Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01787:01964
Extra
PDB:
ATOM 1 O3' G A1786 105.530 133.284 92.631 1.00 33.73 O
ATOM 2 P A A1787 107.107 133.011 92.476 1.00 35.98 P
ATOM 3 OP1 A A1787 107.449 132.951 91.032 1.00 34.40 O
ATOM 4 OP2 A A1787 107.451 131.871 93.347 1.00 37.03 O
ATOM 5 O5' A A1787 107.806 134.299 93.104 1.00 37.44 O
ATOM 6 C5' A A1787 107.605 135.621 92.550 1.00 35.92 C
ATOM 7 C4' A A1787 108.014 136.663 93.565 1.00 36.61 C
ATOM 8 O4' A A1787 109.469 136.759 93.615 1.00 37.33 O
ATOM 9 C3' A A1787 107.610 138.095 93.283 1.00 35.61 C
ATOM 10 O3' A A1787 106.250 138.347 93.562 1.00 35.17 O
ATOM 11 C2' A A1787 108.549 138.846 94.208 1.00 35.18 C
ATOM 12 O2' A A1787 108.186 138.718 95.564 1.00 34.44 O
ATOM 13 C1' A A1787 109.850 138.089 93.943 1.00 36.23 C
ATOM 14 N9 A A1787 110.457 138.708 92.766 1.00 37.74 N
ATOM 15 C8 A A1787 110.405 138.295 91.460 1.00 35.77 C
ATOM 16 N7 A A1787 110.907 139.160 90.616 1.00 38.61 N
ATOM 17 C5 A A1787 111.353 140.198 91.423 1.00 38.47 C
ATOM 18 C6 A A1787 111.952 141.435 91.131 1.00 37.24 C
ATOM 19 N6 A A1787 112.186 141.870 89.894 1.00 37.10 N
ATOM 20 N1 A A1787 112.289 142.227 92.168 1.00 37.86 N
ATOM 21 C2 A A1787 112.024 141.807 93.409 1.00 39.05 C
ATOM 22 N3 A A1787 111.447 140.680 93.810 1.00 39.05 N
ATOM 23 C4 A A1787 111.126 139.911 92.753 1.00 39.53 C
ATOM 24 P C A1788 105.363 139.118 92.475 1.00 34.27 P
ATOM 25 OP1 C A1788 103.969 139.158 92.976 1.00 35.24 O
ATOM 26 OP2 C A1788 105.660 138.527 91.152 1.00 32.19 O
ATOM 27 O5' C A1788 105.936 140.597 92.466 1.00 35.10 O
TER
ATOM 1 O3' U B1963 113.985 138.462 104.059 1.00 50.45 O
ATOM 2 P A B1964 112.665 139.293 104.430 1.00 47.66 P
ATOM 3 OP1 A B1964 112.492 139.261 105.903 1.00 45.75 O
ATOM 4 OP2 A B1964 111.566 138.807 103.556 1.00 51.11 O
ATOM 5 O5' A B1964 113.018 140.779 103.974 1.00 47.32 O
ATOM 6 C5' A B1964 114.051 141.537 104.625 1.00 43.52 C
ATOM 7 C4' A B1964 114.569 142.612 103.701 1.00 41.49 C
ATOM 8 O4' A B1964 115.245 141.997 102.574 1.00 41.73 O
ATOM 9 C3' A B1964 113.511 143.488 103.059 1.00 40.82 C
ATOM 10 O3' A B1964 113.084 144.526 103.924 1.00 40.42 O
ATOM 11 C2' A B1964 114.231 144.007 101.821 1.00 41.97 C
ATOM 12 O2' A B1964 115.131 145.059 102.105 1.00 43.39 O
ATOM 13 C1' A B1964 115.022 142.766 101.400 1.00 42.30 C
ATOM 14 N9 A B1964 114.288 141.933 100.446 1.00 43.06 N
ATOM 15 C8 A B1964 113.583 140.785 100.715 1.00 42.76 C
ATOM 16 N7 A B1964 113.001 140.265 99.667 1.00 42.93 N
ATOM 17 C5 A B1964 113.345 141.124 98.634 1.00 42.84 C
ATOM 18 C6 A B1964 113.037 141.121 97.263 1.00 42.42 C
ATOM 19 N6 A B1964 112.281 140.190 96.677 1.00 41.14 N
ATOM 20 N1 A B1964 113.544 142.118 96.504 1.00 42.98 N
ATOM 21 C2 A B1964 114.310 143.044 97.093 1.00 42.71 C
ATOM 22 N3 A B1964 114.673 143.151 98.371 1.00 43.91 N
ATOM 23 C4 A B1964 114.148 142.150 99.098 1.00 42.95 C
