Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2220:A2085
Extra
PDB:
ATOM 1 O3' C A2219 -68.706 -6.747 55.366 1.00 0.01 O
ATOM 2 P A A2220 -68.873 -8.275 54.997 1.00 0.10 P
ATOM 3 OP1 A A2220 -69.885 -8.355 53.919 1.00 0.10 O
ATOM 4 OP2 A A2220 -69.105 -9.009 56.285 1.00 0.10 O
ATOM 5 O5' A A2220 -67.459 -8.643 54.432 1.00 0.10 O
ATOM 6 C5' A A2220 -66.958 -8.029 53.279 1.00 0.10 C
ATOM 7 C4' A A2220 -65.538 -8.417 53.112 1.00 0.10 C
ATOM 8 O4' A A2220 -64.799 -7.930 54.264 1.00 0.10 O
ATOM 9 C3' A A2220 -65.283 -9.921 53.110 1.00 0.10 C
ATOM 10 O3' A A2220 -65.462 -10.518 51.833 1.00 0.10 O
ATOM 11 C2' A A2220 -63.862 -10.017 53.644 1.00 0.10 C
ATOM 12 O2' A A2220 -62.909 -9.719 52.622 1.00 0.10 O
ATOM 13 C1' A A2220 -63.858 -8.888 54.680 1.00 0.10 C
ATOM 14 N9 A A2220 -64.246 -9.356 56.026 1.00 0.01 N
ATOM 15 C8 A A2220 -65.457 -9.331 56.669 1.00 0.01 C
ATOM 16 N7 A A2220 -65.419 -9.846 57.880 1.00 0.01 N
ATOM 17 C5 A A2220 -64.098 -10.230 58.037 1.00 0.01 C
ATOM 18 C6 A A2220 -63.381 -10.842 59.073 1.00 0.01 C
ATOM 19 N6 A A2220 -63.856 -11.213 60.235 1.00 0.01 N
ATOM 20 N1 A A2220 -62.088 -11.091 58.911 1.00 0.01 N
ATOM 21 C2 A A2220 -61.542 -10.729 57.741 1.00 0.01 C
ATOM 22 N3 A A2220 -62.096 -10.146 56.670 1.00 0.01 N
ATOM 23 C4 A A2220 -63.389 -9.927 56.902 1.00 0.01 C
ATOM 24 P G A2221 -66.525 -11.708 51.622 1.00 0.01 P
ATOM 25 OP1 G A2221 -66.781 -11.813 50.177 1.00 0.01 O
ATOM 26 OP2 G A2221 -67.660 -11.451 52.520 1.00 0.01 O
ATOM 27 O5' G A2221 -65.715 -12.969 52.123 1.00 0.01 O
TER
ATOM 1 O3' C B2084 -64.576 -14.715 68.294 1.00 0.01 O
ATOM 2 P U B2085 -64.229 -13.167 68.391 1.00 0.01 P
ATOM 3 OP1 U B2085 -63.352 -12.843 67.238 1.00 0.01 O
ATOM 4 OP2 U B2085 -63.747 -12.924 69.753 1.00 0.01 O
ATOM 5 O5' U B2085 -65.638 -12.483 68.188 1.00 0.01 O
ATOM 6 C5' U B2085 -66.219 -11.729 69.221 1.00 0.01 C
ATOM 7 C4' U B2085 -67.354 -10.908 68.715 1.00 0.01 C
ATOM 8 O4' U B2085 -67.023 -10.386 67.394 1.00 0.01 O
ATOM 9 C3' U B2085 -68.666 -11.658 68.544 1.00 0.01 C
ATOM 10 O3' U B2085 -69.736 -10.797 68.927 1.00 0.01 O
ATOM 11 C2' U B2085 -68.727 -11.907 67.031 1.00 0.01 C
ATOM 12 O2' U B2085 -70.024 -12.089 66.530 1.00 0.01 O
ATOM 13 C1' U B2085 -68.122 -10.613 66.534 1.00 0.01 C
ATOM 14 N1 U B2085 -67.670 -10.591 65.108 1.00 0.01 N
ATOM 15 C2 U B2085 -68.536 -9.970 64.229 1.00 0.01 C
ATOM 16 O2 U B2085 -69.621 -9.530 64.506 1.00 0.01 O
ATOM 17 N3 U B2085 -68.136 -9.909 62.949 1.00 0.01 N
ATOM 18 C4 U B2085 -66.955 -10.373 62.439 1.00 0.01 C
ATOM 19 O4 U B2085 -66.781 -10.207 61.231 1.00 0.01 O
ATOM 20 C5 U B2085 -66.065 -10.986 63.368 1.00 0.01 C
ATOM 21 C6 U B2085 -66.458 -11.062 64.645 1.00 0.01 C
