Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01070:0567
Extra
PDB:
ATOM 1 O3' G A1069 12.619 100.550 132.572 1.00 57.54 O
ATOM 2 P U A1070 13.140 100.014 133.994 1.00 58.41 P
ATOM 3 OP1 U A1070 12.230 100.531 135.040 1.00 60.72 O
ATOM 4 OP2 U A1070 14.595 100.307 134.084 1.00 59.77 O
ATOM 5 O5' U A1070 12.952 98.436 133.896 1.00 57.68 O
ATOM 6 C5' U A1070 11.639 97.848 133.897 1.00 57.73 C
ATOM 7 C4' U A1070 11.740 96.340 133.920 1.00 58.85 C
ATOM 8 O4' U A1070 12.334 95.875 132.679 1.00 57.98 O
ATOM 9 C3' U A1070 12.642 95.735 134.984 1.00 59.84 C
ATOM 10 O3' U A1070 12.049 95.684 136.279 1.00 61.30 O
ATOM 11 C2' U A1070 12.918 94.354 134.408 1.00 59.99 C
ATOM 12 O2' U A1070 11.848 93.448 134.583 1.00 61.79 O
ATOM 13 C1' U A1070 13.067 94.684 132.922 1.00 58.83 C
ATOM 14 N1 U A1070 14.474 94.895 132.546 1.00 58.75 N
ATOM 15 C2 U A1070 15.226 93.771 132.210 1.00 59.28 C
ATOM 16 O2 U A1070 14.765 92.638 132.185 1.00 59.96 O
ATOM 17 N3 U A1070 16.538 94.023 131.903 1.00 58.07 N
ATOM 18 C4 U A1070 17.165 95.245 131.893 1.00 58.31 C
ATOM 19 O4 U A1070 18.368 95.301 131.633 1.00 59.10 O
ATOM 20 C5 U A1070 16.323 96.355 132.232 1.00 57.75 C
ATOM 21 C6 U A1070 15.041 96.147 132.538 1.00 57.03 C
ATOM 22 P G A1071 12.995 95.649 137.587 1.00 63.02 P
ATOM 23 OP1 G A1071 12.111 95.810 138.765 1.00 62.48 O
ATOM 24 OP2 G A1071 14.135 96.586 137.400 1.00 60.53 O
ATOM 25 O5' G A1071 13.572 94.161 137.595 1.00 63.54 O
TER
ATOM 1 O3' C B 566 5.733 89.332 138.798 1.00 73.56 O
ATOM 2 P G B 567 4.837 89.820 137.565 1.00 72.38 P
ATOM 3 OP1 G B 567 3.616 90.461 138.111 1.00 71.78 O
ATOM 4 OP2 G B 567 4.715 88.675 136.626 1.00 72.34 O
ATOM 5 O5' G B 567 5.724 90.946 136.869 1.00 73.36 O
ATOM 6 C5' G B 567 6.112 92.144 137.584 1.00 70.71 C
ATOM 7 C4' G B 567 7.291 92.806 136.899 1.00 67.43 C
ATOM 8 O4' G B 567 8.392 91.864 136.863 1.00 66.36 O
ATOM 9 C3' G B 567 7.072 93.198 135.445 1.00 65.40 C
ATOM 10 O3' G B 567 6.487 94.492 135.360 1.00 62.57 O
ATOM 11 C2' G B 567 8.482 93.167 134.871 1.00 65.05 C
ATOM 12 O2' G B 567 9.214 94.346 135.143 1.00 64.32 O
ATOM 13 C1' G B 567 9.097 92.000 135.647 1.00 64.95 C
ATOM 14 N9 G B 567 9.058 90.713 134.968 1.00 63.78 N
ATOM 15 C8 G B 567 7.970 89.898 134.792 1.00 64.11 C
ATOM 16 N7 G B 567 8.257 88.794 134.162 1.00 65.19 N
ATOM 17 C5 G B 567 9.617 88.888 133.907 1.00 64.61 C
ATOM 18 C6 G B 567 10.494 87.987 133.252 1.00 65.43 C
ATOM 19 O6 G B 567 10.240 86.881 132.760 1.00 67.09 O
ATOM 20 N1 G B 567 11.790 88.484 133.200 1.00 65.55 N
ATOM 21 C2 G B 567 12.192 89.694 133.712 1.00 66.51 C
ATOM 22 N2 G B 567 13.487 90.011 133.546 1.00 67.26 N
ATOM 23 N3 G B 567 11.385 90.535 134.335 1.00 65.32 N
ATOM 24 C4 G B 567 10.122 90.071 134.393 1.00 64.14 C
