Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A540:A1282
Extra
PDB:
ATOM 1 O3' A A 539 0.170 130.357 73.218 1.00 48.16 O
ATOM 2 P A A 540 -0.532 129.045 73.802 1.00 45.64 P
ATOM 3 OP1 A A 540 -1.702 128.763 72.948 1.00 46.24 O
ATOM 4 OP2 A A 540 -0.711 129.236 75.266 1.00 46.21 O
ATOM 5 O5' A A 540 0.531 127.895 73.542 1.00 47.07 O
ATOM 6 C5' A A 540 1.028 127.638 72.216 1.00 48.91 C
ATOM 7 C4' A A 540 2.523 127.408 72.258 1.00 49.48 C
ATOM 8 O4' A A 540 3.171 128.624 72.719 1.00 51.00 O
ATOM 9 C3' A A 540 2.999 126.348 73.241 1.00 48.42 C
ATOM 10 O3' A A 540 2.857 125.032 72.712 1.00 46.15 O
ATOM 11 C2' A A 540 4.442 126.767 73.491 1.00 49.01 C
ATOM 12 O2' A A 540 5.337 126.395 72.465 1.00 48.84 O
ATOM 13 C1' A A 540 4.306 128.291 73.504 1.00 50.78 C
ATOM 14 N9 A A 540 4.099 128.804 74.855 1.00 52.30 N
ATOM 15 C8 A A 540 2.982 128.678 75.645 1.00 53.80 C
ATOM 16 N7 A A 540 3.115 129.198 76.839 1.00 55.04 N
ATOM 17 C5 A A 540 4.405 129.712 76.833 1.00 55.00 C
ATOM 18 C6 A A 540 5.171 130.376 77.818 1.00 54.51 C
ATOM 19 N6 A A 540 4.742 130.630 79.055 1.00 52.23 N
ATOM 20 N1 A A 540 6.418 130.764 77.483 1.00 54.60 N
ATOM 21 C2 A A 540 6.865 130.493 76.250 1.00 54.88 C
ATOM 22 N3 A A 540 6.253 129.866 75.248 1.00 54.34 N
ATOM 23 C4 A A 540 5.013 129.494 75.608 1.00 53.86 C
ATOM 24 P G A 541 2.992 123.751 73.681 1.00 45.91 P
ATOM 25 OP1 G A 541 4.324 123.835 74.308 1.00 46.31 O
ATOM 26 OP2 G A 541 2.633 122.552 72.907 1.00 44.24 O
ATOM 27 O5' G A 541 1.910 123.941 74.842 1.00 44.75 O
TER
ATOM 1 O3' G B1281 14.989 133.832 80.505 1.00 54.38 O
ATOM 2 P G B1282 14.899 132.295 80.957 1.00 57.05 P
ATOM 3 OP1 G B1282 14.885 132.202 82.436 1.00 56.58 O
ATOM 4 OP2 G B1282 15.920 131.567 80.172 1.00 56.00 O
ATOM 5 O5' G B1282 13.491 131.789 80.427 1.00 56.92 O
ATOM 6 C5' G B1282 12.280 132.308 80.973 1.00 55.88 C
ATOM 7 C4' G B1282 11.140 132.004 80.048 1.00 54.15 C
ATOM 8 O4' G B1282 11.496 132.430 78.699 1.00 52.80 O
ATOM 9 C3' G B1282 10.798 130.541 79.805 1.00 53.16 C
ATOM 10 O3' G B1282 10.117 129.902 80.873 1.00 51.80 O
ATOM 11 C2' G B1282 9.895 130.697 78.603 1.00 53.82 C
ATOM 12 O2' G B1282 8.675 131.309 79.000 1.00 54.06 O
ATOM 13 C1' G B1282 10.733 131.671 77.769 1.00 53.37 C
ATOM 14 N9 G B1282 11.630 130.900 76.907 1.00 52.03 N
ATOM 15 C8 G B1282 12.992 130.755 77.000 1.00 52.12 C
ATOM 16 N7 G B1282 13.484 129.943 76.098 1.00 51.40 N
ATOM 17 C5 G B1282 12.382 129.539 75.358 1.00 50.53 C
ATOM 18 C6 G B1282 12.288 128.655 74.246 1.00 49.97 C
ATOM 19 O6 G B1282 13.191 128.032 73.675 1.00 50.21 O
ATOM 20 N1 G B1282 10.972 128.529 73.802 1.00 49.74 N
ATOM 21 C2 G B1282 9.883 129.171 74.351 1.00 50.52 C
ATOM 22 N2 G B1282 8.691 128.920 73.781 1.00 50.70 N
ATOM 23 N3 G B1282 9.960 129.995 75.386 1.00 50.54 N
ATOM 24 C4 G B1282 11.232 130.129 75.835 1.00 51.78 C
