Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A437:A1308
Extra
PDB:
ATOM 1 O3' G A 436 34.215 119.821 42.891 1.00 39.30 O
ATOM 2 P A A 437 33.546 118.344 42.851 1.00 37.75 P
ATOM 3 OP1 A A 437 34.684 117.389 42.793 1.00 34.69 O
ATOM 4 OP2 A A 437 32.489 118.288 41.813 1.00 40.69 O
ATOM 5 O5' A A 437 32.841 118.168 44.269 1.00 36.12 O
ATOM 6 C5' A A 437 31.787 119.053 44.705 1.00 36.19 C
ATOM 7 C4' A A 437 31.377 118.695 46.120 1.00 36.11 C
ATOM 8 O4' A A 437 31.022 117.299 46.134 1.00 35.51 O
ATOM 9 C3' A A 437 32.482 118.781 47.164 1.00 35.82 C
ATOM 10 O3' A A 437 32.545 120.126 47.659 1.00 35.17 O
ATOM 11 C2' A A 437 32.008 117.807 48.250 1.00 34.84 C
ATOM 12 O2' A A 437 31.155 118.365 49.241 1.00 33.36 O
ATOM 13 C1' A A 437 31.213 116.780 47.434 1.00 34.38 C
ATOM 14 N9 A A 437 31.739 115.419 47.311 1.00 32.21 N
ATOM 15 C8 A A 437 32.977 115.006 46.900 1.00 31.25 C
ATOM 16 N7 A A 437 33.096 113.707 46.804 1.00 29.81 N
ATOM 17 C5 A A 437 31.860 113.229 47.204 1.00 31.60 C
ATOM 18 C6 A A 437 31.335 111.920 47.315 1.00 33.28 C
ATOM 19 N6 A A 437 32.019 110.802 47.001 1.00 33.61 N
ATOM 20 N1 A A 437 30.063 111.793 47.758 1.00 32.38 N
ATOM 21 C2 A A 437 29.373 112.902 48.054 1.00 32.25 C
ATOM 22 N3 A A 437 29.753 114.178 47.979 1.00 31.82 N
ATOM 23 C4 A A 437 31.021 114.271 47.544 1.00 31.32 C
ATOM 24 P C A 438 33.747 121.100 47.222 1.00 34.90 P
ATOM 25 OP1 C A 438 33.140 122.371 46.828 1.00 34.38 O
ATOM 26 OP2 C A 438 34.701 120.450 46.309 1.00 33.48 O
ATOM 27 O5' C A 438 34.511 121.323 48.590 1.00 36.34 O
TER
ATOM 1 O3' A B1307 23.957 104.570 50.826 1.00 42.33 O
ATOM 2 P G B1308 25.457 104.610 51.380 1.00 38.58 P
ATOM 3 OP1 G B1308 26.050 103.318 51.000 1.00 36.83 O
ATOM 4 OP2 G B1308 25.436 105.022 52.800 1.00 37.36 O
ATOM 5 O5' G B1308 26.132 105.791 50.554 1.00 37.70 O
ATOM 6 C5' G B1308 27.166 106.598 51.153 1.00 35.41 C
ATOM 7 C4' G B1308 27.589 107.715 50.229 1.00 34.53 C
ATOM 8 O4' G B1308 26.534 108.706 50.181 1.00 33.96 O
ATOM 9 C3' G B1308 28.799 108.498 50.722 1.00 34.10 C
ATOM 10 O3' G B1308 30.028 107.886 50.352 1.00 36.17 O
ATOM 11 C2' G B1308 28.619 109.840 50.045 1.00 33.96 C
ATOM 12 O2' G B1308 29.002 109.803 48.690 1.00 34.82 O
ATOM 13 C1' G B1308 27.104 109.997 50.126 1.00 33.35 C
ATOM 14 N9 G B1308 26.708 110.732 51.315 1.00 32.49 N
ATOM 15 C8 G B1308 25.988 110.295 52.396 1.00 31.78 C
ATOM 16 N7 G B1308 25.779 111.233 53.278 1.00 31.88 N
ATOM 17 C5 G B1308 26.415 112.343 52.745 1.00 30.89 C
ATOM 18 C6 G B1308 26.531 113.662 53.226 1.00 31.27 C
ATOM 19 O6 G B1308 26.082 114.145 54.260 1.00 33.51 O
ATOM 20 N1 G B1308 27.260 114.465 52.354 1.00 30.89 N
ATOM 21 C2 G B1308 27.808 114.057 51.171 1.00 30.85 C
ATOM 22 N2 G B1308 28.476 114.980 50.481 1.00 31.80 N
ATOM 23 N3 G B1308 27.703 112.835 50.706 1.00 30.88 N
ATOM 24 C4 G B1308 26.996 112.038 51.540 1.00 31.68 C
