Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1698:A1893
Extra
PDB:
ATOM 1 O3' G A1697 -11.686 119.805 131.572 1.00 0.79 O
ATOM 2 P A A1698 -11.762 120.079 129.988 1.00 12.91 P
ATOM 3 OP1 A A1698 -11.174 121.440 129.813 1.00 12.91 O
ATOM 4 OP2 A A1698 -13.142 119.794 129.484 1.00 12.91 O
ATOM 5 O5' A A1698 -10.741 119.053 129.326 1.00 0.82 O
ATOM 6 C5' A A1698 -9.320 119.236 129.458 1.00 0.82 C
ATOM 7 C4' A A1698 -8.621 117.908 129.325 1.00 0.82 C
ATOM 8 O4' A A1698 -8.229 117.663 127.939 1.00 0.82 O
ATOM 9 C3' A A1698 -7.312 117.794 130.065 1.00 0.82 C
ATOM 10 O3' A A1698 -7.502 117.620 131.457 1.00 0.82 O
ATOM 11 C2' A A1698 -6.643 116.625 129.356 1.00 0.82 C
ATOM 12 O2' A A1698 -7.139 115.384 129.755 1.00 0.82 O
ATOM 13 C1' A A1698 -7.063 116.854 127.911 1.00 0.82 C
ATOM 14 N9 A A1698 -5.971 117.595 127.309 1.00 5.45 N
ATOM 15 C8 A A1698 -5.724 118.930 127.371 1.00 5.45 C
ATOM 16 N7 A A1698 -4.546 119.262 126.913 1.00 5.45 N
ATOM 17 C5 A A1698 -4.010 118.068 126.472 1.00 5.45 C
ATOM 18 C6 A A1698 -2.769 117.739 125.913 1.00 5.45 C
ATOM 19 N6 A A1698 -1.775 118.610 125.733 1.00 5.45 N
ATOM 20 N1 A A1698 -2.561 116.460 125.560 1.00 5.45 N
ATOM 21 C2 A A1698 -3.529 115.579 125.788 1.00 5.45 C
ATOM 22 N3 A A1698 -4.725 115.764 126.336 1.00 5.45 N
ATOM 23 C4 A A1698 -4.900 117.046 126.660 1.00 5.45 C
ATOM 24 P C A1699 -6.498 118.352 132.468 1.00 16.01 P
ATOM 25 OP1 C A1699 -6.746 117.905 133.875 1.00 18.98 O
ATOM 26 OP2 C A1699 -6.552 119.792 132.140 1.00 18.98 O
ATOM 27 O5' C A1699 -5.083 117.808 131.980 1.00 0.79 O
TER
ATOM 1 O3' U B1892 -9.707 107.400 123.433 1.00 14.01 O
ATOM 2 P A B1893 -9.399 106.519 124.738 1.00 13.83 P
ATOM 3 OP1 A B1893 -10.031 105.208 124.514 1.00 35.85 O
ATOM 4 OP2 A B1893 -9.738 107.298 125.971 1.00 35.85 O
ATOM 5 O5' A B1893 -7.815 106.352 124.700 1.00 0.79 O
ATOM 6 C5' A B1893 -7.196 105.375 123.872 1.00 0.79 C
ATOM 7 C4' A B1893 -5.778 105.775 123.568 1.00 0.79 C
ATOM 8 O4' A B1893 -5.787 106.973 122.768 1.00 0.79 O
ATOM 9 C3' A B1893 -4.921 106.110 124.769 1.00 0.79 C
ATOM 10 O3' A B1893 -4.272 104.961 125.249 1.00 0.79 O
ATOM 11 C2' A B1893 -3.894 107.062 124.192 1.00 0.79 C
ATOM 12 O2' A B1893 -2.845 106.355 123.576 1.00 0.79 O
ATOM 13 C1' A B1893 -4.722 107.818 123.155 1.00 0.79 C
ATOM 14 N9 A B1893 -5.313 109.021 123.742 1.00 8.88 N
ATOM 15 C8 A B1893 -6.616 109.205 124.141 1.00 8.88 C
ATOM 16 N7 A B1893 -6.834 110.363 124.708 1.00 8.88 N
ATOM 17 C5 A B1893 -5.600 110.987 124.661 1.00 8.88 C
ATOM 18 C6 A B1893 -5.169 112.222 125.118 1.00 8.88 C
ATOM 19 N6 A B1893 -5.961 113.080 125.753 1.00 8.88 N
ATOM 20 N1 A B1893 -3.882 112.553 124.914 1.00 8.88 N
ATOM 21 C2 A B1893 -3.093 111.680 124.300 1.00 8.88 C
ATOM 22 N3 A B1893 -3.379 110.474 123.831 1.00 8.88 N
ATOM 23 C4 A B1893 -4.664 110.185 124.049 1.00 8.88 C
ATOM 24 P A B1894 -3.918 104.844 126.799 1.00 14.96 P
