ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02481:01925

Extra

PDB:
ATOM 1 O3' G A2480 91.172 122.114 106.119 1.00 41.69 O
ATOM 2 P U A2481 90.332 123.458 105.861 1.00 41.96 P
ATOM 3 OP1 U A2481 90.256 124.200 107.144 1.00 41.89 O
ATOM 4 OP2 U A2481 89.079 123.095 105.149 1.00 42.87 O
ATOM 5 O5' U A2481 91.229 124.281 104.834 1.00 37.84 O
ATOM 6 C5' U A2481 92.444 124.896 105.254 1.00 35.98 C
ATOM 7 C4' U A2481 93.012 125.735 104.144 1.00 36.28 C
ATOM 8 O4' U A2481 93.337 124.884 103.022 1.00 37.12 O
ATOM 9 C3' U A2481 92.092 126.776 103.536 1.00 36.20 C
ATOM 10 O3' U A2481 92.029 127.957 104.315 1.00 35.71 O
ATOM 11 C2' U A2481 92.759 127.032 102.198 1.00 37.50 C
ATOM 12 O2' U A2481 93.892 127.859 102.337 1.00 36.73 O
ATOM 13 C1' U A2481 93.197 125.617 101.816 1.00 39.19 C
ATOM 14 N1 U A2481 92.210 124.941 100.957 1.00 42.65 N
ATOM 15 C2 U A2481 92.291 125.169 99.597 1.00 44.12 C
ATOM 16 O2 U A2481 93.158 125.857 99.096 1.00 44.79 O
ATOM 17 N3 U A2481 91.317 124.563 98.844 1.00 45.08 N
ATOM 18 C4 U A2481 90.293 123.763 99.299 1.00 46.15 C
ATOM 19 O4 U A2481 89.439 123.360 98.504 1.00 46.57 O
ATOM 20 C5 U A2481 90.294 123.548 100.715 1.00 45.94 C
ATOM 21 C6 U A2481 91.228 124.130 101.477 1.00 44.44 C
ATOM 22 P C A2482 90.800 128.970 104.121 1.00 36.57 P
ATOM 23 OP1 C A2482 90.730 129.846 105.318 1.00 35.88 O
ATOM 24 OP2 C A2482 89.607 128.177 103.734 1.00 37.53 O
ATOM 25 O5' C A2482 91.244 129.859 102.877 1.00 33.03 O
TER

ATOM 1 O3' A B1924 101.854 125.324 106.308 1.00 50.33 O
ATOM 2 P G B1925 101.209 126.785 106.233 1.00 50.00 P
ATOM 3 OP1 G B1925 102.237 127.682 105.653 1.00 51.13 O
ATOM 4 OP2 G B1925 100.639 127.085 107.570 1.00 49.71 O
ATOM 5 O5' G B1925 100.007 126.647 105.195 1.00 51.47 O
ATOM 6 C5' G B1925 98.639 126.822 105.625 1.00 51.20 C
ATOM 7 C4' G B1925 97.681 126.215 104.627 1.00 50.13 C
ATOM 8 O4' G B1925 97.507 127.131 103.513 1.00 48.81 O
ATOM 9 C3' G B1925 98.104 124.870 104.031 1.00 50.63 C
ATOM 10 O3' G B1925 97.119 123.853 104.149 1.00 51.70 O
ATOM 11 C2' G B1925 98.380 125.202 102.570 1.00 49.92 C
ATOM 12 O2' G B1925 98.112 124.130 101.687 1.00 48.39 O
ATOM 13 C1' G B1925 97.456 126.391 102.321 1.00 49.99 C
ATOM 14 N9 G B1925 97.964 127.213 101.224 1.00 51.81 N
ATOM 15 C8 G B1925 99.276 127.533 100.980 1.00 52.73 C
ATOM 16 N7 G B1925 99.454 128.128 99.834 1.00 53.29 N
ATOM 17 C5 G B1925 98.180 128.242 99.304 1.00 52.67 C
ATOM 18 C6 G B1925 97.753 128.771 98.073 1.00 52.98 C
ATOM 19 O6 G B1925 98.439 129.212 97.150 1.00 54.58 O
ATOM 20 N1 G B1925 96.372 128.744 97.955 1.00 53.13 N
ATOM 21 C2 G B1925 95.512 128.248 98.894 1.00 52.50 C
ATOM 22 N2 G B1925 94.209 128.342 98.606 1.00 52.06 N
ATOM 23 N3 G B1925 95.899 127.708 100.034 1.00 53.30 N
ATOM 24 C4 G B1925 97.241 127.737 100.174 1.00 52.88 C
ATOM 25 P U B1926 97.537 122.417 104.764 1.00 54.20 P
ATOM 26 OP1 U B1926 96.313 121.578 104.810 1.00 55.06 O
ATOM 27 OP2 U B1926 98.326 122.631 106.011 1.00 53.66 O
ATOM 28 O5' U B1926 98.508 121.764 103.686 1.00 52.47 O
TER

Atoms:
C4: (90.293,123.763,99.299)
N3: (91.317,124.563,98.844)
OP1: (90.256,124.200,107.144)
OP2: (89.079,123.095,105.149)
C2: (92.291,125.169,99.597)
C1': (93.197,125.617,101.816)
C3': (92.092,126.776,103.536)
O5': (91.229,124.281,104.834)
O4': (93.337,124.884,103.022)
C5': (92.444,124.896,105.254)
P: (90.332,123.458,105.861)
C4': (93.012,125.735,104.144)
C2': (92.759,127.032,102.198)
O2': (93.892,127.859,102.337)
N1: (92.210,124.941,100.957)
O4: (89.439,123.360,98.504)
O2: (93.158,125.857,99.096)
C6: (91.228,124.130,101.477)
C5: (90.294,123.548,100.715)
O3': (92.029,127.957,104.315)
OP1: (102.237,127.682,105.653)
OP2: (100.639,127.085,107.570)
C3': (98.104,124.870,104.031)
C1': (97.456,126.391,102.321)
C5': (98.639,126.822,105.625)
O6: (98.439,129.212,97.150)
O4': (97.507,127.131,103.513)
C8: (99.276,127.533,100.980)
C2: (95.512,128.248,98.894)
C6: (97.753,128.771,98.073)
C5: (98.180,128.242,99.304)
C4: (97.241,127.737,100.174)
P: (101.209,126.785,106.233)
C4': (97.681,126.215,104.627)
C2': (98.380,125.202,102.570)
O2': (98.112,124.130,101.687)
N1: (96.372,128.744,97.955)
N2: (94.209,128.342,98.606)
N3: (95.899,127.708,100.034)
N7: (99.454,128.128,99.834)
N9: (97.964,127.213,101.224)
O5': (100.007,126.647,105.195)
O3': (97.119,123.853,104.149)
Image (generated by PyMOL):
PyMOL image
show in jmol