ATOM 25 P U B1309 31.247 107.869 51.396 1.00 37.30 P
ATOM 26 OP1 U B1309 32.368 107.075 50.811 1.00 36.05 O
ATOM 27 OP2 U B1309 30.653 107.445 52.674 1.00 36.21 O
ATOM 28 O5' U B1309 31.677 109.402 51.526 1.00 37.07 O
TER
ATOM 2 P A A 437 33.546 118.344 42.851 1.00 37.75 P
ATOM 3 OP1 A A 437 34.684 117.389 42.793 1.00 34.69 O
ATOM 4 OP2 A A 437 32.489 118.288 41.813 1.00 40.69 O
ATOM 5 O5' A A 437 32.841 118.168 44.269 1.00 36.12 O
ATOM 6 C5' A A 437 31.787 119.053 44.705 1.00 36.19 C
ATOM 7 C4' A A 437 31.377 118.695 46.120 1.00 36.11 C
ATOM 8 O4' A A 437 31.022 117.299 46.134 1.00 35.51 O
ATOM 9 C3' A A 437 32.482 118.781 47.164 1.00 35.82 C
ATOM 10 O3' A A 437 32.545 120.126 47.659 1.00 35.17 O
ATOM 11 C2' A A 437 32.008 117.807 48.250 1.00 34.84 C
ATOM 12 O2' A A 437 31.155 118.365 49.241 1.00 33.36 O
ATOM 13 C1' A A 437 31.213 116.780 47.434 1.00 34.38 C
ATOM 14 N9 A A 437 31.739 115.419 47.311 1.00 32.21 N
ATOM 15 C8 A A 437 32.977 115.006 46.900 1.00 31.25 C
ATOM 16 N7 A A 437 33.096 113.707 46.804 1.00 29.81 N
ATOM 17 C5 A A 437 31.860 113.229 47.204 1.00 31.60 C
ATOM 18 C6 A A 437 31.335 111.920 47.315 1.00 33.28 C
ATOM 19 N6 A A 437 32.019 110.802 47.001 1.00 33.61 N
ATOM 20 N1 A A 437 30.063 111.793 47.758 1.00 32.38 N
ATOM 21 C2 A A 437 29.373 112.902 48.054 1.00 32.25 C
ATOM 22 N3 A A 437 29.753 114.178 47.979 1.00 31.82 N
ATOM 23 C4 A A 437 31.021 114.271 47.544 1.00 31.32 C
ATOM 24 P C A 438 33.747 121.100 47.222 1.00 34.90 P
ATOM 25 OP1 C A 438 33.140 122.371 46.828 1.00 34.38 O
ATOM 26 OP2 C A 438 34.701 120.450 46.309 1.00 33.48 O
ATOM 27 O5' C A 438 34.511 121.323 48.590 1.00 36.34 O
TER
ATOM 1 O3' A B1307 23.957 104.570 50.826 1.00 42.33 O
ATOM 2 P G B1308 25.457 104.610 51.380 1.00 38.58 P
ATOM 3 OP1 G B1308 26.050 103.318 51.000 1.00 36.83 O
ATOM 4 OP2 G B1308 25.436 105.022 52.800 1.00 37.36 O
ATOM 5 O5' G B1308 26.132 105.791 50.554 1.00 37.70 O
ATOM 6 C5' G B1308 27.166 106.598 51.153 1.00 35.41 C
ATOM 7 C4' G B1308 27.589 107.715 50.229 1.00 34.53 C
ATOM 8 O4' G B1308 26.534 108.706 50.181 1.00 33.96 O
ATOM 9 C3' G B1308 28.799 108.498 50.722 1.00 34.10 C
ATOM 10 O3' G B1308 30.028 107.886 50.352 1.00 36.17 O
ATOM 11 C2' G B1308 28.619 109.840 50.045 1.00 33.96 C
ATOM 12 O2' G B1308 29.002 109.803 48.690 1.00 34.82 O
ATOM 13 C1' G B1308 27.104 109.997 50.126 1.00 33.35 C
ATOM 14 N9 G B1308 26.708 110.732 51.315 1.00 32.49 N
ATOM 15 C8 G B1308 25.988 110.295 52.396 1.00 31.78 C
ATOM 16 N7 G B1308 25.779 111.233 53.278 1.00 31.88 N
ATOM 17 C5 G B1308 26.415 112.343 52.745 1.00 30.89 C
ATOM 18 C6 G B1308 26.531 113.662 53.226 1.00 31.27 C
ATOM 19 O6 G B1308 26.082 114.145 54.260 1.00 33.51 O
ATOM 20 N1 G B1308 27.260 114.465 52.354 1.00 30.89 N
ATOM 21 C2 G B1308 27.808 114.057 51.171 1.00 30.85 C
ATOM 22 N2 G B1308 28.476 114.980 50.481 1.00 31.80 N
