ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01070:0567

Extra

PDB:
ATOM 1 O3' G A1069 12.541 100.376 132.330 1.00 47.69 O
ATOM 2 P U A1070 13.142 99.822 133.712 1.00 47.24 P
ATOM 3 OP1 U A1070 12.343 100.374 134.831 1.00 47.83 O
ATOM 4 OP2 U A1070 14.610 100.044 133.689 1.00 50.36 O
ATOM 5 O5' U A1070 12.908 98.251 133.621 1.00 46.71 O
ATOM 6 C5' U A1070 11.585 97.700 133.525 1.00 48.88 C
ATOM 7 C4' U A1070 11.648 96.189 133.526 1.00 51.47 C
ATOM 8 O4' U A1070 12.262 95.716 132.297 1.00 51.22 O
ATOM 9 C3' U A1070 12.512 95.566 134.610 1.00 52.86 C
ATOM 10 O3' U A1070 11.871 95.514 135.873 1.00 53.83 O
ATOM 11 C2' U A1070 12.793 94.187 134.039 1.00 53.19 C
ATOM 12 O2' U A1070 11.700 93.302 134.178 1.00 56.66 O
ATOM 13 C1' U A1070 12.986 94.522 132.561 1.00 52.22 C
ATOM 14 N1 U A1070 14.404 94.726 132.223 1.00 50.88 N
ATOM 15 C2 U A1070 15.157 93.596 131.947 1.00 51.62 C
ATOM 16 O2 U A1070 14.693 92.469 131.971 1.00 52.76 O
ATOM 17 N3 U A1070 16.474 93.834 131.644 1.00 51.22 N
ATOM 18 C4 U A1070 17.106 95.052 131.590 1.00 50.19 C
ATOM 19 O4 U A1070 18.303 95.098 131.296 1.00 49.20 O
ATOM 20 C5 U A1070 16.265 96.174 131.888 1.00 49.42 C
ATOM 21 C6 U A1070 14.975 95.978 132.185 1.00 49.67 C
ATOM 22 P G A1071 12.759 95.559 137.213 1.00 55.28 P
ATOM 23 OP1 G A1071 11.794 95.728 138.326 1.00 56.17 O
ATOM 24 OP2 G A1071 13.873 96.529 137.057 1.00 51.98 O
ATOM 25 O5' G A1071 13.402 94.103 137.287 1.00 54.77 O
TER

ATOM 1 O3' C B 566 5.771 89.023 138.461 1.00 66.21 O
ATOM 2 P G B 567 4.863 89.547 137.245 1.00 66.72 P
ATOM 3 OP1 G B 567 3.654 90.202 137.817 1.00 66.20 O
ATOM 4 OP2 G B 567 4.705 88.426 136.275 1.00 65.68 O
ATOM 5 O5' G B 567 5.747 90.686 136.569 1.00 65.45 O
ATOM 6 C5' G B 567 6.130 91.868 137.303 1.00 63.07 C
ATOM 7 C4' G B 567 7.284 92.559 136.608 1.00 61.12 C
ATOM 8 O4' G B 567 8.405 91.642 136.541 1.00 59.55 O
ATOM 9 C3' G B 567 7.031 92.972 135.165 1.00 58.64 C
ATOM 10 O3' G B 567 6.430 94.264 135.135 1.00 55.98 O
ATOM 11 C2' G B 567 8.434 92.971 134.568 1.00 58.43 C
ATOM 12 O2' G B 567 9.172 94.136 134.888 1.00 59.28 O
ATOM 13 C1' G B 567 9.074 91.794 135.307 1.00 57.25 C
ATOM 14 N9 G B 567 9.035 90.509 134.624 1.00 54.79 N
ATOM 15 C8 G B 567 7.964 89.659 134.507 1.00 53.40 C
ATOM 16 N7 G B 567 8.259 88.546 133.896 1.00 53.93 N
ATOM 17 C5 G B 567 9.604 88.675 133.578 1.00 53.93 C
ATOM 18 C6 G B 567 10.486 87.779 132.917 1.00 53.80 C
ATOM 19 O6 G B 567 10.253 86.646 132.481 1.00 54.10 O
ATOM 20 N1 G B 567 11.759 88.318 132.791 1.00 53.85 N
ATOM 21 C2 G B 567 12.142 89.555 133.251 1.00 54.71 C
ATOM 22 N2 G B 567 13.421 89.899 133.036 1.00 55.41 N
ATOM 23 N3 G B 567 11.335 90.393 133.876 1.00 53.87 N
ATOM 24 C4 G B 567 10.090 89.891 134.004 1.00 54.25 C
ATOM 25 P A B 568 5.408 94.652 133.958 1.00 56.25 P
ATOM 26 OP1 A B 568 4.709 95.879 134.421 1.00 53.69 O
ATOM 27 OP2 A B 568 4.616 93.453 133.570 1.00 54.14 O
ATOM 28 O5' A B 568 6.350 95.045 132.732 1.00 57.18 O
TER

Atoms:
C4: (17.106,95.052,131.590)
N3: (16.474,93.834,131.644)
OP1: (12.343,100.374,134.831)
OP2: (14.610,100.044,133.689)
C2: (15.157,93.596,131.947)
C1': (12.986,94.522,132.561)
C3': (12.512,95.566,134.610)
O5': (12.908,98.251,133.621)
O4': (12.262,95.716,132.297)
C5': (11.585,97.700,133.525)
P: (13.142,99.822,133.712)
C4': (11.648,96.189,133.526)
C2': (12.793,94.187,134.039)
O2': (11.700,93.302,134.178)
N1: (14.404,94.726,132.223)
O4: (18.303,95.098,131.296)
O2: (14.693,92.469,131.971)
C6: (14.975,95.978,132.185)
C5: (16.265,96.174,131.888)
O3': (11.871,95.514,135.873)
OP1: (3.654,90.202,137.817)
OP2: (4.705,88.426,136.275)
C3': (7.031,92.972,135.165)
C1': (9.074,91.794,135.307)
C5': (6.130,91.868,137.303)
O6: (10.253,86.646,132.481)
O4': (8.405,91.642,136.541)
C8: (7.964,89.659,134.507)
C2: (12.142,89.555,133.251)
C6: (10.486,87.779,132.917)
C5: (9.604,88.675,133.578)
C4: (10.090,89.891,134.004)
P: (4.863,89.547,137.245)
C4': (7.284,92.559,136.608)
C2': (8.434,92.971,134.568)
O2': (9.172,94.136,134.888)
N1: (11.759,88.318,132.791)
N2: (13.421,89.899,133.036)
N3: (11.335,90.393,133.876)
N7: (8.259,88.546,133.896)
N9: (9.035,90.509,134.624)
O5': (5.747,90.686,136.569)
O3': (6.430,94.264,135.135)
Image (generated by PyMOL):
PyMOL image
show in jmol