ATOM 22 P G B2086 -69.967 -10.435 70.471 1.00 1.02 P
ATOM 23 OP1 G B2086 -69.565 -11.615 71.248 1.00 1.02 O
ATOM 24 OP2 G B2086 -71.357 -9.930 70.600 1.00 1.02 O
ATOM 25 O5' G B2086 -68.943 -9.254 70.722 1.00 1.02 O
TER
ATOM 2 P A A2220 -68.873 -8.275 54.997 1.00 0.10 P
ATOM 3 OP1 A A2220 -69.885 -8.355 53.919 1.00 0.10 O
ATOM 4 OP2 A A2220 -69.105 -9.009 56.285 1.00 0.10 O
ATOM 5 O5' A A2220 -67.459 -8.643 54.432 1.00 0.10 O
ATOM 6 C5' A A2220 -66.958 -8.029 53.279 1.00 0.10 C
ATOM 7 C4' A A2220 -65.538 -8.417 53.112 1.00 0.10 C
ATOM 8 O4' A A2220 -64.799 -7.930 54.264 1.00 0.10 O
ATOM 9 C3' A A2220 -65.283 -9.921 53.110 1.00 0.10 C
ATOM 10 O3' A A2220 -65.462 -10.518 51.833 1.00 0.10 O
ATOM 11 C2' A A2220 -63.862 -10.017 53.644 1.00 0.10 C
ATOM 12 O2' A A2220 -62.909 -9.719 52.622 1.00 0.10 O
ATOM 13 C1' A A2220 -63.858 -8.888 54.680 1.00 0.10 C
ATOM 14 N9 A A2220 -64.246 -9.356 56.026 1.00 0.01 N
ATOM 15 C8 A A2220 -65.457 -9.331 56.669 1.00 0.01 C
ATOM 16 N7 A A2220 -65.419 -9.846 57.880 1.00 0.01 N
ATOM 17 C5 A A2220 -64.098 -10.230 58.037 1.00 0.01 C
ATOM 18 C6 A A2220 -63.381 -10.842 59.073 1.00 0.01 C
ATOM 19 N6 A A2220 -63.856 -11.213 60.235 1.00 0.01 N
ATOM 20 N1 A A2220 -62.088 -11.091 58.911 1.00 0.01 N
ATOM 21 C2 A A2220 -61.542 -10.729 57.741 1.00 0.01 C
ATOM 22 N3 A A2220 -62.096 -10.146 56.670 1.00 0.01 N
ATOM 23 C4 A A2220 -63.389 -9.927 56.902 1.00 0.01 C
ATOM 24 P G A2221 -66.525 -11.708 51.622 1.00 0.01 P
ATOM 25 OP1 G A2221 -66.781 -11.813 50.177 1.00 0.01 O
ATOM 26 OP2 G A2221 -67.660 -11.451 52.520 1.00 0.01 O
ATOM 27 O5' G A2221 -65.715 -12.969 52.123 1.00 0.01 O
TER
ATOM 1 O3' C B2084 -64.576 -14.715 68.294 1.00 0.01 O
ATOM 2 P U B2085 -64.229 -13.167 68.391 1.00 0.01 P
ATOM 3 OP1 U B2085 -63.352 -12.843 67.238 1.00 0.01 O
ATOM 4 OP2 U B2085 -63.747 -12.924 69.753 1.00 0.01 O
ATOM 5 O5' U B2085 -65.638 -12.483 68.188 1.00 0.01 O
ATOM 6 C5' U B2085 -66.219 -11.729 69.221 1.00 0.01 C
ATOM 7 C4' U B2085 -67.354 -10.908 68.715 1.00 0.01 C
ATOM 8 O4' U B2085 -67.023 -10.386 67.394 1.00 0.01 O
ATOM 9 C3' U B2085 -68.666 -11.658 68.544 1.00 0.01 C
ATOM 10 O3' U B2085 -69.736 -10.797 68.927 1.00 0.01 O
ATOM 11 C2' U B2085 -68.727 -11.907 67.031 1.00 0.01 C
ATOM 12 O2' U B2085 -70.024 -12.089 66.530 1.00 0.01 O
ATOM 13 C1' U B2085 -68.122 -10.613 66.534 1.00 0.01 C
ATOM 14 N1 U B2085 -67.670 -10.591 65.108 1.00 0.01 N
ATOM 15 C2 U B2085 -68.536 -9.970 64.229 1.00 0.01 C
ATOM 16 O2 U B2085 -69.621 -9.530 64.506 1.00 0.01 O
ATOM 17 N3 U B2085 -68.136 -9.909 62.949 1.00 0.01 N
ATOM 18 C4 U B2085 -66.955 -10.373 62.439 1.00 0.01 C
ATOM 19 O4 U B2085 -66.781 -10.207 61.231 1.00 0.01 O
ATOM 20 C5 U B2085 -66.065 -10.986 63.368 1.00 0.01 C