ATOM 25 OP1 A B1894 -2.926 103.755 126.902 1.00 21.48 O
ATOM 26 OP2 A B1894 -5.203 104.763 127.550 1.00 21.48 O
ATOM 27 O5' A B1894 -3.147 106.192 127.140 1.00 18.34 O
TER
ATOM 2 P A A1698 -11.762 120.079 129.988 1.00 12.91 P
ATOM 3 OP1 A A1698 -11.174 121.440 129.813 1.00 12.91 O
ATOM 4 OP2 A A1698 -13.142 119.794 129.484 1.00 12.91 O
ATOM 5 O5' A A1698 -10.741 119.053 129.326 1.00 0.82 O
ATOM 6 C5' A A1698 -9.320 119.236 129.458 1.00 0.82 C
ATOM 7 C4' A A1698 -8.621 117.908 129.325 1.00 0.82 C
ATOM 8 O4' A A1698 -8.229 117.663 127.939 1.00 0.82 O
ATOM 9 C3' A A1698 -7.312 117.794 130.065 1.00 0.82 C
ATOM 10 O3' A A1698 -7.502 117.620 131.457 1.00 0.82 O
ATOM 11 C2' A A1698 -6.643 116.625 129.356 1.00 0.82 C
ATOM 12 O2' A A1698 -7.139 115.384 129.755 1.00 0.82 O
ATOM 13 C1' A A1698 -7.063 116.854 127.911 1.00 0.82 C
ATOM 14 N9 A A1698 -5.971 117.595 127.309 1.00 5.45 N
ATOM 15 C8 A A1698 -5.724 118.930 127.371 1.00 5.45 C
ATOM 16 N7 A A1698 -4.546 119.262 126.913 1.00 5.45 N
ATOM 17 C5 A A1698 -4.010 118.068 126.472 1.00 5.45 C
ATOM 18 C6 A A1698 -2.769 117.739 125.913 1.00 5.45 C
ATOM 19 N6 A A1698 -1.775 118.610 125.733 1.00 5.45 N
ATOM 20 N1 A A1698 -2.561 116.460 125.560 1.00 5.45 N
ATOM 21 C2 A A1698 -3.529 115.579 125.788 1.00 5.45 C
ATOM 22 N3 A A1698 -4.725 115.764 126.336 1.00 5.45 N
ATOM 23 C4 A A1698 -4.900 117.046 126.660 1.00 5.45 C
ATOM 24 P C A1699 -6.498 118.352 132.468 1.00 16.01 P
ATOM 25 OP1 C A1699 -6.746 117.905 133.875 1.00 18.98 O
ATOM 26 OP2 C A1699 -6.552 119.792 132.140 1.00 18.98 O
ATOM 27 O5' C A1699 -5.083 117.808 131.980 1.00 0.79 O
TER
ATOM 1 O3' U B1892 -9.707 107.400 123.433 1.00 14.01 O
ATOM 2 P A B1893 -9.399 106.519 124.738 1.00 13.83 P
ATOM 3 OP1 A B1893 -10.031 105.208 124.514 1.00 35.85 O
ATOM 4 OP2 A B1893 -9.738 107.298 125.971 1.00 35.85 O
ATOM 5 O5' A B1893 -7.815 106.352 124.700 1.00 0.79 O
ATOM 6 C5' A B1893 -7.196 105.375 123.872 1.00 0.79 C
ATOM 7 C4' A B1893 -5.778 105.775 123.568 1.00 0.79 C
ATOM 8 O4' A B1893 -5.787 106.973 122.768 1.00 0.79 O
ATOM 9 C3' A B1893 -4.921 106.110 124.769 1.00 0.79 C
ATOM 10 O3' A B1893 -4.272 104.961 125.249 1.00 0.79 O
ATOM 11 C2' A B1893 -3.894 107.062 124.192 1.00 0.79 C
ATOM 12 O2' A B1893 -2.845 106.355 123.576 1.00 0.79 O
ATOM 13 C1' A B1893 -4.722 107.818 123.155 1.00 0.79 C
ATOM 14 N9 A B1893 -5.313 109.021 123.742 1.00 8.88 N
ATOM 15 C8 A B1893 -6.616 109.205 124.141 1.00 8.88 C
ATOM 16 N7 A B1893 -6.834 110.363 124.708 1.00 8.88 N
ATOM 17 C5 A B1893 -5.600 110.987 124.661 1.00 8.88 C
ATOM 18 C6 A B1893 -5.169 112.222 125.118 1.00 8.88 C
ATOM 19 N6 A B1893 -5.961 113.080 125.753 1.00 8.88 N
ATOM 20 N1 A B1893 -3.882 112.553 124.914 1.00 8.88 N
ATOM 21 C2 A B1893 -3.093 111.680 124.300 1.00 8.88 C
ATOM 22 N3 A B1893 -3.379 110.474 123.831 1.00 8.88 N