ATOM 25 P G B1283 10.156 128.290 80.985 1.00 51.46 P
ATOM 26 OP1 G B1283 9.586 127.932 82.292 1.00 50.76 O
ATOM 27 OP2 G B1283 11.511 127.786 80.606 1.00 51.28 O
ATOM 28 O5' G B1283 9.097 127.782 79.911 1.00 50.52 O
TER
ATOM 2 P A A 540 -0.532 129.045 73.802 1.00 45.64 P
ATOM 3 OP1 A A 540 -1.702 128.763 72.948 1.00 46.24 O
ATOM 4 OP2 A A 540 -0.711 129.236 75.266 1.00 46.21 O
ATOM 5 O5' A A 540 0.531 127.895 73.542 1.00 47.07 O
ATOM 6 C5' A A 540 1.028 127.638 72.216 1.00 48.91 C
ATOM 7 C4' A A 540 2.523 127.408 72.258 1.00 49.48 C
ATOM 8 O4' A A 540 3.171 128.624 72.719 1.00 51.00 O
ATOM 9 C3' A A 540 2.999 126.348 73.241 1.00 48.42 C
ATOM 10 O3' A A 540 2.857 125.032 72.712 1.00 46.15 O
ATOM 11 C2' A A 540 4.442 126.767 73.491 1.00 49.01 C
ATOM 12 O2' A A 540 5.337 126.395 72.465 1.00 48.84 O
ATOM 13 C1' A A 540 4.306 128.291 73.504 1.00 50.78 C
ATOM 14 N9 A A 540 4.099 128.804 74.855 1.00 52.30 N
ATOM 15 C8 A A 540 2.982 128.678 75.645 1.00 53.80 C
ATOM 16 N7 A A 540 3.115 129.198 76.839 1.00 55.04 N
ATOM 17 C5 A A 540 4.405 129.712 76.833 1.00 55.00 C
ATOM 18 C6 A A 540 5.171 130.376 77.818 1.00 54.51 C
ATOM 19 N6 A A 540 4.742 130.630 79.055 1.00 52.23 N
ATOM 20 N1 A A 540 6.418 130.764 77.483 1.00 54.60 N
ATOM 21 C2 A A 540 6.865 130.493 76.250 1.00 54.88 C
ATOM 22 N3 A A 540 6.253 129.866 75.248 1.00 54.34 N
ATOM 23 C4 A A 540 5.013 129.494 75.608 1.00 53.86 C
ATOM 24 P G A 541 2.992 123.751 73.681 1.00 45.91 P
ATOM 25 OP1 G A 541 4.324 123.835 74.308 1.00 46.31 O
ATOM 26 OP2 G A 541 2.633 122.552 72.907 1.00 44.24 O
ATOM 27 O5' G A 541 1.910 123.941 74.842 1.00 44.75 O
TER
ATOM 1 O3' G B1281 14.989 133.832 80.505 1.00 54.38 O
ATOM 2 P G B1282 14.899 132.295 80.957 1.00 57.05 P
ATOM 3 OP1 G B1282 14.885 132.202 82.436 1.00 56.58 O
ATOM 4 OP2 G B1282 15.920 131.567 80.172 1.00 56.00 O
ATOM 5 O5' G B1282 13.491 131.789 80.427 1.00 56.92 O
ATOM 6 C5' G B1282 12.280 132.308 80.973 1.00 55.88 C
ATOM 7 C4' G B1282 11.140 132.004 80.048 1.00 54.15 C
ATOM 8 O4' G B1282 11.496 132.430 78.699 1.00 52.80 O
ATOM 9 C3' G B1282 10.798 130.541 79.805 1.00 53.16 C
ATOM 10 O3' G B1282 10.117 129.902 80.873 1.00 51.80 O
ATOM 11 C2' G B1282 9.895 130.697 78.603 1.00 53.82 C
ATOM 12 O2' G B1282 8.675 131.309 79.000 1.00 54.06 O
ATOM 13 C1' G B1282 10.733 131.671 77.769 1.00 53.37 C
ATOM 14 N9 G B1282 11.630 130.900 76.907 1.00 52.03 N
ATOM 15 C8 G B1282 12.992 130.755 77.000 1.00 52.12 C
ATOM 16 N7 G B1282 13.484 129.943 76.098 1.00 51.40 N
ATOM 17 C5 G B1282 12.382 129.539 75.358 1.00 50.53 C
ATOM 18 C6 G B1282 12.288 128.655 74.246 1.00 49.97 C
ATOM 19 O6 G B1282 13.191 128.032 73.675 1.00 50.21 O
ATOM 20 N1 G B1282 10.972 128.529 73.802 1.00 49.74 N
ATOM 21 C2 G B1282 9.883 129.171 74.351 1.00 50.52 C
ATOM 22 N2 G B1282 8.691 128.920 73.781 1.00 50.70 N