ATOM 21 C6 U B2085 -66.458 -11.062 64.645 1.00 0.01 C
ATOM 22 P G B2086 -69.967 -10.435 70.471 1.00 1.02 P
ATOM 23 OP1 G B2086 -69.565 -11.615 71.248 1.00 1.02 O
ATOM 24 OP2 G B2086 -71.357 -9.930 70.600 1.00 1.02 O
ATOM 25 O5' G B2086 -68.943 -9.254 70.722 1.00 1.02 O
TER
Atoms:
OP1: (-69.885,-8.355,53.919)
OP2: (-69.105,-9.009,56.285)
C3': (-65.283,-9.921,53.110)
C1': (-63.858,-8.888,54.680)
C5': (-66.958,-8.029,53.279)
O4': (-64.799,-7.930,54.264)
C8: (-65.457,-9.331,56.669)
O2': (-62.909,-9.719,52.622)
C6: (-63.381,-10.842,59.073)
C5: (-64.098,-10.230,58.037)
C4: (-63.389,-9.927,56.902)
P: (-68.873,-8.275,54.997)
C4': (-65.538,-8.417,53.112)
C2': (-63.862,-10.017,53.644)
C2: (-61.542,-10.729,57.741)
N1: (-62.088,-11.091,58.911)
N3: (-62.096,-10.146,56.670)
N6: (-63.856,-11.213,60.235)
N7: (-65.419,-9.846,57.880)
N9: (-64.246,-9.356,56.026)
O5': (-67.459,-8.643,54.432)
O3': (-65.462,-10.518,51.833)
OP2: (-69.105,-9.009,56.285)
C3': (-65.283,-9.921,53.110)
C1': (-63.858,-8.888,54.680)
C5': (-66.958,-8.029,53.279)
O4': (-64.799,-7.930,54.264)
C8: (-65.457,-9.331,56.669)
O2': (-62.909,-9.719,52.622)
C6: (-63.381,-10.842,59.073)
C5: (-64.098,-10.230,58.037)
C4: (-63.389,-9.927,56.902)
P: (-68.873,-8.275,54.997)
C4': (-65.538,-8.417,53.112)
C2': (-63.862,-10.017,53.644)
C2: (-61.542,-10.729,57.741)
N1: (-62.088,-11.091,58.911)
N3: (-62.096,-10.146,56.670)
N6: (-63.856,-11.213,60.235)
N7: (-65.419,-9.846,57.880)
N9: (-64.246,-9.356,56.026)
O5': (-67.459,-8.643,54.432)
O3': (-65.462,-10.518,51.833)
C4: (-66.955,-10.373,62.439)
N3: (-68.136,-9.909,62.949)
OP1: (-63.352,-12.843,67.238)
OP2: (-63.747,-12.924,69.753)
C2: (-68.536,-9.970,64.229)
C1': (-68.122,-10.613,66.534)
C3': (-68.666,-11.658,68.544)
O5': (-65.638,-12.483,68.188)
O4': (-67.023,-10.386,67.394)
C5': (-66.219,-11.729,69.221)
P: (-64.229,-13.167,68.391)
C4': (-67.354,-10.908,68.715)
C2': (-68.727,-11.907,67.031)
O2': (-70.024,-12.089,66.530)
N1: (-67.670,-10.591,65.108)
O4: (-66.781,-10.207,61.231)
O2: (-69.621,-9.530,64.506)
C6: (-66.458,-11.062,64.645)
C5: (-66.065,-10.986,63.368)
O3': (-69.736,-10.797,68.927)
N3: (-68.136,-9.909,62.949)
OP1: (-63.352,-12.843,67.238)
OP2: (-63.747,-12.924,69.753)
C2: (-68.536,-9.970,64.229)
C1': (-68.122,-10.613,66.534)
C3': (-68.666,-11.658,68.544)
O5': (-65.638,-12.483,68.188)
O4': (-67.023,-10.386,67.394)
C5': (-66.219,-11.729,69.221)
P: (-64.229,-13.167,68.391)
C4': (-67.354,-10.908,68.715)
C2': (-68.727,-11.907,67.031)
O2': (-70.024,-12.089,66.530)
N1: (-67.670,-10.591,65.108)
O4: (-66.781,-10.207,61.231)
O2: (-69.621,-9.530,64.506)
C6: (-66.458,-11.062,64.645)
C5: (-66.065,-10.986,63.368)
O3': (-69.736,-10.797,68.927)
Image (generated by PyMOL):