Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02655:02503
Extra
PDB:
ATOM 1 O3' G A2654 19.659 139.739 127.795 1.00 43.33 O
ATOM 2 P A A2655 19.297 141.119 127.061 1.00 48.20 P
ATOM 3 OP1 A A2655 19.257 142.170 128.121 1.00 48.32 O
ATOM 4 OP2 A A2655 18.090 140.871 126.226 1.00 47.01 O
ATOM 5 O5' A A2655 20.538 141.406 126.099 1.00 45.53 O
ATOM 6 C5' A A2655 21.832 141.743 126.636 1.00 44.47 C
ATOM 7 C4' A A2655 22.637 142.520 125.621 1.00 44.38 C
ATOM 8 O4' A A2655 22.853 141.695 124.453 1.00 43.89 O
ATOM 9 C3' A A2655 21.984 143.785 125.087 1.00 44.00 C
ATOM 10 O3' A A2655 22.287 144.885 125.935 1.00 43.86 O
ATOM 11 C2' A A2655 22.643 143.955 123.727 1.00 43.99 C
ATOM 12 O2' A A2655 23.909 144.575 123.798 1.00 45.06 O
ATOM 13 C1' A A2655 22.816 142.499 123.293 1.00 43.81 C
ATOM 14 N9 A A2655 21.729 142.015 122.456 1.00 44.08 N
ATOM 15 C8 A A2655 20.588 141.367 122.846 1.00 43.45 C
ATOM 16 N7 A A2655 19.797 141.051 121.852 1.00 45.96 N
ATOM 17 C5 A A2655 20.465 141.527 120.730 1.00 45.22 C
ATOM 18 C6 A A2655 20.151 141.506 119.362 1.00 44.50 C
ATOM 19 N6 A A2655 19.033 140.978 118.869 1.00 45.01 N
ATOM 20 N1 A A2655 21.035 142.058 118.508 1.00 44.45 N
ATOM 21 C2 A A2655 22.151 142.598 119.003 1.00 45.28 C
ATOM 22 N3 A A2655 22.555 142.685 120.265 1.00 45.07 N
ATOM 23 C4 A A2655 21.656 142.122 121.089 1.00 44.95 C
ATOM 24 P G A2656 21.201 146.032 126.176 1.00 41.96 P
ATOM 25 OP1 G A2656 19.961 145.603 125.492 1.00 40.88 O
ATOM 26 OP2 G A2656 21.833 147.318 125.818 1.00 41.67 O
ATOM 27 O5' G A2656 20.959 146.015 127.754 1.00 42.34 O
TER
ATOM 1 O3' U B2502 20.748 148.693 111.402 1.00 45.61 O
ATOM 2 P G B2503 19.793 148.940 112.672 1.00 47.58 P
ATOM 3 OP1 G B2503 18.402 148.772 112.183 1.00 47.42 O
ATOM 4 OP2 G B2503 20.183 150.192 113.367 1.00 43.61 O
ATOM 5 O5' G B2503 20.112 147.708 113.627 1.00 45.99 O
ATOM 6 C5' G B2503 19.785 146.373 113.212 1.00 46.63 C
ATOM 7 C4' G B2503 20.199 145.379 114.264 1.00 47.29 C
ATOM 8 O4' G B2503 21.636 145.444 114.452 1.00 48.38 O
ATOM 9 C3' G B2503 19.642 145.609 115.657 1.00 46.11 C
ATOM 10 O3' G B2503 18.324 145.099 115.767 1.00 45.46 O
ATOM 11 C2' G B2503 20.632 144.835 116.513 1.00 46.04 C
ATOM 12 O2' G B2503 20.422 143.440 116.412 1.00 44.93 O
ATOM 13 C1' G B2503 21.947 145.175 115.810 1.00 46.14 C
ATOM 14 N9 G B2503 22.624 146.345 116.360 1.00 44.81 N
ATOM 15 C8 G B2503 22.661 147.611 115.824 1.00 44.70 C
ATOM 16 N7 G B2503 23.363 148.448 116.538 1.00 44.49 N
ATOM 17 C5 G B2503 23.816 147.690 117.610 1.00 44.69 C
ATOM 18 C6 G B2503 24.628 148.051 118.711 1.00 43.83 C
ATOM 19 O6 G B2503 25.145 149.144 118.963 1.00 47.36 O
ATOM 20 N1 G B2503 24.829 146.981 119.571 1.00 41.98 N
ATOM 21 C2 G B2503 24.330 145.723 119.397 1.00 42.44 C
ATOM 22 N2 G B2503 24.643 144.830 120.349 1.00 41.89 N
ATOM 23 N3 G B2503 23.580 145.364 118.368 1.00 44.01 N
ATOM 24 C4 G B2503 23.362 146.393 117.520 1.00 44.71 C
