Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B43:B8
Extra
PDB:
ATOM 1 O3' A A 42 -7.986 49.153 -7.925 1.00 27.31 O
ATOM 2 P A A 43 -9.049 49.151 -6.727 1.00 31.35 P
ATOM 3 OP1 A A 43 -9.292 50.557 -6.334 1.00 31.75 O
ATOM 4 OP2 A A 43 -8.586 48.175 -5.717 1.00 28.78 O
ATOM 5 O5' A A 43 -10.384 48.604 -7.414 1.00 32.79 O
ATOM 6 C5' A A 43 -10.500 47.218 -7.701 1.00 28.81 C
ATOM 7 C4' A A 43 -11.932 46.758 -7.507 1.00 30.47 C
ATOM 8 O4' A A 43 -12.798 47.472 -8.420 1.00 30.80 O
ATOM 9 C3' A A 43 -12.176 45.287 -7.804 1.00 26.84 C
ATOM 10 O3' A A 43 -11.910 44.525 -6.640 1.00 26.54 O
ATOM 11 C2' A A 43 -13.664 45.287 -8.127 1.00 29.48 C
ATOM 12 O2' A A 43 -14.458 45.296 -6.956 1.00 29.23 O
ATOM 13 C1' A A 43 -13.835 46.615 -8.859 1.00 31.59 C
ATOM 14 N9 A A 43 -13.774 46.546 -10.317 1.00 31.33 N
ATOM 15 C8 A A 43 -12.804 47.083 -11.117 1.00 33.25 C
ATOM 16 N7 A A 43 -13.000 46.879 -12.398 1.00 30.18 N
ATOM 17 C5 A A 43 -14.185 46.167 -12.442 1.00 27.37 C
ATOM 18 C6 A A 43 -14.932 45.649 -13.516 1.00 29.40 C
ATOM 19 N6 A A 43 -14.563 45.789 -14.792 1.00 27.66 N
ATOM 20 N1 A A 43 -16.068 44.984 -13.224 1.00 29.31 N
ATOM 21 C2 A A 43 -16.425 44.853 -11.941 1.00 29.92 C
ATOM 22 N3 A A 43 -15.803 45.294 -10.847 1.00 31.23 N
ATOM 23 C4 A A 43 -14.678 45.952 -11.170 1.00 31.14 C
ATOM 24 P C A 44 -10.725 43.452 -6.613 1.00 29.20 P
ATOM 25 OP1 C A 44 -10.810 42.686 -5.351 1.00 32.61 O
ATOM 26 OP2 C A 44 -9.469 44.138 -6.994 1.00 30.71 O
ATOM 27 O5' C A 44 -11.145 42.458 -7.778 1.00 32.24 O
TER
ATOM 1 O3' G B 7 -25.166 42.890 -15.908 1.00 44.16 O
ATOM 2 P G B 8 -24.451 41.585 -15.326 1.00 47.77 P
ATOM 3 OP1 G B 8 -24.328 40.593 -16.419 1.00 44.51 O
ATOM 4 OP2 G B 8 -25.120 41.212 -14.059 1.00 44.24 O
ATOM 5 O5' G B 8 -22.992 42.145 -14.992 1.00 42.86 O
ATOM 6 C5' G B 8 -22.241 42.804 -16.003 1.00 38.20 C
ATOM 7 C4' G B 8 -20.939 43.318 -15.423 1.00 36.80 C
ATOM 8 O4' G B 8 -21.214 44.409 -14.508 1.00 37.92 O
ATOM 9 C3' G B 8 -20.185 42.310 -14.569 1.00 38.60 C
ATOM 10 O3' G B 8 -19.430 41.422 -15.378 1.00 36.71 O
ATOM 11 C2' G B 8 -19.294 43.254 -13.774 1.00 35.16 C
ATOM 12 O2' G B 8 -18.249 43.793 -14.556 1.00 31.68 O
ATOM 13 C1' G B 8 -20.301 44.344 -13.428 1.00 37.89 C
ATOM 14 N9 G B 8 -21.030 44.050 -12.200 1.00 32.99 N
ATOM 15 C8 G B 8 -22.338 43.653 -12.070 1.00 38.64 C
ATOM 16 N7 G B 8 -22.700 43.463 -10.830 1.00 40.53 N
ATOM 17 C5 G B 8 -21.559 43.751 -10.092 1.00 36.77 C
ATOM 18 C6 G B 8 -21.338 43.723 -8.693 1.00 40.13 C
ATOM 19 O6 G B 8 -22.136 43.427 -7.792 1.00 40.91 O
ATOM 20 N1 G B 8 -20.031 44.085 -8.372 1.00 36.98 N
ATOM 21 C2 G B 8 -19.064 44.432 -9.287 1.00 37.18 C
ATOM 22 N2 G B 8 -17.859 44.753 -8.796 1.00 34.90 N
ATOM 23 N3 G B 8 -19.259 44.462 -10.596 1.00 37.39 N
ATOM 24 C4 G B 8 -20.524 44.111 -10.924 1.00 36.57 C
ATOM 25 P G B 9 -19.192 39.913 -14.906 1.00 43.18 P