ATOM 23 C4 A B1893 -4.664 110.185 124.049 1.00 8.88 C
ATOM 24 P A B1894 -3.918 104.844 126.799 1.00 14.96 P
ATOM 25 OP1 A B1894 -2.926 103.755 126.902 1.00 21.48 O
ATOM 26 OP2 A B1894 -5.203 104.763 127.550 1.00 21.48 O
ATOM 27 O5' A B1894 -3.147 106.192 127.140 1.00 18.34 O
TER
Atoms:
OP1: (-11.174,121.440,129.813)
OP2: (-13.142,119.794,129.484)
C3': (-7.312,117.794,130.065)
C1': (-7.063,116.854,127.911)
C5': (-9.320,119.236,129.458)
O4': (-8.229,117.663,127.939)
C8: (-5.724,118.930,127.371)
O2': (-7.139,115.384,129.755)
C6: (-2.769,117.739,125.913)
C5: (-4.010,118.068,126.472)
C4: (-4.900,117.046,126.660)
P: (-11.762,120.079,129.988)
C4': (-8.621,117.908,129.325)
C2': (-6.643,116.625,129.356)
C2: (-3.529,115.579,125.788)
N1: (-2.561,116.460,125.560)
N3: (-4.725,115.764,126.336)
N6: (-1.775,118.610,125.733)
N7: (-4.546,119.262,126.913)
N9: (-5.971,117.595,127.309)
O5': (-10.741,119.053,129.326)
O3': (-7.502,117.620,131.457)
OP2: (-13.142,119.794,129.484)
C3': (-7.312,117.794,130.065)
C1': (-7.063,116.854,127.911)
C5': (-9.320,119.236,129.458)
O4': (-8.229,117.663,127.939)
C8: (-5.724,118.930,127.371)
O2': (-7.139,115.384,129.755)
C6: (-2.769,117.739,125.913)
C5: (-4.010,118.068,126.472)
C4: (-4.900,117.046,126.660)
P: (-11.762,120.079,129.988)
C4': (-8.621,117.908,129.325)
C2': (-6.643,116.625,129.356)
C2: (-3.529,115.579,125.788)
N1: (-2.561,116.460,125.560)
N3: (-4.725,115.764,126.336)
N6: (-1.775,118.610,125.733)
N7: (-4.546,119.262,126.913)
N9: (-5.971,117.595,127.309)
O5': (-10.741,119.053,129.326)
O3': (-7.502,117.620,131.457)
OP1: (-10.031,105.208,124.514)
OP2: (-9.738,107.298,125.971)
C3': (-4.921,106.110,124.769)
C1': (-4.722,107.818,123.155)
C5': (-7.196,105.375,123.872)
O4': (-5.787,106.973,122.768)
C8: (-6.616,109.205,124.141)
O2': (-2.845,106.355,123.576)
C6: (-5.169,112.222,125.118)
C5: (-5.600,110.987,124.661)
C4: (-4.664,110.185,124.049)
P: (-9.399,106.519,124.738)
C4': (-5.778,105.775,123.568)
C2': (-3.894,107.062,124.192)
C2: (-3.093,111.680,124.300)
N1: (-3.882,112.553,124.914)
N3: (-3.379,110.474,123.831)
N6: (-5.961,113.080,125.753)
N7: (-6.834,110.363,124.708)
N9: (-5.313,109.021,123.742)
O5': (-7.815,106.352,124.700)
O3': (-4.272,104.961,125.249)
OP2: (-9.738,107.298,125.971)
C3': (-4.921,106.110,124.769)
C1': (-4.722,107.818,123.155)
C5': (-7.196,105.375,123.872)
O4': (-5.787,106.973,122.768)
C8: (-6.616,109.205,124.141)
O2': (-2.845,106.355,123.576)
C6: (-5.169,112.222,125.118)
C5: (-5.600,110.987,124.661)
C4: (-4.664,110.185,124.049)
P: (-9.399,106.519,124.738)
C4': (-5.778,105.775,123.568)
C2': (-3.894,107.062,124.192)
C2: (-3.093,111.680,124.300)
N1: (-3.882,112.553,124.914)
N3: (-3.379,110.474,123.831)
N6: (-5.961,113.080,125.753)
N7: (-6.834,110.363,124.708)
N9: (-5.313,109.021,123.742)
O5': (-7.815,106.352,124.700)
O3': (-4.272,104.961,125.249)
Image (generated by PyMOL):