ATOM 23 N3 G B1308 27.703 112.835 50.706 1.00 30.88 N
ATOM 24 C4 G B1308 26.996 112.038 51.540 1.00 31.68 C
ATOM 25 P U B1309 31.247 107.869 51.396 1.00 37.30 P
ATOM 26 OP1 U B1309 32.368 107.075 50.811 1.00 36.05 O
ATOM 27 OP2 U B1309 30.653 107.445 52.674 1.00 36.21 O
ATOM 28 O5' U B1309 31.677 109.402 51.526 1.00 37.07 O
TER
Atoms:
OP1: (34.684,117.389,42.793)
OP2: (32.489,118.288,41.813)
C3': (32.482,118.781,47.164)
C1': (31.213,116.780,47.434)
C5': (31.787,119.053,44.705)
O4': (31.022,117.299,46.134)
C8: (32.977,115.006,46.900)
O2': (31.155,118.365,49.241)
C6: (31.335,111.920,47.315)
C5: (31.860,113.229,47.204)
C4: (31.021,114.271,47.544)
P: (33.546,118.344,42.851)
C4': (31.377,118.695,46.120)
C2': (32.008,117.807,48.250)
C2: (29.373,112.902,48.054)
N1: (30.063,111.793,47.758)
N3: (29.753,114.178,47.979)
N6: (32.019,110.802,47.001)
N7: (33.096,113.707,46.804)
N9: (31.739,115.419,47.311)
O5': (32.841,118.168,44.269)
O3': (32.545,120.126,47.659)
OP2: (32.489,118.288,41.813)
C3': (32.482,118.781,47.164)
C1': (31.213,116.780,47.434)
C5': (31.787,119.053,44.705)
O4': (31.022,117.299,46.134)
C8: (32.977,115.006,46.900)
O2': (31.155,118.365,49.241)
C6: (31.335,111.920,47.315)
C5: (31.860,113.229,47.204)
C4: (31.021,114.271,47.544)
P: (33.546,118.344,42.851)
C4': (31.377,118.695,46.120)
C2': (32.008,117.807,48.250)
C2: (29.373,112.902,48.054)
N1: (30.063,111.793,47.758)
N3: (29.753,114.178,47.979)
N6: (32.019,110.802,47.001)
N7: (33.096,113.707,46.804)
N9: (31.739,115.419,47.311)
O5': (32.841,118.168,44.269)
O3': (32.545,120.126,47.659)
OP1: (26.050,103.318,51.000)
OP2: (25.436,105.022,52.800)
C3': (28.799,108.498,50.722)
C1': (27.104,109.997,50.126)
C5': (27.166,106.598,51.153)
O6: (26.082,114.145,54.260)
O4': (26.534,108.706,50.181)
C8: (25.988,110.295,52.396)
C2: (27.808,114.057,51.171)
C6: (26.531,113.662,53.226)
C5: (26.415,112.343,52.745)
C4: (26.996,112.038,51.540)
P: (25.457,104.610,51.380)
C4': (27.589,107.715,50.229)
C2': (28.619,109.840,50.045)
O2': (29.002,109.803,48.690)
N1: (27.260,114.465,52.354)
N2: (28.476,114.980,50.481)
N3: (27.703,112.835,50.706)
N7: (25.779,111.233,53.278)
N9: (26.708,110.732,51.315)
O5': (26.132,105.791,50.554)
O3': (30.028,107.886,50.352)
OP2: (25.436,105.022,52.800)
C3': (28.799,108.498,50.722)
C1': (27.104,109.997,50.126)
C5': (27.166,106.598,51.153)
O6: (26.082,114.145,54.260)
O4': (26.534,108.706,50.181)
C8: (25.988,110.295,52.396)
C2: (27.808,114.057,51.171)
C6: (26.531,113.662,53.226)
C5: (26.415,112.343,52.745)
C4: (26.996,112.038,51.540)
P: (25.457,104.610,51.380)
C4': (27.589,107.715,50.229)
C2': (28.619,109.840,50.045)
O2': (29.002,109.803,48.690)
N1: (27.260,114.465,52.354)
N2: (28.476,114.980,50.481)
N3: (27.703,112.835,50.706)
N7: (25.779,111.233,53.278)
N9: (26.708,110.732,51.315)
O5': (26.132,105.791,50.554)
O3': (30.028,107.886,50.352)
Image (generated by PyMOL):