ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:088:071

Extra

PDB:
ATOM 1 O3' G A 87 37.215 159.702 17.750 1.00 50.63 O
ATOM 2 P A A 88 38.574 158.943 18.136 1.00 48.90 P
ATOM 3 OP1 A A 88 39.669 159.412 17.244 1.00 48.91 O
ATOM 4 OP2 A A 88 38.272 157.498 18.218 1.00 49.10 O
ATOM 5 O5' A A 88 38.879 159.470 19.603 1.00 47.47 O
ATOM 6 C5' A A 88 39.651 160.663 19.809 1.00 45.32 C
ATOM 7 C4' A A 88 39.438 161.184 21.205 1.00 43.70 C
ATOM 8 O4' A A 88 38.077 161.671 21.336 1.00 43.79 O
ATOM 9 C3' A A 88 39.563 160.145 22.302 1.00 43.15 C
ATOM 10 O3' A A 88 40.911 159.896 22.665 1.00 42.06 O
ATOM 11 C2' A A 88 38.755 160.782 23.416 1.00 44.00 C
ATOM 12 O2' A A 88 39.456 161.838 24.035 1.00 44.98 O
ATOM 13 C1' A A 88 37.581 161.359 22.626 1.00 44.49 C
ATOM 14 N9 A A 88 36.502 160.384 22.473 1.00 46.65 N
ATOM 15 C8 A A 88 36.149 159.688 21.340 1.00 47.24 C
ATOM 16 N7 A A 88 35.151 158.857 21.519 1.00 48.58 N
ATOM 17 C5 A A 88 34.818 159.017 22.858 1.00 48.64 C
ATOM 18 C6 A A 88 33.843 158.406 23.672 1.00 48.90 C
ATOM 19 N6 A A 88 32.989 157.476 23.237 1.00 48.79 N
ATOM 20 N1 A A 88 33.779 158.788 24.967 1.00 50.13 N
ATOM 21 C2 A A 88 34.637 159.719 25.406 1.00 50.41 C
ATOM 22 N3 A A 88 35.596 160.364 24.740 1.00 50.08 N
ATOM 23 C4 A A 88 35.636 159.961 23.456 1.00 48.69 C
ATOM 24 P A A 89 41.386 158.388 22.954 1.00 43.03 P
ATOM 25 OP1 A A 89 42.816 158.454 23.341 1.00 42.60 O
ATOM 26 OP2 A A 89 40.981 157.536 21.810 1.00 42.04 O
ATOM 27 O5' A A 89 40.529 157.954 24.228 1.00 42.90 O
TER

ATOM 1 O3' A B 70 26.917 160.025 25.630 1.00 43.95 O
ATOM 2 P G B 71 26.030 159.761 26.937 1.00 47.35 P
ATOM 3 OP1 G B 71 24.840 158.953 26.543 1.00 46.21 O
ATOM 4 OP2 G B 71 25.845 161.057 27.643 1.00 45.21 O
ATOM 5 O5' G B 71 26.956 158.833 27.837 1.00 47.63 O
ATOM 6 C5' G B 71 28.084 159.372 28.555 1.00 45.95 C
ATOM 7 C4' G B 71 29.364 159.038 27.829 1.00 44.22 C
ATOM 8 O4' G B 71 29.470 159.857 26.630 1.00 43.57 O
ATOM 9 C3' G B 71 30.645 159.329 28.587 1.00 42.45 C
ATOM 10 O3' G B 71 30.957 158.289 29.502 1.00 42.30 O
ATOM 11 C2' G B 71 31.641 159.486 27.449 1.00 41.87 C
ATOM 12 O2' G B 71 31.973 158.257 26.832 1.00 40.12 O
ATOM 13 C1' G B 71 30.807 160.318 26.478 1.00 41.73 C
ATOM 14 N9 G B 71 30.843 161.727 26.864 1.00 40.62 N
ATOM 15 C8 G B 71 29.794 162.494 27.316 1.00 40.01 C
ATOM 16 N7 G B 71 30.147 163.709 27.633 1.00 39.01 N
ATOM 17 C5 G B 71 31.508 163.753 27.364 1.00 39.66 C
ATOM 18 C6 G B 71 32.446 164.812 27.519 1.00 40.12 C
ATOM 19 O6 G B 71 32.254 165.957 27.950 1.00 42.88 O
ATOM 20 N1 G B 71 33.721 164.428 27.118 1.00 38.77 N
ATOM 21 C2 G B 71 34.055 163.189 26.636 1.00 40.00 C
ATOM 22 N2 G B 71 35.339 163.011 26.298 1.00 40.61 N
ATOM 23 N3 G B 71 33.194 162.194 26.494 1.00 40.39 N
ATOM 24 C4 G B 71 31.949 162.544 26.874 1.00 39.95 C
ATOM 25 P C B 72 31.462 158.659 30.982 1.00 40.64 P
ATOM 26 OP1 C B 72 31.376 157.436 31.823 1.00 40.66 O
ATOM 27 OP2 C B 72 30.750 159.894 31.400 1.00 38.98 O
ATOM 28 O5' C B 72 33.005 158.976 30.774 1.00 40.36 O
TER

Atoms:
OP1: (39.669,159.412,17.244)
OP2: (38.272,157.498,18.218)
C3': (39.563,160.145,22.302)
C1': (37.581,161.359,22.626)
C5': (39.651,160.663,19.809)
O4': (38.077,161.671,21.336)
C8: (36.149,159.688,21.340)
O2': (39.456,161.838,24.035)
C6: (33.843,158.406,23.672)
C5: (34.818,159.017,22.858)
C4: (35.636,159.961,23.456)
P: (38.574,158.943,18.136)
C4': (39.438,161.184,21.205)
C2': (38.755,160.782,23.416)
C2: (34.637,159.719,25.406)
N1: (33.779,158.788,24.967)
N3: (35.596,160.364,24.740)
N6: (32.989,157.476,23.237)
N7: (35.151,158.857,21.519)
N9: (36.502,160.384,22.473)
O5': (38.879,159.470,19.603)
O3': (40.911,159.896,22.665)
OP1: (24.840,158.953,26.543)
OP2: (25.845,161.057,27.643)
C3': (30.645,159.329,28.587)
C1': (30.807,160.318,26.478)
C5': (28.084,159.372,28.555)
O6: (32.254,165.957,27.950)
O4': (29.470,159.857,26.630)
C8: (29.794,162.494,27.316)
C2: (34.055,163.189,26.636)
C6: (32.446,164.812,27.519)
C5: (31.508,163.753,27.364)
C4: (31.949,162.544,26.874)
P: (26.030,159.761,26.937)
C4': (29.364,159.038,27.829)
C2': (31.641,159.486,27.449)
O2': (31.973,158.257,26.832)
N1: (33.721,164.428,27.118)
N2: (35.339,163.011,26.298)
N3: (33.194,162.194,26.494)
N7: (30.147,163.709,27.633)
N9: (30.843,161.727,26.864)
O5': (26.956,158.833,27.837)
O3': (30.957,158.289,29.502)
Image (generated by PyMOL):
PyMOL image
show in jmol