ATOM 25 P U B2504 17.255 145.853 116.697 1.00 45.66 P
ATOM 26 OP1 U B2504 15.992 145.065 116.604 1.00 44.12 O
ATOM 27 OP2 U B2504 17.242 147.298 116.354 1.00 44.93 O
ATOM 28 O5' U B2504 17.860 145.702 118.165 1.00 44.30 O
TER
ATOM 2 P A A2655 19.297 141.119 127.061 1.00 48.20 P
ATOM 3 OP1 A A2655 19.257 142.170 128.121 1.00 48.32 O
ATOM 4 OP2 A A2655 18.090 140.871 126.226 1.00 47.01 O
ATOM 5 O5' A A2655 20.538 141.406 126.099 1.00 45.53 O
ATOM 6 C5' A A2655 21.832 141.743 126.636 1.00 44.47 C
ATOM 7 C4' A A2655 22.637 142.520 125.621 1.00 44.38 C
ATOM 8 O4' A A2655 22.853 141.695 124.453 1.00 43.89 O
ATOM 9 C3' A A2655 21.984 143.785 125.087 1.00 44.00 C
ATOM 10 O3' A A2655 22.287 144.885 125.935 1.00 43.86 O
ATOM 11 C2' A A2655 22.643 143.955 123.727 1.00 43.99 C
ATOM 12 O2' A A2655 23.909 144.575 123.798 1.00 45.06 O
ATOM 13 C1' A A2655 22.816 142.499 123.293 1.00 43.81 C
ATOM 14 N9 A A2655 21.729 142.015 122.456 1.00 44.08 N
ATOM 15 C8 A A2655 20.588 141.367 122.846 1.00 43.45 C
ATOM 16 N7 A A2655 19.797 141.051 121.852 1.00 45.96 N
ATOM 17 C5 A A2655 20.465 141.527 120.730 1.00 45.22 C
ATOM 18 C6 A A2655 20.151 141.506 119.362 1.00 44.50 C
ATOM 19 N6 A A2655 19.033 140.978 118.869 1.00 45.01 N
ATOM 20 N1 A A2655 21.035 142.058 118.508 1.00 44.45 N
ATOM 21 C2 A A2655 22.151 142.598 119.003 1.00 45.28 C
ATOM 22 N3 A A2655 22.555 142.685 120.265 1.00 45.07 N
ATOM 23 C4 A A2655 21.656 142.122 121.089 1.00 44.95 C
ATOM 24 P G A2656 21.201 146.032 126.176 1.00 41.96 P
ATOM 25 OP1 G A2656 19.961 145.603 125.492 1.00 40.88 O
ATOM 26 OP2 G A2656 21.833 147.318 125.818 1.00 41.67 O
ATOM 27 O5' G A2656 20.959 146.015 127.754 1.00 42.34 O
TER
ATOM 1 O3' U B2502 20.748 148.693 111.402 1.00 45.61 O
ATOM 2 P G B2503 19.793 148.940 112.672 1.00 47.58 P
ATOM 3 OP1 G B2503 18.402 148.772 112.183 1.00 47.42 O
ATOM 4 OP2 G B2503 20.183 150.192 113.367 1.00 43.61 O
ATOM 5 O5' G B2503 20.112 147.708 113.627 1.00 45.99 O
ATOM 6 C5' G B2503 19.785 146.373 113.212 1.00 46.63 C
ATOM 7 C4' G B2503 20.199 145.379 114.264 1.00 47.29 C
ATOM 8 O4' G B2503 21.636 145.444 114.452 1.00 48.38 O
ATOM 9 C3' G B2503 19.642 145.609 115.657 1.00 46.11 C
ATOM 10 O3' G B2503 18.324 145.099 115.767 1.00 45.46 O
ATOM 11 C2' G B2503 20.632 144.835 116.513 1.00 46.04 C
ATOM 12 O2' G B2503 20.422 143.440 116.412 1.00 44.93 O
ATOM 13 C1' G B2503 21.947 145.175 115.810 1.00 46.14 C
ATOM 14 N9 G B2503 22.624 146.345 116.360 1.00 44.81 N
ATOM 15 C8 G B2503 22.661 147.611 115.824 1.00 44.70 C
ATOM 16 N7 G B2503 23.363 148.448 116.538 1.00 44.49 N
ATOM 17 C5 G B2503 23.816 147.690 117.610 1.00 44.69 C
ATOM 18 C6 G B2503 24.628 148.051 118.711 1.00 43.83 C
ATOM 19 O6 G B2503 25.145 149.144 118.963 1.00 47.36 O
ATOM 20 N1 G B2503 24.829 146.981 119.571 1.00 41.98 N
ATOM 21 C2 G B2503 24.330 145.723 119.397 1.00 42.44 C
ATOM 22 N2 G B2503 24.643 144.830 120.349 1.00 41.89 N
ATOM 23 N3 G B2503 23.580 145.364 118.368 1.00 44.01 N