ATOM 26 OP1 G B 9 -18.437 39.240 -15.986 1.00 36.28 O
ATOM 27 OP2 G B 9 -20.485 39.360 -14.438 1.00 37.47 O
ATOM 28 O5' G B 9 -18.220 40.063 -13.643 1.00 34.58 O
TER
ATOM 2 P A A 43 -9.049 49.151 -6.727 1.00 31.35 P
ATOM 3 OP1 A A 43 -9.292 50.557 -6.334 1.00 31.75 O
ATOM 4 OP2 A A 43 -8.586 48.175 -5.717 1.00 28.78 O
ATOM 5 O5' A A 43 -10.384 48.604 -7.414 1.00 32.79 O
ATOM 6 C5' A A 43 -10.500 47.218 -7.701 1.00 28.81 C
ATOM 7 C4' A A 43 -11.932 46.758 -7.507 1.00 30.47 C
ATOM 8 O4' A A 43 -12.798 47.472 -8.420 1.00 30.80 O
ATOM 9 C3' A A 43 -12.176 45.287 -7.804 1.00 26.84 C
ATOM 10 O3' A A 43 -11.910 44.525 -6.640 1.00 26.54 O
ATOM 11 C2' A A 43 -13.664 45.287 -8.127 1.00 29.48 C
ATOM 12 O2' A A 43 -14.458 45.296 -6.956 1.00 29.23 O
ATOM 13 C1' A A 43 -13.835 46.615 -8.859 1.00 31.59 C
ATOM 14 N9 A A 43 -13.774 46.546 -10.317 1.00 31.33 N
ATOM 15 C8 A A 43 -12.804 47.083 -11.117 1.00 33.25 C
ATOM 16 N7 A A 43 -13.000 46.879 -12.398 1.00 30.18 N
ATOM 17 C5 A A 43 -14.185 46.167 -12.442 1.00 27.37 C
ATOM 18 C6 A A 43 -14.932 45.649 -13.516 1.00 29.40 C
ATOM 19 N6 A A 43 -14.563 45.789 -14.792 1.00 27.66 N
ATOM 20 N1 A A 43 -16.068 44.984 -13.224 1.00 29.31 N
ATOM 21 C2 A A 43 -16.425 44.853 -11.941 1.00 29.92 C
ATOM 22 N3 A A 43 -15.803 45.294 -10.847 1.00 31.23 N
ATOM 23 C4 A A 43 -14.678 45.952 -11.170 1.00 31.14 C
ATOM 24 P C A 44 -10.725 43.452 -6.613 1.00 29.20 P
ATOM 25 OP1 C A 44 -10.810 42.686 -5.351 1.00 32.61 O
ATOM 26 OP2 C A 44 -9.469 44.138 -6.994 1.00 30.71 O
ATOM 27 O5' C A 44 -11.145 42.458 -7.778 1.00 32.24 O
TER
ATOM 1 O3' G B 7 -25.166 42.890 -15.908 1.00 44.16 O
ATOM 2 P G B 8 -24.451 41.585 -15.326 1.00 47.77 P
ATOM 3 OP1 G B 8 -24.328 40.593 -16.419 1.00 44.51 O
ATOM 4 OP2 G B 8 -25.120 41.212 -14.059 1.00 44.24 O
ATOM 5 O5' G B 8 -22.992 42.145 -14.992 1.00 42.86 O
ATOM 6 C5' G B 8 -22.241 42.804 -16.003 1.00 38.20 C
ATOM 7 C4' G B 8 -20.939 43.318 -15.423 1.00 36.80 C
ATOM 8 O4' G B 8 -21.214 44.409 -14.508 1.00 37.92 O
ATOM 9 C3' G B 8 -20.185 42.310 -14.569 1.00 38.60 C
ATOM 10 O3' G B 8 -19.430 41.422 -15.378 1.00 36.71 O
ATOM 11 C2' G B 8 -19.294 43.254 -13.774 1.00 35.16 C
ATOM 12 O2' G B 8 -18.249 43.793 -14.556 1.00 31.68 O
ATOM 13 C1' G B 8 -20.301 44.344 -13.428 1.00 37.89 C
ATOM 14 N9 G B 8 -21.030 44.050 -12.200 1.00 32.99 N
ATOM 15 C8 G B 8 -22.338 43.653 -12.070 1.00 38.64 C
ATOM 16 N7 G B 8 -22.700 43.463 -10.830 1.00 40.53 N
ATOM 17 C5 G B 8 -21.559 43.751 -10.092 1.00 36.77 C
ATOM 18 C6 G B 8 -21.338 43.723 -8.693 1.00 40.13 C
ATOM 19 O6 G B 8 -22.136 43.427 -7.792 1.00 40.91 O
ATOM 20 N1 G B 8 -20.031 44.085 -8.372 1.00 36.98 N
ATOM 21 C2 G B 8 -19.064 44.432 -9.287 1.00 37.18 C
ATOM 22 N2 G B 8 -17.859 44.753 -8.796 1.00 34.90 N
ATOM 23 N3 G B 8 -19.259 44.462 -10.596 1.00 37.39 N
ATOM 24 C4 G B 8 -20.524 44.111 -10.924 1.00 36.57 C
