)
N1: (113.737,108.832,35.713)
O4: (113.887,111.112,39.012)
O2: (114.737,107.188,36.944)
C6: (113.165,110.085,35.696)
C5: (113.151,110.883,36.764)
O3': (113.657,106.045,32.385)
N3: (114.267,109.166,37.944)
OP1: (111.911,112.546,31.963)
OP2: (111.123,110.905,30.136)
C2: (114.282,108.317,36.870)
C1': (113.828,108.006,34.501)
C3': (112.934,107.273,32.453)
O5': (112.154,110.075,32.227)
O4': (114.458,108.768,33.497)
C5': (113.344,109.633,31.550)
P: (111.293,111.249,31.583)
C4': (113.912,108.409,32.206)
C2': (112.509,107.535,33.898)
O2': (112.061,106.386,34.582)
N1: (113.737,108.832,35.713)
O4: (113.887,111.112,39.012)
O2: (114.737,107.188,36.944)
C6: (113.165,110.085,35.696)
C5: (113.151,110.883,36.764)
O3': (113.657,106.045,32.385)
Image (generated by PyMOL):