ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02061:02473

Extra

PDB:
ATOM 1 O3' C A2060 90.335 117.023 75.556 1.00 38.72 O
ATOM 2 P U A2061 91.218 115.935 74.761 1.00 39.98 P
ATOM 3 OP1 U A2061 92.552 116.521 74.523 1.00 39.49 O
ATOM 4 OP2 U A2061 90.440 115.424 73.612 1.00 39.77 O
ATOM 5 O5' U A2061 91.369 114.745 75.806 1.00 38.02 O
ATOM 6 C5' U A2061 91.984 114.965 77.083 1.00 36.76 C
ATOM 7 C4' U A2061 92.106 113.663 77.828 1.00 36.22 C
ATOM 8 O4' U A2061 90.787 113.160 78.143 1.00 37.41 O
ATOM 9 C3' U A2061 92.778 112.542 77.062 1.00 35.68 C
ATOM 10 O3' U A2061 94.194 112.661 77.217 1.00 36.74 O
ATOM 11 C2' U A2061 92.218 111.307 77.754 1.00 36.67 C
ATOM 12 O2' U A2061 92.850 111.088 78.994 1.00 38.39 O
ATOM 13 C1' U A2061 90.786 111.747 78.064 1.00 37.50 C
ATOM 14 N1 U A2061 89.748 111.328 77.103 1.00 37.90 N
ATOM 15 C2 U A2061 89.235 110.046 77.209 1.00 37.07 C
ATOM 16 O2 U A2061 89.621 109.239 78.031 1.00 38.97 O
ATOM 17 N3 U A2061 88.252 109.739 76.305 1.00 35.95 N
ATOM 18 C4 U A2061 87.748 110.551 75.323 1.00 36.08 C
ATOM 19 O4 U A2061 86.891 110.114 74.561 1.00 35.19 O
ATOM 20 C5 U A2061 88.329 111.848 75.269 1.00 37.53 C
ATOM 21 C6 U A2061 89.284 112.185 76.136 1.00 38.26 C
ATOM 22 P U A2062 95.188 112.134 76.064 1.00 37.56 P
ATOM 23 OP1 U A2062 96.553 112.615 76.408 1.00 34.43 O
ATOM 24 OP2 U A2062 94.607 112.468 74.739 1.00 36.86 O
ATOM 25 O5' U A2062 95.169 110.552 76.245 1.00 36.95 O
TER

ATOM 1 O3' U B2472 99.743 109.412 84.062 1.00 37.95 O
ATOM 2 P G B2473 98.984 110.551 84.883 1.00 41.58 P
ATOM 3 OP1 G B2473 99.979 111.612 85.149 1.00 44.22 O
ATOM 4 OP2 G B2473 98.287 109.914 86.013 1.00 42.08 O
ATOM 5 O5' G B2473 97.904 111.119 83.858 1.00 42.52 O
ATOM 6 C5' G B2473 98.310 111.756 82.625 1.00 42.35 C
ATOM 7 C4' G B2473 97.125 111.898 81.697 1.00 41.99 C
ATOM 8 O4' G B2473 96.630 110.582 81.339 1.00 41.75 O
ATOM 9 C3' G B2473 95.925 112.612 82.299 1.00 40.49 C
ATOM 10 O3' G B2473 96.067 114.019 82.149 1.00 39.64 O
ATOM 11 C2' G B2473 94.758 112.048 81.495 1.00 40.16 C
ATOM 12 O2' G B2473 94.609 112.655 80.230 1.00 39.33 O
ATOM 13 C1' G B2473 95.214 110.605 81.273 1.00 40.22 C
ATOM 14 N9 G B2473 94.704 109.629 82.229 1.00 38.64 N
ATOM 15 C8 G B2473 95.217 109.333 83.465 1.00 38.07 C
ATOM 16 N7 G B2473 94.598 108.348 84.052 1.00 38.15 N
ATOM 17 C5 G B2473 93.602 107.986 83.158 1.00 37.43 C
ATOM 18 C6 G B2473 92.628 106.965 83.237 1.00 36.61 C
ATOM 19 O6 G B2473 92.456 106.132 84.137 1.00 38.21 O
ATOM 20 N1 G B2473 91.807 106.957 82.116 1.00 35.00 N
ATOM 21 C2 G B2473 91.916 107.811 81.052 1.00 34.92 C
ATOM 22 N2 G B2473 91.031 107.655 80.066 1.00 34.93 N
ATOM 23 N3 G B2473 92.829 108.753 80.960 1.00 37.82 N
ATOM 24 C4 G B2473 93.636 108.784 82.041 1.00 38.22 C
ATOM 25 P A B2474 95.349 115.006 83.184 1.00 41.25 P
ATOM 26 OP1 A B2474 95.951 116.349 83.031 1.00 40.55 O
ATOM 27 OP2 A B2474 95.362 114.345 84.511 1.00 42.81 O
ATOM 28 O5' A B2474 93.843 115.081 82.677 1.00 39.17 O
TER

Atoms:
C4: (87.748,110.551,75.323)
N3: (88.252,109.739,76.305)
OP1: (92.552,116.521,74.523)
OP2: (90.440,115.424,73.612)
C2: (89.235,110.046,77.209)
C1': (90.786,111.747,78.064)
C3': (92.778,112.542,77.062)
O5': (91.369,114.745,75.806)
O4': (90.787,113.160,78.143)
C5': (91.984,114.965,77.083)
P: (91.218,115.935,74.761)
C4': (92.106,113.663,77.828)
C2': (92.218,111.307,77.754)
O2': (92.850,111.088,78.994)
N1: (89.748,111.328,77.103)
O4: (86.891,110.114,74.561)
O2: (89.621,109.239,78.031)
C6: (89.284,112.185,76.136)
C5: (88.329,111.848,75.269)
O3': (94.194,112.661,77.217)
OP1: (99.979,111.612,85.149)
OP2: (98.287,109.914,86.013)
C3': (95.925,112.612,82.299)
C1': (95.214,110.605,81.273)
C5': (98.310,111.756,82.625)
O6: (92.456,106.132,84.137)
O4': (96.630,110.582,81.339)
C8: (95.217,109.333,83.465)
C2: (91.916,107.811,81.052)
C6: (92.628,106.965,83.237)
C5: (93.602,107.986,83.158)
C4: (93.636,108.784,82.041)
P: (98.984,110.551,84.883)
C4': (97.125,111.898,81.697)
C2': (94.758,112.048,81.495)
O2': (94.609,112.655,80.230)
N1: (91.807,106.957,82.116)
N2: (91.031,107.655,80.066)
N3: (92.829,108.753,80.960)
N7: (94.598,108.348,84.052)
N9: (94.704,109.629,82.229)
O5': (97.904,111.119,83.858)
O3': (96.067,114.019,82.149)
Image (generated by PyMOL):
PyMOL image
show in jmol