ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02481:01925

Extra

PDB:
ATOM 1 O3' G A2480 91.155 122.141 106.022 1.00 36.11 O
ATOM 2 P U A2481 90.331 123.492 105.740 1.00 37.70 P
ATOM 3 OP1 U A2481 90.233 124.242 107.021 1.00 38.81 O
ATOM 4 OP2 U A2481 89.100 123.145 104.995 1.00 40.40 O
ATOM 5 O5' U A2481 91.241 124.317 104.727 1.00 35.50 O
ATOM 6 C5' U A2481 92.485 124.878 105.141 1.00 32.20 C
ATOM 7 C4' U A2481 93.111 125.638 104.004 1.00 31.60 C
ATOM 8 O4' U A2481 93.371 124.733 102.901 1.00 30.74 O
ATOM 9 C3' U A2481 92.252 126.719 103.374 1.00 30.77 C
ATOM 10 O3' U A2481 92.268 127.918 104.129 1.00 30.91 O
ATOM 11 C2' U A2481 92.924 126.896 102.025 1.00 31.52 C
ATOM 12 O2' U A2481 94.102 127.662 102.112 1.00 29.81 O
ATOM 13 C1' U A2481 93.278 125.447 101.677 1.00 32.64 C
ATOM 14 N1 U A2481 92.261 124.816 100.818 1.00 34.38 N
ATOM 15 C2 U A2481 92.297 125.114 99.466 1.00 34.68 C
ATOM 16 O2 U A2481 93.149 125.824 98.968 1.00 33.44 O
ATOM 17 N3 U A2481 91.299 124.547 98.716 1.00 36.35 N
ATOM 18 C4 U A2481 90.293 123.724 99.160 1.00 38.14 C
ATOM 19 O4 U A2481 89.437 123.332 98.362 1.00 40.57 O
ATOM 20 C5 U A2481 90.334 123.435 100.563 1.00 37.52 C
ATOM 21 C6 U A2481 91.293 123.977 101.325 1.00 36.36 C
ATOM 22 P C A2482 91.021 128.926 104.050 1.00 32.27 P
ATOM 23 OP1 C A2482 91.039 129.774 105.271 1.00 32.74 O
ATOM 24 OP2 C A2482 89.803 128.155 103.728 1.00 32.63 O
ATOM 25 O5' C A2482 91.374 129.851 102.805 1.00 30.40 O
TER

ATOM 1 O3' A B1924 102.011 125.158 106.297 1.00 43.25 O
ATOM 2 P G B1925 101.281 126.575 106.114 1.00 42.43 P
ATOM 3 OP1 G B1925 102.218 127.495 105.424 1.00 42.26 O
ATOM 4 OP2 G B1925 100.722 126.949 107.443 1.00 41.46 O
ATOM 5 O5' G B1925 100.075 126.278 105.119 1.00 42.83 O
ATOM 6 C5' G B1925 98.710 126.499 105.521 1.00 41.84 C
ATOM 7 C4' G B1925 97.758 125.940 104.490 1.00 41.10 C
ATOM 8 O4' G B1925 97.592 126.893 103.401 1.00 39.49 O
ATOM 9 C3' G B1925 98.195 124.619 103.859 1.00 41.48 C
ATOM 10 O3' G B1925 97.194 123.623 103.929 1.00 43.79 O
ATOM 11 C2' G B1925 98.508 125.002 102.416 1.00 40.24 C
ATOM 12 O2' G B1925 98.276 123.975 101.470 1.00 38.97 O
ATOM 13 C1' G B1925 97.579 126.192 102.185 1.00 39.57 C
ATOM 14 N9 G B1925 98.121 127.039 101.126 1.00 40.83 N
ATOM 15 C8 G B1925 99.444 127.339 100.910 1.00 42.67 C
ATOM 16 N7 G B1925 99.652 127.957 99.781 1.00 43.26 N
ATOM 17 C5 G B1925 98.388 128.109 99.235 1.00 41.95 C
ATOM 18 C6 G B1925 97.995 128.663 98.008 1.00 43.54 C
ATOM 19 O6 G B1925 98.708 129.103 97.101 1.00 46.27 O
ATOM 20 N1 G B1925 96.615 128.664 97.866 1.00 44.18 N
ATOM 21 C2 G B1925 95.728 128.174 98.785 1.00 42.55 C
ATOM 22 N2 G B1925 94.434 128.310 98.485 1.00 43.12 N
ATOM 23 N3 G B1925 96.085 127.603 99.918 1.00 42.41 N
ATOM 24 C4 G B1925 97.425 127.606 100.080 1.00 42.16 C
ATOM 25 P U B1926 97.548 122.206 104.601 1.00 44.68 P
ATOM 26 OP1 U B1926 96.293 121.412 104.624 1.00 45.60 O
ATOM 27 OP2 U B1926 98.282 122.460 105.872 1.00 45.52 O
ATOM 28 O5' U B1926 98.567 121.510 103.595 1.00 42.98 O
TER

Atoms:
C4: (90.293,123.724,99.160)
N3: (91.299,124.547,98.716)
OP1: (90.233,124.242,107.021)
OP2: (89.100,123.145,104.995)
C2: (92.297,125.114,99.466)
C1': (93.278,125.447,101.677)
C3': (92.252,126.719,103.374)
O5': (91.241,124.317,104.727)
O4': (93.371,124.733,102.901)
C5': (92.485,124.878,105.141)
P: (90.331,123.492,105.740)
C4': (93.111,125.638,104.004)
C2': (92.924,126.896,102.025)
O2': (94.102,127.662,102.112)
N1: (92.261,124.816,100.818)
O4: (89.437,123.332,98.362)
O2: (93.149,125.824,98.968)
C6: (91.293,123.977,101.325)
C5: (90.334,123.435,100.563)
O3': (92.268,127.918,104.129)
OP1: (102.218,127.495,105.424)
OP2: (100.722,126.949,107.443)
C3': (98.195,124.619,103.859)
C1': (97.579,126.192,102.185)
C5': (98.710,126.499,105.521)
O6: (98.708,129.103,97.101)
O4': (97.592,126.893,103.401)
C8: (99.444,127.339,100.910)
C2: (95.728,128.174,98.785)
C6: (97.995,128.663,98.008)
C5: (98.388,128.109,99.235)
C4: (97.425,127.606,100.080)
P: (101.281,126.575,106.114)
C4': (97.758,125.940,104.490)
C2': (98.508,125.002,102.416)
O2': (98.276,123.975,101.470)
N1: (96.615,128.664,97.866)
N2: (94.434,128.310,98.485)
N3: (96.085,127.603,99.918)
N7: (99.652,127.957,99.781)
N9: (98.121,127.039,101.126)
O5': (100.075,126.278,105.119)
O3': (97.194,123.623,103.929)
Image (generated by PyMOL):
PyMOL image
show in jmol