ATOM 25 P A B 568 5.439 94.820 134.190 1.00 62.39 P
ATOM 26 OP1 A B 568 4.658 95.998 134.646 1.00 61.75 O
ATOM 27 OP2 A B 568 4.731 93.563 133.825 1.00 61.43 O
ATOM 28 O5' A B 568 6.344 95.270 132.956 1.00 62.59 O
TER
ATOM 2 P U A1070 13.140 100.014 133.994 1.00 58.41 P
ATOM 3 OP1 U A1070 12.230 100.531 135.040 1.00 60.72 O
ATOM 4 OP2 U A1070 14.595 100.307 134.084 1.00 59.77 O
ATOM 5 O5' U A1070 12.952 98.436 133.896 1.00 57.68 O
ATOM 6 C5' U A1070 11.639 97.848 133.897 1.00 57.73 C
ATOM 7 C4' U A1070 11.740 96.340 133.920 1.00 58.85 C
ATOM 8 O4' U A1070 12.334 95.875 132.679 1.00 57.98 O
ATOM 9 C3' U A1070 12.642 95.735 134.984 1.00 59.84 C
ATOM 10 O3' U A1070 12.049 95.684 136.279 1.00 61.30 O
ATOM 11 C2' U A1070 12.918 94.354 134.408 1.00 59.99 C
ATOM 12 O2' U A1070 11.848 93.448 134.583 1.00 61.79 O
ATOM 13 C1' U A1070 13.067 94.684 132.922 1.00 58.83 C
ATOM 14 N1 U A1070 14.474 94.895 132.546 1.00 58.75 N
ATOM 15 C2 U A1070 15.226 93.771 132.210 1.00 59.28 C
ATOM 16 O2 U A1070 14.765 92.638 132.185 1.00 59.96 O
ATOM 17 N3 U A1070 16.538 94.023 131.903 1.00 58.07 N
ATOM 18 C4 U A1070 17.165 95.245 131.893 1.00 58.31 C
ATOM 19 O4 U A1070 18.368 95.301 131.633 1.00 59.10 O
ATOM 20 C5 U A1070 16.323 96.355 132.232 1.00 57.75 C
ATOM 21 C6 U A1070 15.041 96.147 132.538 1.00 57.03 C
ATOM 22 P G A1071 12.995 95.649 137.587 1.00 63.02 P
ATOM 23 OP1 G A1071 12.111 95.810 138.765 1.00 62.48 O
ATOM 24 OP2 G A1071 14.135 96.586 137.400 1.00 60.53 O
ATOM 25 O5' G A1071 13.572 94.161 137.595 1.00 63.54 O
TER
ATOM 1 O3' C B 566 5.733 89.332 138.798 1.00 73.56 O
ATOM 2 P G B 567 4.837 89.820 137.565 1.00 72.38 P
ATOM 3 OP1 G B 567 3.616 90.461 138.111 1.00 71.78 O
ATOM 4 OP2 G B 567 4.715 88.675 136.626 1.00 72.34 O
ATOM 5 O5' G B 567 5.724 90.946 136.869 1.00 73.36 O
ATOM 6 C5' G B 567 6.112 92.144 137.584 1.00 70.71 C
ATOM 7 C4' G B 567 7.291 92.806 136.899 1.00 67.43 C
ATOM 8 O4' G B 567 8.392 91.864 136.863 1.00 66.36 O
ATOM 9 C3' G B 567 7.072 93.198 135.445 1.00 65.40 C
ATOM 10 O3' G B 567 6.487 94.492 135.360 1.00 62.57 O
ATOM 11 C2' G B 567 8.482 93.167 134.871 1.00 65.05 C
ATOM 12 O2' G B 567 9.214 94.346 135.143 1.00 64.32 O
ATOM 13 C1' G B 567 9.097 92.000 135.647 1.00 64.95 C
ATOM 14 N9 G B 567 9.058 90.713 134.968 1.00 63.78 N
ATOM 15 C8 G B 567 7.970 89.898 134.792 1.00 64.11 C
ATOM 16 N7 G B 567 8.257 88.794 134.162 1.00 65.19 N
ATOM 17 C5 G B 567 9.617 88.888 133.907 1.00 64.61 C
ATOM 18 C6 G B 567 10.494 87.987 133.252 1.00 65.43 C
ATOM 19 O6 G B 567 10.240 86.881 132.760 1.00 67.09 O
ATOM 20 N1 G B 567 11.790 88.484 133.200 1.00 65.55 N
ATOM 21 C2 G B 567 12.192 89.694 133.712 1.00 66.51 C
ATOM 22 N2 G B 567 13.487 90.011 133.546 1.00 67.26 N