ATOM 24 C4 G B2503 23.362 146.393 117.520 1.00 44.71 C
ATOM 25 P U B2504 17.255 145.853 116.697 1.00 45.66 P
ATOM 26 OP1 U B2504 15.992 145.065 116.604 1.00 44.12 O
ATOM 27 OP2 U B2504 17.242 147.298 116.354 1.00 44.93 O
ATOM 28 O5' U B2504 17.860 145.702 118.165 1.00 44.30 O
TER
Atoms:
OP1: (19.257,142.170,128.121)
OP2: (18.090,140.871,126.226)
C3': (21.984,143.785,125.087)
C1': (22.816,142.499,123.293)
C5': (21.832,141.743,126.636)
O4': (22.853,141.695,124.453)
C8: (20.588,141.367,122.846)
O2': (23.909,144.575,123.798)
C6: (20.151,141.506,119.362)
C5: (20.465,141.527,120.730)
C4: (21.656,142.122,121.089)
P: (19.297,141.119,127.061)
C4': (22.637,142.520,125.621)
C2': (22.643,143.955,123.727)
C2: (22.151,142.598,119.003)
N1: (21.035,142.058,118.508)
N3: (22.555,142.685,120.265)
N6: (19.033,140.978,118.869)
N7: (19.797,141.051,121.852)
N9: (21.729,142.015,122.456)
O5': (20.538,141.406,126.099)
O3': (22.287,144.885,125.935)
OP2: (18.090,140.871,126.226)
C3': (21.984,143.785,125.087)
C1': (22.816,142.499,123.293)
C5': (21.832,141.743,126.636)
O4': (22.853,141.695,124.453)
C8: (20.588,141.367,122.846)
O2': (23.909,144.575,123.798)
C6: (20.151,141.506,119.362)
C5: (20.465,141.527,120.730)
C4: (21.656,142.122,121.089)
P: (19.297,141.119,127.061)
C4': (22.637,142.520,125.621)
C2': (22.643,143.955,123.727)
C2: (22.151,142.598,119.003)
N1: (21.035,142.058,118.508)
N3: (22.555,142.685,120.265)
N6: (19.033,140.978,118.869)
N7: (19.797,141.051,121.852)
N9: (21.729,142.015,122.456)
O5': (20.538,141.406,126.099)
O3': (22.287,144.885,125.935)
OP1: (18.402,148.772,112.183)
OP2: (20.183,150.192,113.367)
C3': (19.642,145.609,115.657)
C1': (21.947,145.175,115.810)
C5': (19.785,146.373,113.212)
O6: (25.145,149.144,118.963)
O4': (21.636,145.444,114.452)
C8: (22.661,147.611,115.824)
C2: (24.330,145.723,119.397)
C6: (24.628,148.051,118.711)
C5: (23.816,147.690,117.610)
C4: (23.362,146.393,117.520)
P: (19.793,148.940,112.672)
C4': (20.199,145.379,114.264)
C2': (20.632,144.835,116.513)
O2': (20.422,143.440,116.412)
N1: (24.829,146.981,119.571)
N2: (24.643,144.830,120.349)
N3: (23.580,145.364,118.368)
N7: (23.363,148.448,116.538)
N9: (22.624,146.345,116.360)
O5': (20.112,147.708,113.627)
O3': (18.324,145.099,115.767)
OP2: (20.183,150.192,113.367)
C3': (19.642,145.609,115.657)
C1': (21.947,145.175,115.810)
C5': (19.785,146.373,113.212)
O6: (25.145,149.144,118.963)
O4': (21.636,145.444,114.452)
C8: (22.661,147.611,115.824)
C2: (24.330,145.723,119.397)
C6: (24.628,148.051,118.711)
C5: (23.816,147.690,117.610)
C4: (23.362,146.393,117.520)
P: (19.793,148.940,112.672)
C4': (20.199,145.379,114.264)
C2': (20.632,144.835,116.513)
O2': (20.422,143.440,116.412)
N1: (24.829,146.981,119.571)
N2: (24.643,144.830,120.349)
N3: (23.580,145.364,118.368)
N7: (23.363,148.448,116.538)
N9: (22.624,146.345,116.360)
O5': (20.112,147.708,113.627)
O3': (18.324,145.099,115.767)
Image (generated by PyMOL):