ATOM 23 N3 G B1282 9.960 129.995 75.386 1.00 50.54 N
ATOM 24 C4 G B1282 11.232 130.129 75.835 1.00 51.78 C
ATOM 25 P G B1283 10.156 128.290 80.985 1.00 51.46 P
ATOM 26 OP1 G B1283 9.586 127.932 82.292 1.00 50.76 O
ATOM 27 OP2 G B1283 11.511 127.786 80.606 1.00 51.28 O
ATOM 28 O5' G B1283 9.097 127.782 79.911 1.00 50.52 O
TER
Atoms:
OP1: (-1.702,128.763,72.948)
OP2: (-0.711,129.236,75.266)
C3': (2.999,126.348,73.241)
C1': (4.306,128.291,73.504)
C5': (1.028,127.638,72.216)
O4': (3.171,128.624,72.719)
C8: (2.982,128.678,75.645)
O2': (5.337,126.395,72.465)
C6: (5.171,130.376,77.818)
C5: (4.405,129.712,76.833)
C4: (5.013,129.494,75.608)
P: (-0.532,129.045,73.802)
C4': (2.523,127.408,72.258)
C2': (4.442,126.767,73.491)
C2: (6.865,130.493,76.250)
N1: (6.418,130.764,77.483)
N3: (6.253,129.866,75.248)
N6: (4.742,130.630,79.055)
N7: (3.115,129.198,76.839)
N9: (4.099,128.804,74.855)
O5': (0.531,127.895,73.542)
O3': (2.857,125.032,72.712)
OP2: (-0.711,129.236,75.266)
C3': (2.999,126.348,73.241)
C1': (4.306,128.291,73.504)
C5': (1.028,127.638,72.216)
O4': (3.171,128.624,72.719)
C8: (2.982,128.678,75.645)
O2': (5.337,126.395,72.465)
C6: (5.171,130.376,77.818)
C5: (4.405,129.712,76.833)
C4: (5.013,129.494,75.608)
P: (-0.532,129.045,73.802)
C4': (2.523,127.408,72.258)
C2': (4.442,126.767,73.491)
C2: (6.865,130.493,76.250)
N1: (6.418,130.764,77.483)
N3: (6.253,129.866,75.248)
N6: (4.742,130.630,79.055)
N7: (3.115,129.198,76.839)
N9: (4.099,128.804,74.855)
O5': (0.531,127.895,73.542)
O3': (2.857,125.032,72.712)
OP1: (14.885,132.202,82.436)
OP2: (15.920,131.567,80.172)
C3': (10.798,130.541,79.805)
C1': (10.733,131.671,77.769)
C5': (12.280,132.308,80.973)
O6: (13.191,128.032,73.675)
O4': (11.496,132.430,78.699)
C8: (12.992,130.755,77.000)
C2: (9.883,129.171,74.351)
C6: (12.288,128.655,74.246)
C5: (12.382,129.539,75.358)
C4: (11.232,130.129,75.835)
P: (14.899,132.295,80.957)
C4': (11.140,132.004,80.048)
C2': (9.895,130.697,78.603)
O2': (8.675,131.309,79.000)
N1: (10.972,128.529,73.802)
N2: (8.691,128.920,73.781)
N3: (9.960,129.995,75.386)
N7: (13.484,129.943,76.098)
N9: (11.630,130.900,76.907)
O5': (13.491,131.789,80.427)
O3': (10.117,129.902,80.873)
OP2: (15.920,131.567,80.172)
C3': (10.798,130.541,79.805)
C1': (10.733,131.671,77.769)
C5': (12.280,132.308,80.973)
O6: (13.191,128.032,73.675)
O4': (11.496,132.430,78.699)
C8: (12.992,130.755,77.000)
C2: (9.883,129.171,74.351)
C6: (12.288,128.655,74.246)
C5: (12.382,129.539,75.358)
C4: (11.232,130.129,75.835)
P: (14.899,132.295,80.957)
C4': (11.140,132.004,80.048)
C2': (9.895,130.697,78.603)
O2': (8.675,131.309,79.000)
N1: (10.972,128.529,73.802)
N2: (8.691,128.920,73.781)
N3: (9.960,129.995,75.386)
N7: (13.484,129.943,76.098)
N9: (11.630,130.900,76.907)
O5': (13.491,131.789,80.427)
O3': (10.117,129.902,80.873)
Image (generated by PyMOL):