ATOM 23 N3 G B 567 11.385 90.535 134.335 1.00 65.32 N
ATOM 24 C4 G B 567 10.122 90.071 134.393 1.00 64.14 C
ATOM 25 P A B 568 5.439 94.820 134.190 1.00 62.39 P
ATOM 26 OP1 A B 568 4.658 95.998 134.646 1.00 61.75 O
ATOM 27 OP2 A B 568 4.731 93.563 133.825 1.00 61.43 O
ATOM 28 O5' A B 568 6.344 95.270 132.956 1.00 62.59 O
TER
Atoms:
C4: (17.165,95.245,131.893)
N3: (16.538,94.023,131.903)
OP1: (12.230,100.531,135.040)
OP2: (14.595,100.307,134.084)
C2: (15.226,93.771,132.210)
C1': (13.067,94.684,132.922)
C3': (12.642,95.735,134.984)
O5': (12.952,98.436,133.896)
O4': (12.334,95.875,132.679)
C5': (11.639,97.848,133.897)
P: (13.140,100.014,133.994)
C4': (11.740,96.340,133.920)
C2': (12.918,94.354,134.408)
O2': (11.848,93.448,134.583)
N1: (14.474,94.895,132.546)
O4: (18.368,95.301,131.633)
O2: (14.765,92.638,132.185)
C6: (15.041,96.147,132.538)
C5: (16.323,96.355,132.232)
O3': (12.049,95.684,136.279)
N3: (16.538,94.023,131.903)
OP1: (12.230,100.531,135.040)
OP2: (14.595,100.307,134.084)
C2: (15.226,93.771,132.210)
C1': (13.067,94.684,132.922)
C3': (12.642,95.735,134.984)
O5': (12.952,98.436,133.896)
O4': (12.334,95.875,132.679)
C5': (11.639,97.848,133.897)
P: (13.140,100.014,133.994)
C4': (11.740,96.340,133.920)
C2': (12.918,94.354,134.408)
O2': (11.848,93.448,134.583)
N1: (14.474,94.895,132.546)
O4: (18.368,95.301,131.633)
O2: (14.765,92.638,132.185)
C6: (15.041,96.147,132.538)
C5: (16.323,96.355,132.232)
O3': (12.049,95.684,136.279)
OP1: (3.616,90.461,138.111)
OP2: (4.715,88.675,136.626)
C3': (7.072,93.198,135.445)
C1': (9.097,92.000,135.647)
C5': (6.112,92.144,137.584)
O6: (10.240,86.881,132.760)
O4': (8.392,91.864,136.863)
C8: (7.970,89.898,134.792)
C2: (12.192,89.694,133.712)
C6: (10.494,87.987,133.252)
C5: (9.617,88.888,133.907)
C4: (10.122,90.071,134.393)
P: (4.837,89.820,137.565)
C4': (7.291,92.806,136.899)
C2': (8.482,93.167,134.871)
O2': (9.214,94.346,135.143)
N1: (11.790,88.484,133.200)
N2: (13.487,90.011,133.546)
N3: (11.385,90.535,134.335)
N7: (8.257,88.794,134.162)
N9: (9.058,90.713,134.968)
O5': (5.724,90.946,136.869)
O3': (6.487,94.492,135.360)
OP2: (4.715,88.675,136.626)
C3': (7.072,93.198,135.445)
C1': (9.097,92.000,135.647)
C5': (6.112,92.144,137.584)
O6: (10.240,86.881,132.760)
O4': (8.392,91.864,136.863)
C8: (7.970,89.898,134.792)
C2: (12.192,89.694,133.712)
C6: (10.494,87.987,133.252)
C5: (9.617,88.888,133.907)
C4: (10.122,90.071,134.393)
P: (4.837,89.820,137.565)
C4': (7.291,92.806,136.899)
C2': (8.482,93.167,134.871)
O2': (9.214,94.346,135.143)
N1: (11.790,88.484,133.200)
N2: (13.487,90.011,133.546)
N3: (11.385,90.535,134.335)
N7: (8.257,88.794,134.162)
N9: (9.058,90.713,134.968)
O5': (5.724,90.946,136.869)
O3': (6.487,94.492,135.360)
Image (generated by PyMOL):