ATOM 24 P A B1965 111.581 145.077 103.817 1.00 41.09 P
ATOM 25 OP1 A B1965 111.457 146.322 104.617 1.00 43.50 O
ATOM 26 OP2 A B1965 110.666 143.940 104.095 1.00 42.18 O
ATOM 27 O5' A B1965 111.449 145.501 102.289 1.00 41.26 O
TER
ATOM 2 P A A1787 107.107 133.011 92.476 1.00 35.98 P
ATOM 3 OP1 A A1787 107.449 132.951 91.032 1.00 34.40 O
ATOM 4 OP2 A A1787 107.451 131.871 93.347 1.00 37.03 O
ATOM 5 O5' A A1787 107.806 134.299 93.104 1.00 37.44 O
ATOM 6 C5' A A1787 107.605 135.621 92.550 1.00 35.92 C
ATOM 7 C4' A A1787 108.014 136.663 93.565 1.00 36.61 C
ATOM 8 O4' A A1787 109.469 136.759 93.615 1.00 37.33 O
ATOM 9 C3' A A1787 107.610 138.095 93.283 1.00 35.61 C
ATOM 10 O3' A A1787 106.250 138.347 93.562 1.00 35.17 O
ATOM 11 C2' A A1787 108.549 138.846 94.208 1.00 35.18 C
ATOM 12 O2' A A1787 108.186 138.718 95.564 1.00 34.44 O
ATOM 13 C1' A A1787 109.850 138.089 93.943 1.00 36.23 C
ATOM 14 N9 A A1787 110.457 138.708 92.766 1.00 37.74 N
ATOM 15 C8 A A1787 110.405 138.295 91.460 1.00 35.77 C
ATOM 16 N7 A A1787 110.907 139.160 90.616 1.00 38.61 N
ATOM 17 C5 A A1787 111.353 140.198 91.423 1.00 38.47 C
ATOM 18 C6 A A1787 111.952 141.435 91.131 1.00 37.24 C
ATOM 19 N6 A A1787 112.186 141.870 89.894 1.00 37.10 N
ATOM 20 N1 A A1787 112.289 142.227 92.168 1.00 37.86 N
ATOM 21 C2 A A1787 112.024 141.807 93.409 1.00 39.05 C
ATOM 22 N3 A A1787 111.447 140.680 93.810 1.00 39.05 N
ATOM 23 C4 A A1787 111.126 139.911 92.753 1.00 39.53 C
ATOM 24 P C A1788 105.363 139.118 92.475 1.00 34.27 P
ATOM 25 OP1 C A1788 103.969 139.158 92.976 1.00 35.24 O
ATOM 26 OP2 C A1788 105.660 138.527 91.152 1.00 32.19 O
ATOM 27 O5' C A1788 105.936 140.597 92.466 1.00 35.10 O
TER
ATOM 1 O3' U B1963 113.985 138.462 104.059 1.00 50.45 O
ATOM 2 P A B1964 112.665 139.293 104.430 1.00 47.66 P
ATOM 3 OP1 A B1964 112.492 139.261 105.903 1.00 45.75 O
ATOM 4 OP2 A B1964 111.566 138.807 103.556 1.00 51.11 O
ATOM 5 O5' A B1964 113.018 140.779 103.974 1.00 47.32 O
ATOM 6 C5' A B1964 114.051 141.537 104.625 1.00 43.52 C
ATOM 7 C4' A B1964 114.569 142.612 103.701 1.00 41.49 C
ATOM 8 O4' A B1964 115.245 141.997 102.574 1.00 41.73 O
ATOM 9 C3' A B1964 113.511 143.488 103.059 1.00 40.82 C
ATOM 10 O3' A B1964 113.084 144.526 103.924 1.00 40.42 O
ATOM 11 C2' A B1964 114.231 144.007 101.821 1.00 41.97 C
ATOM 12 O2' A B1964 115.131 145.059 102.105 1.00 43.39 O
ATOM 13 C1' A B1964 115.022 142.766 101.400 1.00 42.30 C
ATOM 14 N9 A B1964 114.288 141.933 100.446 1.00 43.06 N
ATOM 15 C8 A B1964 113.583 140.785 100.715 1.00 42.76 C
ATOM 16 N7 A B1964 113.001 140.265 99.667 1.00 42.93 N
ATOM 17 C5 A B1964 113.345 141.124 98.634 1.00 42.84 C
ATOM 18 C6 A B1964 113.037 141.121 97.263 1.00 42.42 C
ATOM 19 N6 A B1964 112.281 140.190 96.677 1.00 41.14 N
ATOM 20 N1 A B1964 113.544 142.118 96.504 1.00 42.98 N
ATOM 21 C2 A B1964 114.310 143.044 97.093 1.00 42.71 C
ATOM 22 N3 A B1964 114.673 143.151 98.371 1.00 43.91 N
