ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01289:01259

Extra

PDB:
ATOM 1 O3' G A1288 20.862 114.336 77.076 1.00 33.24 O
ATOM 2 P A A1289 20.884 115.637 76.125 1.00 32.24 P
ATOM 3 OP1 A A1289 21.623 116.684 76.878 1.00 32.80 O
ATOM 4 OP2 A A1289 19.520 115.924 75.644 1.00 33.40 O
ATOM 5 O5' A A1289 21.753 115.200 74.864 1.00 30.86 O
ATOM 6 C5' A A1289 23.190 115.261 74.901 1.00 30.77 C
ATOM 7 C4' A A1289 23.768 114.598 73.681 1.00 30.12 C
ATOM 8 O4' A A1289 23.164 113.289 73.567 1.00 29.96 O
ATOM 9 C3' A A1289 23.471 115.257 72.343 1.00 29.08 C
ATOM 10 O3' A A1289 24.453 116.232 72.034 1.00 30.02 O
ATOM 11 C2' A A1289 23.621 114.091 71.378 1.00 29.68 C
ATOM 12 O2' A A1289 24.973 113.791 71.094 1.00 29.39 O
ATOM 13 C1' A A1289 23.053 112.940 72.204 1.00 30.20 C
ATOM 14 N9 A A1289 21.659 112.616 71.920 1.00 30.66 N
ATOM 15 C8 A A1289 20.531 113.340 72.204 1.00 29.70 C
ATOM 16 N7 A A1289 19.423 112.752 71.830 1.00 31.59 N
ATOM 17 C5 A A1289 19.851 111.559 71.257 1.00 32.27 C
ATOM 18 C6 A A1289 19.157 110.470 70.673 1.00 33.06 C
ATOM 19 N6 A A1289 17.825 110.410 70.544 1.00 32.63 N
ATOM 20 N1 A A1289 19.892 109.432 70.215 1.00 32.70 N
ATOM 21 C2 A A1289 21.224 109.493 70.326 1.00 33.36 C
ATOM 22 N3 A A1289 21.985 110.456 70.843 1.00 33.64 N
ATOM 23 C4 A A1289 21.227 111.469 71.301 1.00 32.00 C
ATOM 24 P G A1290 24.064 117.788 71.964 1.00 33.05 P
ATOM 25 OP1 G A1290 25.088 118.441 71.108 1.00 32.55 O
ATOM 26 OP2 G A1290 23.876 118.245 73.349 1.00 34.46 O
ATOM 27 O5' G A1290 22.642 117.869 71.241 1.00 34.17 O
TER

ATOM 1 O3' G B1258 20.807 101.392 64.383 1.00 32.13 O
ATOM 2 P G B1259 21.054 102.703 63.482 1.00 33.80 P
ATOM 3 OP1 G B1259 19.887 102.811 62.570 1.00 35.27 O
ATOM 4 OP2 G B1259 22.430 102.666 62.917 1.00 34.30 O
ATOM 5 O5' G B1259 20.979 103.920 64.504 1.00 32.57 O
ATOM 6 C5' G B1259 19.717 104.358 65.020 1.00 32.83 C
ATOM 7 C4' G B1259 19.906 105.372 66.127 1.00 32.58 C
ATOM 8 O4' G B1259 20.951 104.917 67.028 1.00 33.68 O
ATOM 9 C3' G B1259 20.362 106.778 65.771 1.00 31.00 C
ATOM 10 O3' G B1259 19.295 107.588 65.283 1.00 33.08 O
ATOM 11 C2' G B1259 20.822 107.274 67.131 1.00 31.82 C
ATOM 12 O2' G B1259 19.728 107.561 67.984 1.00 31.63 O
ATOM 13 C1' G B1259 21.550 106.039 67.661 1.00 31.71 C
ATOM 14 N9 G B1259 22.972 106.076 67.323 1.00 30.72 N
ATOM 15 C8 G B1259 23.670 105.221 66.504 1.00 29.53 C
ATOM 16 N7 G B1259 24.922 105.559 66.361 1.00 28.73 N
ATOM 17 C5 G B1259 25.063 106.699 67.139 1.00 28.30 C
ATOM 18 C6 G B1259 26.191 107.530 67.361 1.00 26.66 C
ATOM 19 O6 G B1259 27.323 107.427 66.897 1.00 24.20 O
ATOM 20 N1 G B1259 25.891 108.580 68.215 1.00 27.41 N
ATOM 21 C2 G B1259 24.662 108.810 68.780 1.00 29.94 C
ATOM 22 N2 G B1259 24.554 109.885 69.568 1.00 31.45 N
ATOM 23 N3 G B1259 23.607 108.047 68.582 1.00 30.51 N
ATOM 24 C4 G B1259 23.875 107.020 67.753 1.00 29.99 C
ATOM 25 P C B1260 19.622 108.923 64.437 1.00 33.43 P
ATOM 26 OP1 C B1260 18.342 109.476 63.947 1.00 32.07 O
ATOM 27 OP2 C B1260 20.709 108.614 63.470 1.00 32.59 O
ATOM 28 O5' C B1260 20.190 109.947 65.515 1.00 31.55 O
TER

Atoms:
OP1: (21.623,116.684,76.878)
OP2: (19.520,115.924,75.644)
C3': (23.471,115.257,72.343)
C1': (23.053,112.940,72.204)
C5': (23.190,115.261,74.901)
O4': (23.164,113.289,73.567)
C8: (20.531,113.340,72.204)
O2': (24.973,113.791,71.094)
C6: (19.157,110.470,70.673)
C5: (19.851,111.559,71.257)
C4: (21.227,111.469,71.301)
P: (20.884,115.637,76.125)
C4': (23.768,114.598,73.681)
C2': (23.621,114.091,71.378)
C2: (21.224,109.493,70.326)
N1: (19.892,109.432,70.215)
N3: (21.985,110.456,70.843)
N6: (17.825,110.410,70.544)
N7: (19.423,112.752,71.830)
N9: (21.659,112.616,71.920)
O5': (21.753,115.200,74.864)
O3': (24.453,116.232,72.034)
OP1: (19.887,102.811,62.570)
OP2: (22.430,102.666,62.917)
C3': (20.362,106.778,65.771)
C1': (21.550,106.039,67.661)
C5': (19.717,104.358,65.020)
O6: (27.323,107.427,66.897)
O4': (20.951,104.917,67.028)
C8: (23.670,105.221,66.504)
C2: (24.662,108.810,68.780)
C6: (26.191,107.530,67.361)
C5: (25.063,106.699,67.139)
C4: (23.875,107.020,67.753)
P: (21.054,102.703,63.482)
C4': (19.906,105.372,66.127)
C2': (20.822,107.274,67.131)
O2': (19.728,107.561,67.984)
N1: (25.891,108.580,68.215)
N2: (24.554,109.885,69.568)
N3: (23.607,108.047,68.582)
N7: (24.922,105.559,66.361)
N9: (22.972,106.076,67.323)
O5': (20.979,103.920,64.504)
O3': (19.295,107.588,65.283)
Image (generated by PyMOL):
PyMOL image
show in jmol