ATOM 25 P G B 9 -19.192 39.913 -14.906 1.00 43.18 P
ATOM 26 OP1 G B 9 -18.437 39.240 -15.986 1.00 36.28 O
ATOM 27 OP2 G B 9 -20.485 39.360 -14.438 1.00 37.47 O
ATOM 28 O5' G B 9 -18.220 40.063 -13.643 1.00 34.58 O
TER
Atoms:
OP1: (-9.292,50.557,-6.334)
OP2: (-8.586,48.175,-5.717)
C3': (-12.176,45.287,-7.804)
C1': (-13.835,46.615,-8.859)
C5': (-10.500,47.218,-7.701)
O4': (-12.798,47.472,-8.420)
C8: (-12.804,47.083,-11.117)
O2': (-14.458,45.296,-6.956)
C6: (-14.932,45.649,-13.516)
C5: (-14.185,46.167,-12.442)
C4: (-14.678,45.952,-11.170)
P: (-9.049,49.151,-6.727)
C4': (-11.932,46.758,-7.507)
C2': (-13.664,45.287,-8.127)
C2: (-16.425,44.853,-11.941)
N1: (-16.068,44.984,-13.224)
N3: (-15.803,45.294,-10.847)
N6: (-14.563,45.789,-14.792)
N7: (-13.000,46.879,-12.398)
N9: (-13.774,46.546,-10.317)
O5': (-10.384,48.604,-7.414)
O3': (-11.910,44.525,-6.640)
OP2: (-8.586,48.175,-5.717)
C3': (-12.176,45.287,-7.804)
C1': (-13.835,46.615,-8.859)
C5': (-10.500,47.218,-7.701)
O4': (-12.798,47.472,-8.420)
C8: (-12.804,47.083,-11.117)
O2': (-14.458,45.296,-6.956)
C6: (-14.932,45.649,-13.516)
C5: (-14.185,46.167,-12.442)
C4: (-14.678,45.952,-11.170)
P: (-9.049,49.151,-6.727)
C4': (-11.932,46.758,-7.507)
C2': (-13.664,45.287,-8.127)
C2: (-16.425,44.853,-11.941)
N1: (-16.068,44.984,-13.224)
N3: (-15.803,45.294,-10.847)
N6: (-14.563,45.789,-14.792)
N7: (-13.000,46.879,-12.398)
N9: (-13.774,46.546,-10.317)
O5': (-10.384,48.604,-7.414)
O3': (-11.910,44.525,-6.640)
OP1: (-24.328,40.593,-16.419)
OP2: (-25.120,41.212,-14.059)
C3': (-20.185,42.310,-14.569)
C1': (-20.301,44.344,-13.428)
C5': (-22.241,42.804,-16.003)
O6: (-22.136,43.427,-7.792)
O4': (-21.214,44.409,-14.508)
C8: (-22.338,43.653,-12.070)
C2: (-19.064,44.432,-9.287)
C6: (-21.338,43.723,-8.693)
C5: (-21.559,43.751,-10.092)
C4: (-20.524,44.111,-10.924)
P: (-24.451,41.585,-15.326)
C4': (-20.939,43.318,-15.423)
C2': (-19.294,43.254,-13.774)
O2': (-18.249,43.793,-14.556)
N1: (-20.031,44.085,-8.372)
N2: (-17.859,44.753,-8.796)
N3: (-19.259,44.462,-10.596)
N7: (-22.700,43.463,-10.830)
N9: (-21.030,44.050,-12.200)
O5': (-22.992,42.145,-14.992)
O3': (-19.430,41.422,-15.378)
OP2: (-25.120,41.212,-14.059)
C3': (-20.185,42.310,-14.569)
C1': (-20.301,44.344,-13.428)
C5': (-22.241,42.804,-16.003)
O6: (-22.136,43.427,-7.792)
O4': (-21.214,44.409,-14.508)
C8: (-22.338,43.653,-12.070)
C2: (-19.064,44.432,-9.287)
C6: (-21.338,43.723,-8.693)
C5: (-21.559,43.751,-10.092)
C4: (-20.524,44.111,-10.924)
P: (-24.451,41.585,-15.326)
C4': (-20.939,43.318,-15.423)
C2': (-19.294,43.254,-13.774)
O2': (-18.249,43.793,-14.556)
N1: (-20.031,44.085,-8.372)
N2: (-17.859,44.753,-8.796)
N3: (-19.259,44.462,-10.596)
N7: (-22.700,43.463,-10.830)
N9: (-21.030,44.050,-12.200)
O5': (-22.992,42.145,-14.992)
O3': (-19.430,41.422,-15.378)
Image (generated by PyMOL):