ATOM 23 C4 A B1964 114.148 142.150 99.098 1.00 42.95 C
ATOM 24 P A B1965 111.581 145.077 103.817 1.00 41.09 P
ATOM 25 OP1 A B1965 111.457 146.322 104.617 1.00 43.50 O
ATOM 26 OP2 A B1965 110.666 143.940 104.095 1.00 42.18 O
ATOM 27 O5' A B1965 111.449 145.501 102.289 1.00 41.26 O
TER
Atoms:
OP1: (107.449,132.951,91.032)
OP2: (107.451,131.871,93.347)
C3': (107.610,138.095,93.283)
C1': (109.850,138.089,93.943)
C5': (107.605,135.621,92.550)
O4': (109.469,136.759,93.615)
C8: (110.405,138.295,91.460)
O2': (108.186,138.718,95.564)
C6: (111.952,141.435,91.131)
C5: (111.353,140.198,91.423)
C4: (111.126,139.911,92.753)
P: (107.107,133.011,92.476)
C4': (108.014,136.663,93.565)
C2': (108.549,138.846,94.208)
C2: (112.024,141.807,93.409)
N1: (112.289,142.227,92.168)
N3: (111.447,140.680,93.810)
N6: (112.186,141.870,89.894)
N7: (110.907,139.160,90.616)
N9: (110.457,138.708,92.766)
O5': (107.806,134.299,93.104)
O3': (106.250,138.347,93.562)
OP2: (107.451,131.871,93.347)
C3': (107.610,138.095,93.283)
C1': (109.850,138.089,93.943)
C5': (107.605,135.621,92.550)
O4': (109.469,136.759,93.615)
C8: (110.405,138.295,91.460)
O2': (108.186,138.718,95.564)
C6: (111.952,141.435,91.131)
C5: (111.353,140.198,91.423)
C4: (111.126,139.911,92.753)
P: (107.107,133.011,92.476)
C4': (108.014,136.663,93.565)
C2': (108.549,138.846,94.208)
C2: (112.024,141.807,93.409)
N1: (112.289,142.227,92.168)
N3: (111.447,140.680,93.810)
N6: (112.186,141.870,89.894)
N7: (110.907,139.160,90.616)
N9: (110.457,138.708,92.766)
O5': (107.806,134.299,93.104)
O3': (106.250,138.347,93.562)
OP1: (112.492,139.261,105.903)
OP2: (111.566,138.807,103.556)
C3': (113.511,143.488,103.059)
C1': (115.022,142.766,101.400)
C5': (114.051,141.537,104.625)
O4': (115.245,141.997,102.574)
C8: (113.583,140.785,100.715)
O2': (115.131,145.059,102.105)
C6: (113.037,141.121,97.263)
C5: (113.345,141.124,98.634)
C4: (114.148,142.150,99.098)
P: (112.665,139.293,104.430)
C4': (114.569,142.612,103.701)
C2': (114.231,144.007,101.821)
C2: (114.310,143.044,97.093)
N1: (113.544,142.118,96.504)
N3: (114.673,143.151,98.371)
N6: (112.281,140.190,96.677)
N7: (113.001,140.265,99.667)
N9: (114.288,141.933,100.446)
O5': (113.018,140.779,103.974)
O3': (113.084,144.526,103.924)
OP2: (111.566,138.807,103.556)
C3': (113.511,143.488,103.059)
C1': (115.022,142.766,101.400)
C5': (114.051,141.537,104.625)
O4': (115.245,141.997,102.574)
C8: (113.583,140.785,100.715)
O2': (115.131,145.059,102.105)
C6: (113.037,141.121,97.263)
C5: (113.345,141.124,98.634)
C4: (114.148,142.150,99.098)
P: (112.665,139.293,104.430)
C4': (114.569,142.612,103.701)
C2': (114.231,144.007,101.821)
C2: (114.310,143.044,97.093)
N1: (113.544,142.118,96.504)
N3: (114.673,143.151,98.371)
N6: (112.281,140.190,96.677)
N7: (113.001,140.265,99.667)
N9: (114.288,141.933,100.446)
O5': (113.018,140.779,103.974)
O3': (113.084,144.526,103.924)
Image (generated by PyMOL):